Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14764 Sequoiadendron giganteum HOM05D008466 ORTHO05D010817 3.5e-219 764.6 373 100.0
ATMG00285 Arabidopsis thaliana HOM05D008466 ORTHO05D010817 4.8e-75 285.8 182 83.0
BolSC28t60321H Brassica oleracea HOM05D008466 ORTHO05D010817 2.7e-54 216.9 151 77.5
BraSC48t46287Z Brassica rapa HOM05D008466 ORTHO05D010817 2.7e-54 216.9 151 77.5
BraSC48t46336Z Brassica rapa HOM05D008466 ORTHO05D010817 2.7e-54 216.9 151 77.5
Lalb_Chr00c21g0406001 Lupinus albus HOM05D008466 ORTHO05D010817 7.9e-54 215.3 148 78.4
Nitab4.5_0014136g0010 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.3e-53 214.5 316 45.9
A04p09550 Brassica napus HOM05D008466 ORTHO05D010817 3.0e-53 213.4 142 79.6
LjContig00315g0013151 Lotus japonicus HOM05D008466 ORTHO05D010817 1.5e-52 211.1 142 78.9
Nitab4.5_0002325g0090 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.9e-52 210.7 232 55.2
Potri.007G062442 Populus trichocarpa HOM05D008466 ORTHO05D010817 3.7e-51 206.5 148 76.4
Nitab4.5_0010033g0120 Nicotiana tabacum HOM05D008466 ORTHO05D010817 3.4e-49 199.9 142 74.6
Glyma.01G136900 Glycine max HOM05D008466 ORTHO05D010817 5.0e-48 196.1 146 70.5
Nitab4.5_0000172g1700 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.9e-47 194.1 253 49.4
Nitab4.5_0000031g0180 Nicotiana tabacum HOM05D008466 ORTHO05D011423 1.6e-46 191.0 297 43.4
CDE02G0407 Ceratophyllum demersum HOM05D008466 ORTHO05D010817 1.1e-42 178.3 126 77.0
Peaxi162Scf00651g00634 Petunia axillaris HOM05D008466 ORTHO05D010817 5.0e-40 169.5 186 57.0
BolSC28t60423H Brassica oleracea HOM05D008466 ORTHO05D010817 1.4e-37 161.4 121 72.7
Nitab4.5_0008578g0050 Nicotiana tabacum HOM05D008466 ORTHO05D011423 2.0e-36 157.5 205 48.3
TPR.G7441 Trifolium pratense HOM05D008466 ORTHO05D010817 4.4e-36 156.4 104 79.8
Gorai.001G167700 Gossypium raimondii HOM05D008466 ORTHO05D010817 4.8e-35 152.9 168 54.2
CiPaw.11G081100 Carya illinoinensis HOM05D008466 ORTHO05D010817 5.0e-32 142.9 90 83.3
Lalb_Chr00c39g0409011 Lupinus albus HOM05D008466 ORTHO05D010817 6.5e-32 142.5 92 80.4
Lalb_Chr00c39g0409191 Lupinus albus HOM05D008466 ORTHO05D010817 6.5e-32 142.5 92 80.4
Lalb_Chr18g0049571 Lupinus albus HOM05D008466 ORTHO05D010817 6.5e-32 142.5 92 80.4
Nitab4.5_0000580g0160 Nicotiana tabacum HOM05D008466 ORTHO05D010817 4.2e-31 139.8 100 74.0
Nitab4.5_0001952g0260 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.4e-29 134.8 199 44.2
SalBow1G0863 Salvia bowleyana HOM05D008466 ORTHO05D010817 3.0e-29 133.7 98 74.5
Zm00001eb187490 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
Zm00001eb436220 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
Zm00001eb436270 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
Zm00001eb436350 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
Zm00001eb436460 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
Zm00001eb436500 Zea mays HOM05D008466 ORTHO05D010817 5.2e-29 132.9 90 78.9
VMungo0565G0006 Vigna mungo HOM05D008466 ORTHO05D010817 1.5e-28 131.3 84 82.1
Nitab4.5_0001796g0330 Nicotiana tabacum HOM05D008466 ORTHO05D010817 1.3e-27 128.3 100 69.0
Mapoly0157s0028 Marchantia polymorpha HOM05D008466 ORTHO05D010817 4.1e-26 123.2 86 76.7
Medtr8g059750 Medicago truncatula HOM05D008466 ORTHO05D010817 8.5e-24 115.5 96 67.7
arahy.Tifrunner.gnm1.ann1.48KRUQ Arachis hypogaea HOM05D008466 ORTHO05D010817 1.5e-23 114.8 73 82.2
Medtr2g040780 Medicago truncatula HOM05D008466 ORTHO05D010817 7.2e-23 112.5 73 80.8
RcHm_v2.0_MTg0498181 Rosa chinensis HOM05D008466 ORTHO05D010817 1.5e-20 104.8 66 83.3
FvH4_c1g00520 Fragaria vesca HOM05D008923 ORTHO05D011423 1.0e-16 92.0 52 86.5
Hma1.2p1_0335F.1_g128880 Hydrangea macrophylla HOM05D008923 ORTHO05D011423 1.0e-16 92.0 52 86.5
SalBow1G1510 Salvia bowleyana HOM05D008923 ORTHO05D011423 1.0e-16 92.0 52 86.5
GSVIVG01004963001 Vitis vinifera HOM05D008923 ORTHO05D011423 1.7e-16 91.3 52 86.5
arahy.Tifrunner.gnm1.ann1.GWEJ34 Arachis hypogaea HOM05D008466 ORTHO05D010817 2.9e-16 90.5 58 82.8
VMungo0565G0002 Vigna mungo HOM05D008923 ORTHO05D011423 3.8e-16 90.1 51 86.3
RhsimMtG0002900 Rhododendron simsii HOM05D008923 ORTHO05D011423 8.5e-16 89.0 51 86.3
Sopen00g002560 Solanum pennellii HOM05D008923 ORTHO05D011423 8.5e-16 89.0 51 86.3
HanXRQMTg0579461 Helianthus annuus HOM05D008923 ORTHO05D011423 1.5e-15 88.2 51 86.3
Nitab4.5_0001796g0310 Nicotiana tabacum HOM05D008923 ORTHO05D011423 1.5e-15 88.2 64 68.8
Psat0s2778g0120 Pisum sativum HOM05D008923 ORTHO05D011423 1.5e-15 88.2 51 86.3
Ca_04597_v3 Cicer arietinum L. HOM05D008923 ORTHO05D013768 1.9e-15 87.8 52 82.7
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 3.2e-15 87.0 180 36.7
ATR0480G001 Amborella trichopoda HOM05D008923 ORTHO05D011423 7.2e-15 85.9 52 82.7
SHI54298 Sapria himalayana HOM05D008923 ORTHO05D011423 1.8e-13 81.3 61 70.5
Gohir.D08G087750 Gossypium hirsutum HOM05D008923 ORTHO05D011423 2.3e-13 80.9 59 71.2
FAN20G1591 Fragaria x ananassa HOM05D008923 ORTHO05D011423 6.8e-13 79.3 45 84.4
Gohir.D02G091950 Gossypium hirsutum HOM05D008923 ORTHO05D011423 6.8e-13 79.3 59 67.8
Nitab4.5_0000925g0080 Nicotiana tabacum HOM05D008923 ORTHO05D011423 2.6e-12 77.4 54 70.4
BraSC48t46301Z Brassica rapa HOM05D008466 ORTHO05D010817 3.4e-12 77.0 52 73.1
Gorai.005G103300 Gossypium raimondii HOM05D008923 ORTHO05D011423 5.7e-12 76.3 59 67.8
LjContig00319g0001918 Lotus japonicus HOM05D000729 ORTHO05D001063 1.4e-10 71.6 232 25.4
SHI26553 Sapria himalayana HOM05D008923 ORTHO05D011423 3.1e-10 70.5 52 73.1
Carub.0006s2655 Capsella rubella HOM05D008466 ORTHO05D010817 9.1e-10 68.9 49 71.4
Gohir.D08G147600 Gossypium hirsutum HOM05D000729 ORTHO05D001063 9.1e-10 68.9 178 29.2
SMO310G0006 Selaginella moellendorffii HOM05D006493 ORTHO05D009864 9.1e-10 68.9 126 40.5
Medtr3g035660 Medicago truncatula HOM05D000729 ORTHO05D001063 2.7e-09 67.4 212 27.4
MBI08_g16748_MAGBIO Magnolia biondii HOM05D008923 ORTHO05D011423 1.0e-08 65.5 52 69.2
Os04g0473025 Oryza sativa ssp. japonica HOM05D000729 ORTHO05D001063 1.0e-08 65.5 155 31.6
EL10As15g24113 Beta vulgaris HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 27.5
CiPaw.03G002000 Carya illinoinensis HOM05D000729 ORTHO05D001063 2.9e-08 63.9 205 25.9
Gohir.D01G101826 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.9e-08 63.9 197 27.4
HanXRQChr00c0264g0572891 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr00c0434g0574661 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr01g0020151 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr02g0059631 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr05g0152351 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr05g0152491 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr07g0194901 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr10g0284481 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr10g0317951 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr11g0321181 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr11g0327111 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr11g0333791 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQChr17g0569661 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQCPg0580271 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
HanXRQCPg0580451 Helianthus annuus HOM05D000729 ORTHO05D001063 2.9e-08 63.9 178 28.1
C06p23140 Brassica napus HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BolC2t10586H Brassica oleracea HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BolSC29t60627H Brassica oleracea HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BolSC35t60718H Brassica oleracea HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BolSC49t61156H Brassica oleracea HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BolSC49t61215H Brassica oleracea HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BraSC103t45493Z Brassica rapa HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BraSC138t45543Z Brassica rapa HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
BraSC58t46449Z Brassica rapa HOM05D000729 ORTHO05D001063 3.8e-08 63.5 203 28.6
Migut.F01470 Erythranthe guttata HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
HanXRQChr09g0249681 Helianthus annuus HOM05D000729 ORTHO05D001063 3.8e-08 63.5 183 28.4
Hma1.2p1_0052F.1_g030753 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 3.8e-08 63.5 197 27.4
Hma1.2p1_0052F.1_g030756 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
Hma1.2p1_1244F.1_g270050 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
Hma1.2p1_1244F.1_g270060 Hydrangea macrophylla HOM05D000729 ORTHO05D001063 3.8e-08 63.5 197 27.4
SalBow1G3941 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
SalBow1G4562 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
SalBow1G6647 Salvia bowleyana HOM05D000729 ORTHO05D001063 3.8e-08 63.5 178 27.5
PGR111G0104 Punica granatum HOM05D000729 ORTHO05D001063 6.6e-08 62.8 197 27.4
PGR111G0125 Punica granatum HOM05D000729 ORTHO05D001063 6.6e-08 62.8 197 27.4
arahy.Tifrunner.gnm1.ann1.984MHU Arachis hypogaea HOM05D000729 ORTHO05D001063 8.6e-08 62.4 198 29.3
Thhalv10011731m.g Eutrema salsugineum HOM05D000729 ORTHO05D001063 8.6e-08 62.4 203 28.6
PSO548G0058 Papaver somniferum HOM05D000729 ORTHO05D001063 8.6e-08 62.4 178 27.5
PSO548G0065 Papaver somniferum HOM05D000729 ORTHO05D001063 8.6e-08 62.4 178 27.5
Potri.013G139112 Populus trichocarpa HOM05D000729 ORTHO05D001063 8.6e-08 62.4 197 27.4
Nitab4.5_0004920g0010 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.1e-07 62.0 184 28.8
Psat5g286120 Pisum sativum HOM05D000729 ORTHO05D001063 1.1e-07 62.0 110 31.8
Potri.011G075051 Populus trichocarpa HOM05D000729 ORTHO05D001063 1.1e-07 62.0 178 26.4
Hund07988 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund08790 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund22780 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund27635 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund27858 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund27885 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund27921 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 178 27.0
Hund27951 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund28172 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund28540 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund28970 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund29048 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund29105 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund29118 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund29149 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
Hund29155 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.1e-07 62.0 197 26.9
arahy.Tifrunner.gnm1.ann1.KE24QQ Arachis hypogaea HOM05D000729 ORTHO05D001063 1.5e-07 61.6 134 31.3
C06p21330 Brassica napus HOM05D000729 ORTHO05D001063 1.5e-07 61.6 185 29.2
Gohir.A09G045500 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 27.4
Gohir.A09G093100 Gossypium hirsutum HOM05D000729 ORTHO05D001063 1.5e-07 61.6 178 28.1
Nn029s41588 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Nn031s41603 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Nn206s45069 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Nn219s45284 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Nn233s45561 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Nn269s46005 Nelumbo nucifera HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
Hund03965 Selenicereus undatus HOM05D000729 ORTHO05D001063 1.5e-07 61.6 197 26.9
EL10Ac5g11886 Beta vulgaris HOM05D000729 ORTHO05D001063 1.9e-07 61.2 160 27.5
BolC7t41702H Brassica oleracea HOM05D000729 ORTHO05D001063 1.9e-07 61.2 110 30.9
BolSC47t61056H Brassica oleracea HOM05D000729 ORTHO05D001063 1.9e-07 61.2 110 30.9
BolSC49t61130H Brassica oleracea HOM05D000729 ORTHO05D001063 1.9e-07 61.2 110 30.9
BraSC59t46561Z Brassica rapa HOM05D000729 ORTHO05D001063 1.9e-07 61.2 110 30.9
Eucgr.I01854 Eucalyptus grandis HOM05D000729 ORTHO05D001063 1.9e-07 61.2 197 26.9
HanXRQChr13g0416581 Helianthus annuus HOM05D000729 ORTHO05D001063 1.9e-07 61.2 160 28.1
Nitab4.5_0012234g0040 Nicotiana tabacum HOM05D000729 ORTHO05D001063 1.9e-07 61.2 160 28.1
PSO357G0279 Papaver somniferum HOM05D000729 ORTHO05D001063 1.9e-07 61.2 178 27.5
RcHm_v2.0_CPg0501741 Rosa chinensis HOM05D000729 ORTHO05D001063 1.9e-07 61.2 197 27.4
RcHm_v2.0_CPg0502671 Rosa chinensis HOM05D000729 ORTHO05D001063 1.9e-07 61.2 197 27.4
Gohir.A05G306433 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.5e-07 60.8 197 26.4
Gohir.A05G307266 Gossypium hirsutum HOM05D000729 ORTHO05D001063 2.5e-07 60.8 110 31.8
RcHm_v2.0_Chr5g0051091 Rosa chinensis HOM05D000729 ORTHO05D001063 2.5e-07 60.8 197 27.4
Hund10279 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.5e-07 60.8 110 30.0
Hund31224 Selenicereus undatus HOM05D000729 ORTHO05D001063 2.5e-07 60.8 110 30.0
BolSC45t60896H Brassica oleracea HOM05D000729 ORTHO05D001063 3.3e-07 60.5 150 29.3
DCAR_032530 Daucus carota HOM05D000729 ORTHO05D001063 3.3e-07 60.5 178 27.0
DCAR_032546 Daucus carota HOM05D000729 ORTHO05D001063 3.3e-07 60.5 178 27.0
Aqoxy4G02024 Aquilegia oxysepala HOM05D000729 ORTHO05D001063 4.2e-07 60.1 110 30.9
RcHm_v2.0_Chr2g0118391 Rosa chinensis HOM05D000729 ORTHO05D001063 4.2e-07 60.1 164 30.5
Sed0008128 Sechium edule HOM05D000729 ORTHO05D001063 4.2e-07 60.1 197 26.9
HanXRQChr00c0634g0576581 Helianthus annuus HOM05D000729 ORTHO05D001063 7.2e-07 59.3 117 32.5
Phvul.002G090555 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 7.2e-07 59.3 107 30.8
Phvul.003G089802 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 7.2e-07 59.3 184 26.1
Phvul.009G090272 Phaseolus vulgaris HOM05D000729 ORTHO05D001063 7.2e-07 59.3 184 26.1
EL10As12g24040 Beta vulgaris HOM05D000729 ORTHO05D001063 1.2e-06 58.5 128 29.7
HanXRQChr13g0399651 Helianthus annuus HOM05D000729 ORTHO05D001063 1.2e-06 58.5 160 28.1
HanXRQChr08g0230001 Helianthus annuus HOM05D000729 ORTHO05D001063 1.6e-06 58.2 99 34.3
HanXRQChr12g0369921 Helianthus annuus HOM05D000729 ORTHO05D001063 2.8e-06 57.4 173 28.3
Lalb_Chr07g0191631 Lupinus albus HOM05D000729 ORTHO05D001063 2.8e-06 57.4 184 26.1
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 2.8e-06 57.4 71 42.3
Medtr1g088510 Medicago truncatula HOM05D000729 ORTHO05D001063 3.6e-06 57.0 74 39.2
Nitab4.5_0000174g0030 Nicotiana tabacum HOM05D000729 ORTHO05D001063 4.7e-06 56.6 123 27.6


User provided reference genes

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