Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14802 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 2.6e-130 468.8 240 100.0
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 9.0e-27 124.8 65 96.9
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 5.0e-17 92.4 64 70.3
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 6.5e-17 92.0 70 64.3
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 1.4e-16 90.9 64 67.2
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 2.5e-16 90.1 64 71.9
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 4.2e-16 89.4 64 65.6
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 4.2e-16 89.4 64 65.6
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 4.2e-16 89.4 64 67.2
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 5.5e-16 89.0 64 68.8
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 5.5e-16 89.0 64 67.2
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 9.4e-16 88.2 70 64.3
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 9.4e-16 88.2 64 65.6
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 1.2e-15 87.8 64 64.1
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 1.2e-15 87.8 64 64.1
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 1.2e-15 87.8 64 60.9
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.2e-15 87.8 64 62.5
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 1.2e-15 87.8 64 65.6
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 1.6e-15 87.4 70 64.3
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 1.6e-15 87.4 64 62.5
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 1.6e-15 87.4 64 62.5
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 1.6e-15 87.4 70 62.9
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 1.6e-15 87.4 64 65.6
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 1.6e-15 87.4 64 65.6
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 64.1
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 64.1
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 64.1
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 64.1
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 65.6
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 62.5
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 64.1
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 65.6
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 2.1e-15 87.0 64 65.6
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 64.1
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 62.5
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 65.6
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 2.7e-15 86.7 68 61.8
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 64.1
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 65.6
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 2.7e-15 86.7 64 64.1
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 3.6e-15 86.3 70 62.9
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 3.6e-15 86.3 64 64.1
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 3.6e-15 86.3 64 65.6
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 4.7e-15 85.9 64 64.1
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 64.1
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 64.1
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 64.1
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 65.6
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 65.6
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 59.4
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 64.1
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 62.5
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 6.1e-15 85.5 64 64.1
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 7.9e-15 85.1 64 62.5
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 7.9e-15 85.1 64 64.1
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 7.9e-15 85.1 64 60.9
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 7.9e-15 85.1 64 64.1
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.0e-14 84.7 64 64.1
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.0e-14 84.7 64 64.1
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 1.0e-14 84.7 64 59.4
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 1.0e-14 84.7 64 64.1
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.0e-14 84.7 64 62.5
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 1.4e-14 84.3 64 65.6
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.4e-14 84.3 64 62.5
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 1.4e-14 84.3 64 62.5
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 1.8e-14 84.0 64 60.9
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 1.8e-14 84.0 64 60.9
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 2.3e-14 83.6 64 64.1
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 2.3e-14 83.6 64 59.4
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 3.0e-14 83.2 64 60.9
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 3.0e-14 83.2 64 64.1
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 3.0e-14 83.2 64 64.1
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.9e-14 82.8 64 62.5
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 3.9e-14 82.8 64 62.5
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 3.9e-14 82.8 64 62.5
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 5.1e-14 82.4 64 62.5
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 5.1e-14 82.4 64 62.5
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 5.1e-14 82.4 64 62.5
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 5.1e-14 82.4 64 62.5
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 5.1e-14 82.4 61 62.3
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 5.1e-14 82.4 64 59.4
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 6.7e-14 82.0 64 59.4
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 6.7e-14 82.0 64 59.4
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 6.7e-14 82.0 64 60.9
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 6.7e-14 82.0 64 60.9
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 6.7e-14 82.0 64 60.9
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 8.8e-14 81.6 64 60.9
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 1.1e-13 81.3 64 62.5
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 1.1e-13 81.3 63 61.9
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 1.5e-13 80.9 64 62.5
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 1.5e-13 80.9 64 62.5
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 1.5e-13 80.9 65 64.6
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.5e-13 80.9 64 57.8
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 1.5e-13 80.9 64 57.8
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 3.3e-13 79.7 64 62.5
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 4.4e-13 79.3 64 56.2
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 4.4e-13 79.3 64 57.8
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 5.7e-13 79.0 64 62.5
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 5.7e-13 79.0 64 59.4
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 7.4e-13 78.6 106 43.4
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 7.4e-13 78.6 64 59.4
Nn1g00187 Nelumbo nucifera HOM05D002388 ORTHO05D008833 7.4e-13 78.6 57 64.9
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 7.4e-13 78.6 64 60.9
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.3e-12 77.8 64 57.8
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 1.7e-12 77.4 61 59.0
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 1.7e-12 77.4 64 59.4
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.1e-07 60.5 64 53.1
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.4e-06 57.8 36 72.2
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.3e-06 57.0 64 46.9
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 6.7e-06 55.5 34 73.5


User provided reference genes

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