Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.2e-165 585.5 288 100.0
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 5.7e-28 129.0 239 34.7
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.3e-27 127.9 269 34.6
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 4.9e-27 125.9 227 34.8
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 2.4e-26 123.6 228 37.7
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 7.0e-26 122.1 229 34.5
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 9.2e-26 121.7 170 42.4
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 3.5e-25 119.8 276 34.4
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 4.6e-25 119.4 212 40.6
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 7.8e-25 118.6 274 32.5
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.3e-24 117.9 126 47.6
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 1.7e-24 117.5 228 33.8
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 3.0e-24 116.7 134 44.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 3.0e-24 116.7 198 35.4
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 3.9e-24 116.3 171 42.7
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 5.0e-24 115.9 122 46.7
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 6.6e-24 115.5 231 35.1
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 8.6e-24 115.2 226 35.4
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 8.6e-24 115.2 220 35.9
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 1.1e-23 114.8 154 44.2
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 1.5e-23 114.4 181 38.7
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 1.5e-23 114.4 128 46.1
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 1.5e-23 114.4 121 47.9
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.9e-23 114.0 124 45.2
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 1.9e-23 114.0 224 35.3
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 4.3e-23 112.8 123 49.6
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 7.3e-23 112.1 123 48.8
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 9.5e-23 111.7 122 49.2
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 9.5e-23 111.7 197 38.6
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 1.2e-22 111.3 221 34.4
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 2.1e-22 110.5 153 41.2
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.8e-22 110.2 194 37.6
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.8e-22 110.2 228 35.5
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 3.6e-22 109.8 139 43.2
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 4.7e-22 109.4 122 44.3
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 6.2e-22 109.0 191 36.1
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 8.0e-22 108.6 122 45.1
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.0e-21 108.2 181 37.6
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.0e-21 108.2 194 37.1
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 1.8e-21 107.5 222 36.5
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.8e-21 107.5 131 44.3
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 1.8e-21 107.5 235 34.9
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 2.3e-21 107.1 122 45.9
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 3.1e-21 106.7 146 41.1
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 3.1e-21 106.7 212 35.4
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 4.0e-21 106.3 128 43.8
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 4.0e-21 106.3 128 43.8
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 4.0e-21 106.3 128 43.8
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 4.0e-21 106.3 120 46.7
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 4.0e-21 106.3 233 33.0
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 4.0e-21 106.3 124 43.5
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 5.2e-21 105.9 188 36.7
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 5.2e-21 105.9 125 41.6
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 8.9e-21 105.1 189 37.0
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.9e-21 105.1 124 43.5
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 8.9e-21 105.1 231 32.9
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 2.6e-20 103.6 127 43.3
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.6e-20 103.6 119 45.4
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.6e-20 103.6 127 43.3
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 2.6e-20 103.6 121 43.0
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 2.6e-20 103.6 185 34.6
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 3.4e-20 103.2 129 39.5
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 4.4e-20 102.8 190 39.5
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 5.8e-20 102.4 225 34.2
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 5.8e-20 102.4 119 45.4
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 1.3e-19 101.3 223 32.7
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 1.7e-19 100.9 125 43.2
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 1.7e-19 100.9 298 30.9
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 1.7e-19 100.9 154 39.0
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.7e-19 100.9 226 32.3
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 2.2e-19 100.5 125 43.2
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 2.9e-19 100.1 220 32.3
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 2.9e-19 100.1 231 33.3
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 2.9e-19 100.1 240 31.7
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 2.9e-19 100.1 125 44.0
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 2.9e-19 100.1 121 41.3
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 1.4e-18 97.8 208 32.2
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 1.9e-18 97.4 247 32.8
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 2.4e-18 97.1 231 33.3
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 3.2e-18 96.7 192 34.9
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 9.2e-18 95.1 232 31.5
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 4.6e-17 92.8 227 35.7
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.3e-16 91.3 127 39.4
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 1.5e-15 87.8 215 32.6
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 7.3e-15 85.5 209 30.6
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 8.1e-14 82.0 105 41.9
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 5.2e-13 79.3 116 38.8
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 5.2e-13 79.3 119 37.8
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 5.2e-13 79.3 99 42.4
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 5.2e-13 79.3 185 32.4
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 8.9e-13 78.6 174 31.6
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 6.4e-11 72.4 191 31.4
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.1e-09 67.4 100 36.0
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 7.3e-07 58.9 172 29.7


User provided reference genes

Program Settings