Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14609 Sequoiadendron giganteum HOM05D006868 ORTHO05D008444 3.4e-50 201.4 106 100.0
PGSC0003DMG400016644 Solanum tuberosum HOM05D006868 ORTHO05D008444 3.6e-44 181.4 104 88.5
Peaxi162Scf00739g00427 Petunia axillaris HOM05D006868 ORTHO05D008444 6.1e-44 180.6 104 89.4
Solyc06g048920.4 Solanum lycopersicum HOM05D006868 ORTHO05D008444 6.1e-44 180.6 104 88.5
Sopen06g015240 Solanum pennellii HOM05D006868 ORTHO05D008444 6.1e-44 180.6 104 88.5
Eucgr.G03143 Eucalyptus grandis HOM05D006868 ORTHO05D008444 1.0e-43 179.9 104 87.5
Nn2g10288 Nelumbo nucifera HOM05D006868 ORTHO05D008444 1.0e-43 179.9 104 87.5
Nitab4.5_0000171g0160 Nicotiana tabacum HOM05D006868 ORTHO05D008444 1.0e-43 179.9 100 93.0
CANSAT56G1982 Cannabis sativa HOM05D006868 ORTHO05D008444 1.4e-43 179.5 104 86.5
PGR142G3010 Punica granatum HOM05D006868 ORTHO05D008444 1.4e-43 179.5 104 88.5
TAR633G0975 Trochodendron aralioides HOM05D006868 ORTHO05D008444 1.4e-43 179.5 104 87.5
Dinv21851 Davidia involucrata HOM05D006868 ORTHO05D008444 1.8e-43 179.1 104 87.5
Migut.F00577 Erythranthe guttata HOM05D006868 ORTHO05D008444 1.8e-43 179.1 104 88.5
Potri.013G090900 Populus trichocarpa HOM05D006868 ORTHO05D008444 1.8e-43 179.1 104 87.5
DCAR_018040 Daucus carota HOM05D006868 ORTHO05D008444 2.3e-43 178.7 104 86.5
FAN10G3251 Fragaria x ananassa HOM05D006868 ORTHO05D008444 2.3e-43 178.7 104 87.5
CDE12G0946 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 3.0e-43 178.3 104 87.5
RcHm_v2.0_Chr1g0372371 Rosa chinensis HOM05D006868 ORTHO05D008444 3.0e-43 178.3 104 87.5
SGA_v2.0_scaffold60G20887 Striga asiatica HOM05D006868 ORTHO05D008444 4.0e-43 177.9 101 91.1
COL.COLO4_10032 Corchorus olitorius HOM05D006868 ORTHO05D008444 5.2e-43 177.6 103 89.3
FvH4_7g25990 Fragaria vesca HOM05D006868 ORTHO05D008444 5.2e-43 177.6 104 86.5
FAN06G3111 Fragaria x ananassa HOM05D006868 ORTHO05D008444 5.2e-43 177.6 104 86.5
Phvul.008G185600 Phaseolus vulgaris HOM05D006868 ORTHO05D008444 5.2e-43 177.6 104 86.5
GSVIVG01032665001 Vitis vinifera HOM05D000001 ORTHO05D008444 5.2e-43 177.6 104 86.5
Aa31LG3G1440 Aethionema arabicum HOM05D006868 ORTHO05D008444 6.8e-43 177.2 104 87.5
arahy.Tifrunner.gnm1.ann1.0CE3F9 Arachis hypogaea HOM05D006868 ORTHO05D008444 6.8e-43 177.2 104 86.5
Medtr5g067640 Medicago truncatula HOM05D006868 ORTHO05D008444 6.8e-43 177.2 104 86.5
Psat2g063200 Pisum sativum HOM05D006868 ORTHO05D008444 6.8e-43 177.2 104 86.5
Sabra13G0070500 Salix brachista HOM05D006868 ORTHO05D008444 6.8e-43 177.2 105 85.7
CDE04G1289 Ceratophyllum demersum HOM05D006868 ORTHO05D008444 8.8e-43 176.8 104 86.5
Ciclev10031473m.g Citrus clementina HOM05D006868 ORTHO05D008444 8.8e-43 176.8 104 86.5
ECA232G1245 Erigeron canadensis HOM05D006868 ORTHO05D008444 8.8e-43 176.8 104 85.6
Sabra13G0073600 Salix brachista HOM05D006868 ORTHO05D008444 8.8e-43 176.8 104 86.5
LjContig00408g0011230 Lotus japonicus HOM05D006868 ORTHO05D008444 1.2e-42 176.4 104 86.5
SalBow3G4174 Salvia bowleyana HOM05D006868 ORTHO05D008444 1.2e-42 176.4 104 88.5
TPR.G27028 Trifolium pratense HOM05D006868 ORTHO05D008444 1.2e-42 176.4 101 89.1
Oeu054415.1 Olea europaea HOM05D006868 ORTHO05D008444 1.5e-42 176.0 101 90.1
QL08p064908 Quercus lobata HOM05D006868 ORTHO05D008444 1.5e-42 176.0 104 85.6
Actinidia13645 Actinidia chinensis HOM05D006868 ORTHO05D008444 2.0e-42 175.6 104 85.6
Haze_17362 Corylus avellana HOM05D006868 ORTHO05D008444 2.0e-42 175.6 104 85.6
VMungo0647G1252 Vigna mungo HOM05D006868 ORTHO05D008444 2.0e-42 175.6 104 85.6
Thhalv10016719m.g Eutrema salsugineum HOM05D006868 ORTHO05D008444 2.6e-42 175.3 104 86.5
FAN03G1483 Fragaria x ananassa HOM05D006868 ORTHO05D008444 2.6e-42 175.3 104 86.5
Sp4g23010 Schrenkiella parvula HOM05D006868 ORTHO05D008444 2.6e-42 175.3 104 86.5
Ca_05512_v3 Cicer arietinum L. HOM05D006868 ORTHO05D008444 3.4e-42 174.9 104 85.6
HanXRQChr15g0493721 Helianthus annuus HOM05D006868 ORTHO05D008444 3.4e-42 174.9 104 84.6
Prupe.2G264600 Prunus persica HOM05D006868 ORTHO05D008444 3.4e-42 174.9 104 85.6
Thecc.10G177500 Theobroma cacao HOM05D006868 ORTHO05D008444 3.4e-42 174.9 104 85.6
ATR1127G100 Amborella trichopoda HOM05D006868 ORTHO05D008444 4.4e-42 174.5 100 91.0
AL4G38560 Arabidopsis lyrata HOM05D006868 ORTHO05D008444 4.4e-42 174.5 104 85.6
AT2G40690 Arabidopsis thaliana HOM05D006868 ORTHO05D008444 4.4e-42 174.5 104 85.6
Lalb_Chr17g0344691 Lupinus albus HOM05D006868 ORTHO05D008444 4.4e-42 174.5 101 89.1
MELO3C020157.2 Cucumis melo HOM05D006868 ORTHO05D008444 5.7e-42 174.1 104 85.6
CsaV3_5G011040 Cucumis sativus L. HOM05D006868 ORTHO05D008444 5.7e-42 174.1 104 85.6
Hund13444 Selenicereus undatus HOM05D006868 ORTHO05D008444 5.7e-42 174.1 104 85.6
FAN01G2299 Fragaria x ananassa HOM05D006868 ORTHO05D008444 7.5e-42 173.7 104 85.6
BcaB06g29168 Brassica carinata HOM05D006868 ORTHO05D008444 9.8e-42 173.3 104 85.6
vmacro06897 Vaccinium macrocarpon HOM05D006868 ORTHO05D008444 9.8e-42 173.3 101 87.1
Carub.0004s2298 Capsella rubella HOM05D006868 ORTHO05D008444 1.3e-41 172.9 104 84.6
Duzib114G0133 Durio zibethinus HOM05D006868 ORTHO05D008444 1.3e-41 172.9 104 83.7
Lsat_1_v5_gn_9_60160 Lactuca sativa HOM05D006868 ORTHO05D008444 1.3e-41 172.9 100 88.0
Sed0006945 Sechium edule HOM05D006868 ORTHO05D008444 1.3e-41 172.9 104 84.6
THA.LOC104813883 Tarenaya hassleriana HOM05D006868 ORTHO05D008444 1.3e-41 172.9 104 84.6
CAN.G24.1 Capsicum annuum HOM05D006868 ORTHO05D008444 1.7e-41 172.6 100 89.0
ClCG07G005190 Citrullus lanatus HOM05D006868 ORTHO05D008444 2.2e-41 172.2 101 87.1
Lj1A968G51 Lonicera japonica HOM05D006868 ORTHO05D008444 2.2e-41 172.2 100 88.0
MD07G1234300 Malus domestica HOM05D006868 ORTHO05D008444 2.2e-41 172.2 104 84.6
BcaC02g07329 Brassica carinata HOM05D006868 ORTHO05D008444 2.8e-41 171.8 104 84.6
AUR62024939 Chenopodium quinoa HOM05D006868 ORTHO05D008444 2.8e-41 171.8 101 87.1
Ah.10g029580 Amaranthus hybridus HOM05D006868 ORTHO05D008444 3.7e-41 171.4 104 84.6
AUR62030605 Chenopodium quinoa HOM05D006868 ORTHO05D008444 3.7e-41 171.4 100 88.0
Cpa.g.sc19.51 Carica papaya HOM05D006868 ORTHO05D008444 4.9e-41 171.0 104 84.6
Aqoxy1G01258 Aquilegia oxysepala HOM05D006868 ORTHO05D008444 6.3e-41 170.6 104 82.7
Sc10g0003020 Simmondsia chinensis HOM05D006868 ORTHO05D008444 6.3e-41 170.6 104 84.6
A04p31090 Brassica napus HOM05D006868 ORTHO05D008444 8.3e-41 170.2 101 87.1
C04p68480 Brassica napus HOM05D006868 ORTHO05D008444 8.3e-41 170.2 101 87.1
BolC4t28348H Brassica oleracea HOM05D006868 ORTHO05D008444 8.3e-41 170.2 101 87.1
BraA04t18564Z Brassica rapa HOM05D006868 ORTHO05D008444 8.3e-41 170.2 101 87.1
CSS0030170 Camellia sinensis var. sinensis HOM05D006868 ORTHO05D008444 1.4e-40 169.5 104 82.7
Cc02_g05320 Coffea canephora HOM05D006868 ORTHO05D008444 1.8e-40 169.1 104 83.7
PSO017G2385 Papaver somniferum HOM05D006868 ORTHO05D008444 2.4e-40 168.7 104 81.7
Mapoly0076s0092 Marchantia polymorpha HOM05D006868 ORTHO05D008444 3.1e-40 168.3 104 82.7
PSO170G6852 Papaver somniferum HOM05D006868 ORTHO05D008444 3.1e-40 168.3 104 81.7
Gohir.A05G402600 Gossypium hirsutum HOM05D006868 ORTHO05D008444 9.2e-40 166.8 104 80.8
Gohir.D04G012900 Gossypium hirsutum HOM05D006868 ORTHO05D008444 9.2e-40 166.8 104 80.8
Gorai.012G015200 Gossypium raimondii HOM05D006868 ORTHO05D008444 9.2e-40 166.8 104 80.8
AagrBONN_evm.TU.Sc2ySwM_117.1137 Anthoceros agrestis HOM05D006868 ORTHO05D008444 5.9e-39 164.1 100 85.0
Pp3c1_10090 Physcomitrium patens HOM05D006868 ORTHO05D008444 6.6e-38 160.6 104 78.8
Pp3c2_32750 Physcomitrium patens HOM05D006868 ORTHO05D008444 4.3e-37 157.9 104 76.9
MCO03G330 Micromonas commoda HOM05D006868 ORTHO05D008444 5.2e-35 151.0 104 74.0
Atru.chr12.218 Acer truncatum HOM05D006868 ORTHO05D008444 2.9e-33 145.2 104 76.0
Cre12.g511150 Chlamydomonas reinhardtii HOM05D006868 ORTHO05D008444 2.4e-32 142.1 101 68.3
PRCOL_00000183 Prasinoderma coloniale HOM05D006868 ORTHO05D008444 1.0e-30 136.7 101 68.3
COL.COLO4_28987 Corchorus olitorius HOM05D006868 ORTHO05D008444 1.1e-16 90.1 62 71.0
COL.COLO4_20551 Corchorus olitorius HOM05D006868 ORTHO05D008444 1.4e-16 89.7 49 89.8
Zm00001eb303710 Zea mays HOM05D006868 ORTHO05D008444 1.2e-15 86.7 50 84.0
arahy.Tifrunner.gnm1.ann1.TI95SE Arachis hypogaea HOM05D006868 ORTHO05D008444 1.6e-15 86.3 61 70.5
Cre09.g387763 Chlamydomonas reinhardtii HOM05D006868 ORTHO05D008444 1.0e-14 83.6 97 47.4
arahy.Tifrunner.gnm1.ann1.V5X90G Arachis hypogaea HOM05D006868 ORTHO05D008444 3.9e-14 81.6 56 73.2
Rhsim03G0153100 Rhododendron simsii HOM05D006868 ORTHO05D008444 3.9e-14 81.6 51 82.4
Haze_26798 Corylus avellana HOM05D005501 ORTHO05D008444 7.6e-10 67.4 99 40.4
Ca_29312_v3 Cicer arietinum L. HOM05D006868 ORTHO05D008444 7.1e-08 60.8 74 41.9
TPR.G29306 Trifolium pratense HOM05D006868 ORTHO05D008444 1.3e-06 56.6 32 81.2
Hma1.2p1_0111F.1_g053450 Hydrangea macrophylla HOM05D006868 ORTHO05D008444 6.6e-06 54.3 35 74.3


User provided reference genes

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