Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14856 Sequoiadendron giganteum HOM05D003946 ORTHO05D004485 4.7e-58 227.6 114 100.0
SEGI_31472 Sequoiadendron giganteum HOM05D003946 ORTHO05D004485 2.0e-24 115.9 62 88.7
TAR625G1091 Trochodendron aralioides HOM05D003946 ORTHO05D004485 1.3e-15 86.7 65 58.5
Dinv42798 Davidia involucrata HOM05D003946 ORTHO05D004485 4.9e-15 84.7 89 49.4
Dinv43303 Davidia involucrata HOM05D003946 ORTHO05D004485 4.9e-15 84.7 89 49.4
Hma1.2p1_2732F.1_g327665 Hydrangea macrophylla HOM05D003946 ORTHO05D004485 6.4e-15 84.3 90 50.0
Nn2g14258 Nelumbo nucifera HOM05D003946 ORTHO05D004485 6.4e-15 84.3 101 43.6
Nn8g40208 Nelumbo nucifera HOM05D003946 ORTHO05D004485 1.4e-14 83.2 65 58.5
Dinv41322 Davidia involucrata HOM05D003946 ORTHO05D004485 2.4e-14 82.4 65 58.5
GSVIVG01023716001 Vitis vinifera HOM05D003946 ORTHO05D004485 4.2e-14 81.6 80 51.2
Prupe.8G039000 Prunus persica HOM05D003946 ORTHO05D004485 7.1e-14 80.9 100 44.0
Haze_21259 Corylus avellana HOM05D003946 ORTHO05D004485 2.1e-13 79.3 65 52.3
TAR636G0475 Trochodendron aralioides HOM05D003946 ORTHO05D004485 2.1e-13 79.3 65 53.8
Cfa012892 Carpinus fangiana HOM05D003946 ORTHO05D004485 2.7e-13 79.0 65 52.3
CDE04G0594 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 2.7e-13 79.0 65 50.8
TWI63G1262 Tripterygium wilfordii HOM05D003946 ORTHO05D004485 3.5e-13 78.6 65 52.3
Cpa.g.sc37.157 Carica papaya HOM05D003946 ORTHO05D004485 4.6e-13 78.2 63 55.6
AUR62039767 Chenopodium quinoa HOM05D003946 ORTHO05D004485 4.6e-13 78.2 109 42.2
CSS0017975 Camellia sinensis var. sinensis HOM05D003946 ORTHO05D004485 6.0e-13 77.8 67 49.3
Rhsim03G0261300 Rhododendron simsii HOM05D003946 ORTHO05D004485 6.0e-13 77.8 64 51.6
TWI34G0749 Tripterygium wilfordii HOM05D003946 ORTHO05D004485 6.0e-13 77.8 80 48.8
vmacro06046 Vaccinium macrocarpon HOM05D003946 ORTHO05D004485 7.9e-13 77.4 63 55.6
CSS0020287 Camellia sinensis var. sinensis HOM05D003946 ORTHO05D004485 1.0e-12 77.0 65 50.8
AUR62028392 Chenopodium quinoa HOM05D003946 ORTHO05D004485 1.0e-12 77.0 79 49.4
Medtr2g090135 Medicago truncatula HOM05D003946 ORTHO05D004485 1.0e-12 77.0 65 52.3
Duzib187G0394 Durio zibethinus HOM05D003946 ORTHO05D004485 1.3e-12 76.6 65 50.8
Duzib187G0180 Durio zibethinus HOM05D003946 ORTHO05D004485 1.8e-12 76.3 65 50.8
CDE02G3171 Ceratophyllum demersum HOM05D003946 ORTHO05D004485 2.3e-12 75.9 65 49.2
Medtr7g059150 Medicago truncatula HOM05D003946 ORTHO05D004485 2.3e-12 75.9 65 49.2
SGA_v2.0_scaffold293G47418 Striga asiatica HOM05D003946 ORTHO05D004485 2.3e-12 75.9 65 52.3
Lalb_Chr07g0193951 Lupinus albus HOM05D003946 ORTHO05D004485 3.0e-12 75.5 65 49.2
Phvul.008G125199 Phaseolus vulgaris HOM05D003946 ORTHO05D004485 3.0e-12 75.5 63 54.0
TPR.G35554 Trifolium pratense HOM05D003946 ORTHO05D004485 3.0e-12 75.5 63 52.4
MD16G1260600 Malus domestica HOM05D003946 ORTHO05D004485 3.9e-12 75.1 64 50.0
PSO210G1136 Papaver somniferum HOM05D003946 ORTHO05D004485 3.9e-12 75.1 63 55.6
Psat5g270480 Pisum sativum HOM05D003946 ORTHO05D004485 3.9e-12 75.1 65 50.8
Actinidia18308 Actinidia chinensis HOM05D003946 ORTHO05D004485 5.1e-12 74.7 63 52.4
Duzib150G0638 Durio zibethinus HOM05D003946 ORTHO05D004485 5.1e-12 74.7 65 49.2
FAN15G3651 Fragaria x ananassa HOM05D003946 ORTHO05D004485 5.1e-12 74.7 65 50.8
Manes.14G148900 Manihot esculenta HOM05D003946 ORTHO05D004485 5.1e-12 74.7 65 52.3
PSO832G3676 Papaver somniferum HOM05D003946 ORTHO05D004485 5.1e-12 74.7 63 55.6
Thecc.09G157800 Theobroma cacao HOM05D003946 ORTHO05D004485 5.1e-12 74.7 65 49.2
Gohir.A05G345884 Gossypium hirsutum HOM05D003946 ORTHO05D004485 6.7e-12 74.3 79 44.3
Prupe.1G099700 Prunus persica HOM05D003946 ORTHO05D004485 6.7e-12 74.3 100 42.0
VMungo1383G2940 Vigna mungo HOM05D003946 ORTHO05D004485 6.7e-12 74.3 63 52.4
CsaV3_2G007790 Cucumis sativus L. HOM05D003946 ORTHO05D004485 8.7e-12 73.9 65 47.7
Glyma.15G020050 Glycine max HOM05D003946 ORTHO05D004485 8.7e-12 73.9 64 51.6
arahy.Tifrunner.gnm1.ann1.5R3BA8 Arachis hypogaea HOM05D003946 ORTHO05D004485 1.1e-11 73.6 65 49.2
arahy.Tifrunner.gnm1.ann1.8RX8VY Arachis hypogaea HOM05D003946 ORTHO05D004485 1.1e-11 73.6 65 49.2
CiPaw.10G166500 Carya illinoinensis HOM05D003946 ORTHO05D004485 1.1e-11 73.6 64 51.6
ClCG11G012680 Citrullus lanatus HOM05D003946 ORTHO05D004485 1.1e-11 73.6 60 53.3
MD04G1009600 Malus domestica HOM05D003946 ORTHO05D004485 1.1e-11 73.6 63 49.2
MELO3C004108.2 Cucumis melo HOM05D003946 ORTHO05D004485 1.5e-11 73.2 65 49.2
Sed0010600 Sechium edule HOM05D003946 ORTHO05D004485 1.5e-11 73.2 125 30.4
FvH4_3g34740 Fragaria vesca HOM05D003946 ORTHO05D004485 1.9e-11 72.8 64 50.0
FAN11G0842 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.9e-11 72.8 64 50.0
FAN21G2611 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.9e-11 72.8 64 50.0
FAN27G0955 Fragaria x ananassa HOM05D003946 ORTHO05D004485 1.9e-11 72.8 64 50.0
Gohir.D04G087100 Gossypium hirsutum HOM05D003946 ORTHO05D004485 1.9e-11 72.8 79 44.3
Gorai.012G097100 Gossypium raimondii HOM05D003946 ORTHO05D004485 1.9e-11 72.8 79 44.3
Sc18g0003220 Simmondsia chinensis HOM05D003946 ORTHO05D004485 1.9e-11 72.8 67 49.3
arahy.Tifrunner.gnm1.ann1.43EHF4 Arachis hypogaea HOM05D003946 ORTHO05D004485 2.5e-11 72.4 65 49.2
Ca_01529_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 2.5e-11 72.4 65 49.2
MBI14_g28321_MAGBIO Magnolia biondii HOM05D003946 ORTHO05D004485 2.5e-11 72.4 62 53.2
Os10g0486900 Oryza sativa ssp. japonica HOM05D003946 ORTHO05D004485 2.5e-11 72.4 65 47.7
Ca_01517_v3 Cicer arietinum L. HOM05D003946 ORTHO05D004485 3.3e-11 72.0 65 49.2
Potri.018G100700 Populus trichocarpa HOM05D003946 ORTHO05D004485 4.3e-11 71.6 79 48.1
TPR.G23301 Trifolium pratense HOM05D003946 ORTHO05D004485 4.3e-11 71.6 63 47.6
QL02p094618 Quercus lobata HOM05D003946 ORTHO05D004485 5.6e-11 71.2 73 46.6
RcHm_v2.0_Chr4g0405181 Rosa chinensis HOM05D003946 ORTHO05D004485 5.6e-11 71.2 64 50.0
FAN16G0870 Fragaria x ananassa HOM05D003946 ORTHO05D004485 7.4e-11 70.9 64 50.0
PSO063G3610 Papaver somniferum HOM05D003946 ORTHO05D004485 7.4e-11 70.9 79 45.6
FAN25G1583 Fragaria x ananassa HOM05D003946 ORTHO05D004485 9.6e-11 70.5 64 48.4
Glyma.08G356700 Glycine max HOM05D003946 ORTHO05D004485 9.6e-11 70.5 63 50.8
Sed0007467 Sechium edule HOM05D003946 ORTHO05D004485 9.6e-11 70.5 65 46.2
Atru.chr7.424 Acer truncatum HOM05D003946 ORTHO05D004485 1.3e-10 70.1 63 55.6
Psat3g143400 Pisum sativum HOM05D003946 ORTHO05D004485 1.3e-10 70.1 65 47.7
PGR001G0003 Punica granatum HOM05D003946 ORTHO05D004485 1.3e-10 70.1 97 38.1
PGR044G0462 Punica granatum HOM05D003946 ORTHO05D004485 1.3e-10 70.1 97 38.1
AL7G21660 Arabidopsis lyrata HOM05D003946 ORTHO05D004485 1.6e-10 69.7 65 44.6
HanXRQChr09g0244711 Helianthus annuus HOM05D003946 ORTHO05D004485 1.6e-10 69.7 65 46.2
PSO782G1270 Papaver somniferum HOM05D003946 ORTHO05D004485 1.6e-10 69.7 79 44.3
PGSC0003DMG400011219 Solanum tuberosum HOM05D003946 ORTHO05D004485 1.6e-10 69.7 65 50.8
Aqoxy3G01561 Aquilegia oxysepala HOM05D003946 ORTHO05D004485 2.1e-10 69.3 80 48.8
Gohir.A05G007100 Gossypium hirsutum HOM05D003946 ORTHO05D004485 2.1e-10 69.3 88 44.3
Nitab4.5_0002545g0010 Nicotiana tabacum HOM05D003946 ORTHO05D004485 2.1e-10 69.3 65 50.8
Ah.09g228630 Amaranthus hybridus HOM05D003946 ORTHO05D004485 2.8e-10 68.9 77 45.5
Gohir.D05G008000 Gossypium hirsutum HOM05D003946 ORTHO05D004485 2.8e-10 68.9 62 50.0
Gorai.009G008100 Gossypium raimondii HOM05D003946 ORTHO05D004485 2.8e-10 68.9 62 50.0
Lj4g0012280 Lotus japonicus HOM05D003946 ORTHO05D004485 2.8e-10 68.9 63 47.6
Potri.006G178900 Populus trichocarpa HOM05D003946 ORTHO05D004485 2.8e-10 68.9 64 50.0
arahy.Tifrunner.gnm1.ann1.69CB9U Arachis hypogaea HOM05D003946 ORTHO05D004485 3.6e-10 68.6 65 46.2
CAN.G1190.24 Capsicum annuum HOM05D003946 ORTHO05D004485 3.6e-10 68.6 64 51.6
Solyc07g006180.3 Solanum lycopersicum HOM05D003946 ORTHO05D004485 3.6e-10 68.6 67 47.8
Sopen07g002290 Solanum pennellii HOM05D003946 ORTHO05D004485 3.6e-10 68.6 67 47.8
Zm00001eb060560 Zea mays HOM05D003946 ORTHO05D004485 3.6e-10 68.6 79 41.8
Actinidia38658 Actinidia chinensis HOM05D003946 ORTHO05D004485 4.8e-10 68.2 62 50.0
AT4G30480 Arabidopsis thaliana HOM05D003946 ORTHO05D004485 4.8e-10 68.2 62 48.4
Thhalv10000290m.g Eutrema salsugineum HOM05D003946 ORTHO05D004485 4.8e-10 68.2 78 44.9
HanXRQChr03g0065991 Helianthus annuus HOM05D003946 ORTHO05D004485 4.8e-10 68.2 65 44.6
Nitab4.5_0003269g0040 Nicotiana tabacum HOM05D003946 ORTHO05D004485 8.1e-10 67.4 65 47.7
COL.COLO4_10067 Corchorus olitorius HOM05D003946 ORTHO05D004485 1.1e-09 67.0 84 40.5
Sabra06G0135900 Salix brachista HOM05D003946 ORTHO05D004485 1.4e-09 66.6 88 42.0
Zm00001eb365370 Zea mays HOM05D003946 ORTHO05D004485 1.4e-09 66.6 65 41.5
Carub.0007s1011 Capsella rubella HOM05D003946 ORTHO05D004485 1.8e-09 66.2 64 43.8
Lj9A725T27 Lonicera japonica HOM05D003946 ORTHO05D004485 1.8e-09 66.2 64 46.9
Ah.14g084270 Amaranthus hybridus HOM05D003946 ORTHO05D004485 2.4e-09 65.9 78 42.3
Glyma.18G174600 Glycine max HOM05D003946 ORTHO05D004485 2.4e-09 65.9 56 51.8
SalBow6G3589 Salvia bowleyana HOM05D003946 ORTHO05D004485 2.4e-09 65.9 61 45.9
unitig_62.g23482 Utricularia gibba HOM05D003946 ORTHO05D004485 2.4e-09 65.9 63 42.9
AL4G13950 Arabidopsis lyrata HOM05D003946 ORTHO05D004485 3.1e-09 65.5 64 42.2
BcaB06g27947 Brassica carinata HOM05D003946 ORTHO05D004485 3.1e-09 65.5 78 42.3
Thhalv10025952m.g Eutrema salsugineum HOM05D003946 ORTHO05D004485 4.0e-09 65.1 78 39.7
BcaC02g08518 Brassica carinata HOM05D003946 ORTHO05D004485 6.9e-09 64.3 64 43.8
C04p53510 Brassica napus HOM05D003946 ORTHO05D004485 6.9e-09 64.3 64 43.8
BolC4t26905H Brassica oleracea HOM05D003946 ORTHO05D004485 6.9e-09 64.3 64 43.8
Sp4g02820 Schrenkiella parvula HOM05D003946 ORTHO05D004485 6.9e-09 64.3 78 42.3
BraA04t17439Z Brassica rapa HOM05D003946 ORTHO05D004485 9.0e-09 63.9 64 43.8
DCAR_014726 Daucus carota HOM05D003946 ORTHO05D004485 9.0e-09 63.9 89 38.2
Peaxi162Scf00038g00222 Petunia axillaris HOM05D003946 ORTHO05D004485 9.0e-09 63.9 57 56.1
CARHR238370 Cardamine hirsuta HOM05D003946 ORTHO05D004485 1.2e-08 63.5 66 42.4
Lsat_1_v5_gn_7_51160 Lactuca sativa HOM05D003946 ORTHO05D004485 1.2e-08 63.5 79 43.0
Sc18g0003210 Simmondsia chinensis HOM05D003946 ORTHO05D004485 1.2e-08 63.5 64 46.9
Migut.K00288 Erythranthe guttata HOM05D003946 ORTHO05D004485 1.5e-08 63.2 63 42.9
Aa31LG2G20050 Aethionema arabicum HOM05D003946 ORTHO05D004485 2.0e-08 62.8 64 39.1
A04p18280 Brassica napus HOM05D003946 ORTHO05D004485 2.0e-08 62.8 60 46.7
FAN12G1528 Fragaria x ananassa HOM05D003946 ORTHO05D004485 2.0e-08 62.8 63 50.8
FAN12G3120 Fragaria x ananassa HOM05D003946 ORTHO05D004485 2.0e-08 62.8 63 50.8
Cc06_g14380 Coffea canephora HOM05D003946 ORTHO05D004485 2.6e-08 62.4 78 44.9
ECA234G2728 Erigeron canadensis HOM05D004005 ORTHO05D004876 2.6e-08 62.4 108 31.5
Lsat_1_v5_gn_5_88241 Lactuca sativa HOM05D003946 ORTHO05D004485 2.6e-08 62.4 79 39.2
Pp3c8_13040 Physcomitrium patens HOM05D003946 ORTHO05D004485 1.7e-07 59.7 63 44.4
Duzib168G2206 Durio zibethinus HOM05D003946 ORTHO05D004485 2.9e-07 58.9 71 43.7
Sp7g28360 Schrenkiella parvula HOM05D003946 ORTHO05D004485 2.9e-07 58.9 64 40.6
BcaNung00558 Brassica carinata HOM05D003946 ORTHO05D004485 6.4e-07 57.8 63 39.7
C07p57950 Brassica napus HOM05D003946 ORTHO05D004485 8.4e-07 57.4 98 32.7
BolC7t46253H Brassica oleracea HOM05D003946 ORTHO05D004485 8.4e-07 57.4 98 32.7
AagrBONN_evm.TU.Sc2ySwM_117.756 Anthoceros agrestis HOM05D003946 ORTHO05D004485 1.4e-06 56.6 59 44.1
AagrBONN_evm.TU.Sc2ySwM_228.5826 Anthoceros agrestis HOM05D003946 ORTHO05D004485 1.4e-06 56.6 108 33.3
CAN.G363.9 Capsicum annuum HOM05D003946 ORTHO05D004485 1.9e-06 56.2 58 46.6


User provided reference genes

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