Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14736 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 2.2e-109 399.1 213 100.0
SEGI_02233 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 8.0e-51 204.5 176 67.0
SEGI_23005 Sequoiadendron giganteum HOM05D000169 ORTHO05D004780 8.0e-51 204.5 176 67.0
Nn2g11670 Nelumbo nucifera HOM05D000169 ORTHO05D004780 8.6e-13 78.2 177 34.5
SMO203G0257 Selaginella moellendorffii HOM05D000169 ORTHO05D004780 4.3e-12 75.9 176 29.5
Aqoxy7G01575 Aquilegia oxysepala HOM05D000169 ORTHO05D004780 7.3e-12 75.1 176 30.1
CiPaw.01G235100 Carya illinoinensis HOM05D000169 ORTHO05D004780 7.3e-12 75.1 176 34.1
Carub.0003s1591 Capsella rubella HOM05D000169 ORTHO05D004780 2.1e-11 73.6 198 29.3
MBI01_g30862_MAGBIO Magnolia biondii HOM05D000169 ORTHO05D004780 3.6e-11 72.8 177 29.9
AL3G28850 Arabidopsis lyrata HOM05D000169 ORTHO05D004780 4.7e-11 72.4 188 28.7
TAR624G1376 Trochodendron aralioides HOM05D000169 ORTHO05D004780 4.7e-11 72.4 176 29.5
Sabra01G0154600 Salix brachista HOM05D000169 ORTHO05D004780 8.1e-11 71.6 185 29.2
TWI75G0003 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 8.1e-11 71.6 176 29.5
Actinidia32723 Actinidia chinensis HOM05D005761 ORTHO05D007286 1.1e-10 71.2 180 30.0
BraA05t22158Z Brassica rapa HOM05D000169 ORTHO05D004780 1.4e-10 70.9 197 28.4
TWI12G1479 Tripterygium wilfordii HOM05D000169 ORTHO05D004780 1.4e-10 70.9 176 29.0
AT3G16170 Arabidopsis thaliana HOM05D000169 ORTHO05D004780 1.8e-10 70.5 196 28.6
Pp3c1_9430 Physcomitrium patens HOM05D000169 ORTHO05D004780 1.8e-10 70.5 161 31.1
THA.LOC104817978 Tarenaya hassleriana HOM05D000169 ORTHO05D004780 1.8e-10 70.5 181 27.6
vmacro18881 Vaccinium macrocarpon HOM05D000169 ORTHO05D004780 2.3e-10 70.1 176 29.5
Actinidia21686 Actinidia chinensis HOM05D000169 ORTHO05D004780 3.1e-10 69.7 179 28.5
Manes.11G037400 Manihot esculenta HOM05D000169 ORTHO05D004780 3.1e-10 69.7 176 30.7
A05p33330 Brassica napus HOM05D000169 ORTHO05D004780 4.0e-10 69.3 181 28.2
CARHR091330 Cardamine hirsuta HOM05D000169 ORTHO05D004780 5.2e-10 68.9 198 28.8
Haze_16349 Corylus avellana HOM05D000169 ORTHO05D004780 5.2e-10 68.9 176 33.0
Cfa002101 Carpinus fangiana HOM05D000169 ORTHO05D004780 8.9e-10 68.2 177 32.8
Thhalv10020466m.g Eutrema salsugineum HOM05D000169 ORTHO05D004780 8.9e-10 68.2 176 29.5
Gohir.A10G081900 Gossypium hirsutum HOM05D000169 ORTHO05D004780 8.9e-10 68.2 72 48.6
RcHm_v2.0_Chr2g0139171 Rosa chinensis HOM05D000169 ORTHO05D004780 8.9e-10 68.2 181 29.3
ATR0315G057 Amborella trichopoda HOM05D000169 ORTHO05D004780 1.2e-09 67.8 179 29.1
Migut.I00934 Erythranthe guttata HOM05D000169 ORTHO05D004780 1.2e-09 67.8 177 28.8
COL.COLO4_30442 Corchorus olitorius HOM05D000169 ORTHO05D004780 1.5e-09 67.4 177 29.9
BolC1t04779H Brassica oleracea HOM05D000169 ORTHO05D004780 2.0e-09 67.0 179 28.5
Gohir.D10G069600 Gossypium hirsutum HOM05D000169 ORTHO05D004780 2.0e-09 67.0 72 48.6
Gorai.011G073700 Gossypium raimondii HOM05D000169 ORTHO05D004780 2.0e-09 67.0 72 48.6
Sp3g14530 Schrenkiella parvula HOM05D000169 ORTHO05D004780 2.0e-09 67.0 197 28.4
Ca_20416_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 2.6e-09 66.6 53 56.6
Pp3c19_10110 Physcomitrium patens HOM05D000169 ORTHO05D004780 2.6e-09 66.6 48 60.4
Potri.001G185500 Populus trichocarpa HOM05D000169 ORTHO05D004780 2.6e-09 66.6 176 29.5
Hund06638 Selenicereus undatus HOM05D000169 ORTHO05D004780 4.4e-09 65.9 178 29.2
Thecc.06G093200 Theobroma cacao HOM05D000169 ORTHO05D004780 4.4e-09 65.9 178 28.1
BcaB07g30448 Brassica carinata HOM05D000169 ORTHO05D004780 5.8e-09 65.5 51 60.8
BraA01t03853Z Brassica rapa HOM05D000169 ORTHO05D004780 5.8e-09 65.5 181 27.6
DCAR_026335 Daucus carota HOM05D000169 ORTHO05D004780 5.8e-09 65.5 52 57.7
Duzib160G0343 Durio zibethinus HOM05D000169 ORTHO05D004780 5.8e-09 65.5 60 56.7
Oeu033511.1 Olea europaea HOM05D000169 ORTHO05D004780 5.8e-09 65.5 176 28.4
BolC5t33782H Brassica oleracea HOM05D000169 ORTHO05D004780 7.5e-09 65.1 185 27.6
CiPaw.02G148300 Carya illinoinensis HOM05D000169 ORTHO05D004780 7.5e-09 65.1 178 28.1
MD17G1190300 Malus domestica HOM05D000169 ORTHO05D004780 7.5e-09 65.1 49 61.2
Aa31LG8G3300 Aethionema arabicum HOM05D000169 ORTHO05D004780 9.8e-09 64.7 176 27.8
Medtr4g011790 Medicago truncatula HOM05D000169 ORTHO05D004780 9.8e-09 64.7 49 61.2
Psat7g253800 Pisum sativum HOM05D000169 ORTHO05D004780 9.8e-09 64.7 49 61.2
TPR.G27504 Trifolium pratense HOM05D000169 ORTHO05D004780 9.8e-09 64.7 49 61.2
TPR.G38605 Trifolium pratense HOM05D000169 ORTHO05D004780 9.8e-09 64.7 49 61.2
Eucgr.J02955 Eucalyptus grandis HOM05D000169 ORTHO05D004780 1.3e-08 64.3 178 27.0
QL05p021511 Quercus lobata HOM05D000169 ORTHO05D004780 1.3e-08 64.3 48 62.5
VMungo0331G1448 Vigna mungo HOM05D000169 ORTHO05D004780 1.3e-08 64.3 181 28.2
BcaB07g30450 Brassica carinata HOM05D000169 ORTHO05D004780 1.7e-08 63.9 51 58.8
ECA232G3766 Erigeron canadensis HOM05D000169 ORTHO05D004780 1.7e-08 63.9 49 59.2
HanXRQChr16g0500801 Helianthus annuus HOM05D000169 ORTHO05D004780 1.7e-08 63.9 50 58.0
arahy.Tifrunner.gnm1.ann1.4P55VP Arachis hypogaea HOM05D000169 ORTHO05D004780 2.2e-08 63.5 53 56.6
arahy.Tifrunner.gnm1.ann1.5X7XAP Arachis hypogaea HOM05D000169 ORTHO05D004780 2.2e-08 63.5 53 56.6
EL10Ac9g22056 Beta vulgaris HOM05D000169 ORTHO05D004780 2.2e-08 63.5 178 27.0
A01p37930 Brassica napus HOM05D000169 ORTHO05D004780 2.2e-08 63.5 181 26.5
C05p50330 Brassica napus HOM05D000169 ORTHO05D004780 2.2e-08 63.5 49 59.2
CANSAT56G0566 Cannabis sativa HOM05D000169 ORTHO05D004780 2.2e-08 63.5 48 60.4
CAN.G438.32 Capsicum annuum HOM05D000169 ORTHO05D004780 2.2e-08 63.5 50 56.0
MD09G1208800 Malus domestica HOM05D000169 ORTHO05D004780 2.2e-08 63.5 48 62.5
Prupe.3G065200 Prunus persica HOM05D000169 ORTHO05D004780 2.2e-08 63.5 48 60.4
CSS0039624 Camellia sinensis var. sinensis HOM05D000169 ORTHO05D004780 2.9e-08 63.2 48 60.4
Cpa.g.c28291.1 Carica papaya HOM05D000169 ORTHO05D004780 2.9e-08 63.2 48 62.5
FvH4_6g31860 Fragaria vesca HOM05D000169 ORTHO05D004780 2.9e-08 63.2 51 56.9
FAN05G1415 Fragaria x ananassa HOM05D000169 ORTHO05D004780 2.9e-08 63.2 48 60.4
FAN14G0873 Fragaria x ananassa HOM05D000169 ORTHO05D004780 2.9e-08 63.2 51 56.9
Mapoly0036s0029 Marchantia polymorpha HOM05D000169 ORTHO05D004780 2.9e-08 63.2 176 28.4
Nitab4.5_0001315g0060 Nicotiana tabacum HOM05D000169 ORTHO05D004780 2.9e-08 63.2 48 58.3
Phvul.010G148300 Phaseolus vulgaris HOM05D000169 ORTHO05D004780 2.9e-08 63.2 180 27.2
unitig_748.g7432 Utricularia gibba HOM05D000169 ORTHO05D004780 2.9e-08 63.2 48 58.3
GSVIVG01017056001 Vitis vinifera HOM05D000169 ORTHO05D004780 2.9e-08 63.2 176 29.0
Ah.01g021720 Amaranthus hybridus HOM05D000169 ORTHO05D004780 3.7e-08 62.8 49 59.2
Lj5A57T75 Lonicera japonica HOM05D000169 ORTHO05D004780 3.7e-08 62.8 48 60.4
Nitab4.5_0001968g0110 Nicotiana tabacum HOM05D000169 ORTHO05D004780 3.7e-08 62.8 67 50.7
Oeu000461.2 Olea europaea HOM05D000169 ORTHO05D004780 3.7e-08 62.8 73 43.8
Psat3g156160 Pisum sativum HOM05D000169 ORTHO05D004780 3.7e-08 62.8 49 61.2
TPR.G5245 Trifolium pratense HOM05D000169 ORTHO05D004780 3.7e-08 62.8 53 52.8
Ca_20370_v3 Cicer arietinum L. HOM05D000169 ORTHO05D004780 4.9e-08 62.4 58 53.4
Nitab4.5_0011683g0010 Nicotiana tabacum HOM05D000169 ORTHO05D004780 4.9e-08 62.4 48 58.3
ClCG10G006410 Citrullus lanatus HOM05D000169 ORTHO05D004780 6.4e-08 62.0 48 58.3
MELO3C016565.2 Cucumis melo HOM05D000169 ORTHO05D004780 6.4e-08 62.0 48 58.3
CsaV3_3G005890 Cucumis sativus L. HOM05D000169 ORTHO05D004780 6.4e-08 62.0 48 58.3
Zm00001eb152410 Zea mays HOM05D000169 ORTHO05D004780 6.4e-08 62.0 48 56.2
BcaB06g25712 Brassica carinata HOM05D000169 ORTHO05D004780 8.3e-08 61.6 48 58.3
Nitab4.5_0002859g0130 Nicotiana tabacum HOM05D000169 ORTHO05D004780 8.3e-08 61.6 67 49.3
Cpa.g.sc296.4 Carica papaya HOM05D000169 ORTHO05D004780 1.1e-07 61.2 49 57.1
AUR62011680 Chenopodium quinoa HOM05D000169 ORTHO05D004780 1.1e-07 61.2 178 27.5
Lsat_1_v5_gn_4_103101 Lactuca sativa HOM05D000169 ORTHO05D004780 1.1e-07 61.2 73 43.8
AUR62016505 Chenopodium quinoa HOM05D000169 ORTHO05D004780 1.4e-07 60.8 179 26.8
Glyma.07G019100 Glycine max HOM05D000169 ORTHO05D004780 1.4e-07 60.8 49 57.1
Mapoly0003s0295 Marchantia polymorpha HOM05D000169 ORTHO05D004780 1.4e-07 60.8 50 56.0
Psat1g148000 Pisum sativum HOM05D005005 ORTHO05D004359 1.4e-07 60.8 60 53.3
SHI18051 Sapria himalayana HOM05D000169 ORTHO05D004780 1.4e-07 60.8 125 34.4
Sed0000326 Sechium edule HOM05D000169 ORTHO05D004780 1.4e-07 60.8 48 56.2
Sc15g0002130 Simmondsia chinensis HOM05D000169 ORTHO05D004780 1.4e-07 60.8 48 54.2
HPP92_024579 Vanilla planifolia HOM05D000169 ORTHO05D004780 1.4e-07 60.8 140 34.3
Medtr4g013210 Medicago truncatula HOM05D000169 ORTHO05D004780 1.9e-07 60.5 53 50.9
Psat1g148040 Pisum sativum HOM05D005005 ORTHO05D006178 1.9e-07 60.5 60 50.0
Psat7g253640 Pisum sativum HOM05D000169 ORTHO05D004780 1.9e-07 60.5 48 58.3
PGSC0003DMG400026465 Solanum tuberosum HOM05D000169 ORTHO05D004780 1.9e-07 60.5 47 55.3
TAR636G0874 Trochodendron aralioides HOM05D000169 ORTHO05D004780 1.9e-07 60.5 176 27.3
Hma1.2p1_1195F.1_g265900 Hydrangea macrophylla HOM05D000169 ORTHO05D004780 2.4e-07 60.1 48 54.2
PSO566G0043 Papaver somniferum HOM05D000169 ORTHO05D004780 2.4e-07 60.1 49 53.1
Psat7g158320 Pisum sativum HOM05D005005 ORTHO05D006178 2.4e-07 60.1 61 50.8
Solyc12g044290.2 Solanum lycopersicum HOM05D000169 ORTHO05D004780 2.4e-07 60.1 46 56.5
CAN.G144.5 Capsicum annuum HOM05D000169 ORTHO05D004780 3.2e-07 59.7 47 55.3
Cc04_g02960 Coffea canephora HOM05D000169 ORTHO05D004780 3.2e-07 59.7 48 56.2
Peaxi162Scf00015g00126 Petunia axillaris HOM05D000169 ORTHO05D004780 3.2e-07 59.7 44 61.4
Psat2g140280 Pisum sativum HOM05D005005 ORTHO05D006178 3.2e-07 59.7 60 51.7
SGA_v2.0_scaffold5G02549 Striga asiatica HOM05D000169 ORTHO05D004780 3.2e-07 59.7 47 57.4
Lalb_Chr25g0280011 Lupinus albus HOM05D000169 ORTHO05D004780 4.1e-07 59.3 53 49.1
PSO782G1073 Papaver somniferum HOM05D000169 ORTHO05D004780 4.1e-07 59.3 49 53.1
MSTRG.11049 Avicennia marina HOM05D000169 ORTHO05D004780 5.4e-07 58.9 46 56.5
CDE05G2910 Ceratophyllum demersum HOM05D000169 ORTHO05D004780 5.4e-07 58.9 48 56.2
Peaxi162Scf00034g00413 Petunia axillaris HOM05D000169 ORTHO05D004780 5.4e-07 58.9 48 54.2
Psat3g110240 Pisum sativum HOM05D005316 ORTHO05D017863 5.4e-07 58.9 49 53.1
SalBow2G1665 Salvia bowleyana HOM05D000169 ORTHO05D004780 5.4e-07 58.9 46 56.5
Glyma.08G204300 Glycine max HOM05D000169 ORTHO05D004780 7.1e-07 58.5 49 53.1
Ciclev10025185m.g Citrus clementina HOM05D000169 ORTHO05D004780 9.2e-07 58.2 46 56.5
Psat2g140320 Pisum sativum HOM05D005005 ORTHO05D004780 9.2e-07 58.2 60 50.0
Lj3g0027736 Lotus japonicus HOM05D000169 ORTHO05D004780 1.2e-06 57.8 46 58.7
Atru.chr1.3409_Atru.chr1.3410 Acer truncatum HOM05D000169 ORTHO05D004780 2.7e-06 56.6 181 24.9
Lsat_1_v5_gn_3_30240 Lactuca sativa HOM05D000169 ORTHO05D004780 2.7e-06 56.6 49 53.1
Nitab4.5_0003054g0020 Nicotiana tabacum HOM05D000169 ORTHO05D004780 6.0e-06 55.5 48 54.2


User provided reference genes

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