Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14565 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 2.6e-103 378.6 183 100.0
SEGI_33500 Sequoiadendron giganteum HOM05D004964 ORTHO05D005918 6.6e-78 294.3 143 99.3
PSO210G0659 Papaver somniferum HOM05D004964 ORTHO05D005918 2.3e-22 109.8 167 38.9
PSO210G1919 Papaver somniferum HOM05D004964 ORTHO05D005918 3.0e-22 109.4 167 38.9
Dinv18988 Davidia involucrata HOM05D004964 ORTHO05D005918 5.1e-22 108.6 162 39.5
Aqoxy4G00649 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 1.5e-21 107.1 164 40.2
Nn4g26424 Nelumbo nucifera HOM05D004964 ORTHO05D005918 1.5e-21 107.1 163 38.7
Cc02_g08800 Coffea canephora HOM05D004964 ORTHO05D005918 1.9e-21 106.7 169 37.9
Aqoxy5G02134 Aquilegia oxysepala HOM05D004964 ORTHO05D005918 3.3e-21 105.9 164 39.0
Rhsim09G0136900 Rhododendron simsii HOM05D004964 ORTHO05D005918 4.3e-21 105.5 171 36.8
vmacro10367 Vaccinium macrocarpon HOM05D004964 ORTHO05D005918 9.6e-21 104.4 171 39.2
COL.COLO4_00075 Corchorus olitorius HOM05D004964 ORTHO05D005918 1.3e-20 104.0 168 37.5
Mapoly0082s0051 Marchantia polymorpha HOM05D004964 ORTHO05D005918 3.7e-20 102.4 208 33.7
MBI07_g16903_MAGBIO Magnolia biondii HOM05D004964 ORTHO05D005918 6.2e-20 101.7 167 34.7
HanXRQChr07g0204481 Helianthus annuus HOM05D004964 ORTHO05D005918 8.2e-20 101.3 162 36.4
Lj2A43G39 Lonicera japonica HOM05D004964 ORTHO05D005918 1.1e-19 100.9 162 38.3
Ah.10g037790 Amaranthus hybridus HOM05D004964 ORTHO05D005918 1.4e-19 100.5 165 36.4
CSS0014360 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 2.4e-19 99.8 166 36.7
Lsat_1_v5_gn_8_24860 Lactuca sativa HOM05D004964 ORTHO05D005918 2.4e-19 99.8 162 36.4
Manes.08G139500 Manihot esculenta HOM05D004964 ORTHO05D005918 2.4e-19 99.8 167 37.1
Atru.chr2.987 Acer truncatum HOM05D004964 ORTHO05D005918 4.0e-19 99.0 169 34.9
TPR.G33137 Trifolium pratense HOM05D004964 ORTHO05D005918 5.3e-19 98.6 171 35.1
arahy.Tifrunner.gnm1.ann1.J3Q9FM Arachis hypogaea HOM05D004964 ORTHO05D005918 6.9e-19 98.2 166 36.7
CDE04G2937 Ceratophyllum demersum HOM05D004964 ORTHO05D005918 6.9e-19 98.2 165 36.4
AUR62023306 Chenopodium quinoa HOM05D004964 ORTHO05D005918 9.0e-19 97.8 164 34.8
TAR362G0358 Trochodendron aralioides HOM05D004964 ORTHO05D005918 9.0e-19 97.8 169 37.3
MD04G1230400 Malus domestica HOM05D004964 ORTHO05D005918 1.2e-18 97.4 168 37.5
Phvul.010G051000 Phaseolus vulgaris HOM05D004964 ORTHO05D005918 1.5e-18 97.1 162 34.6
Hund13719 Selenicereus undatus HOM05D004964 ORTHO05D005918 1.5e-18 97.1 162 33.3
Thecc.05G270700 Theobroma cacao HOM05D004964 ORTHO05D005918 1.5e-18 97.1 166 36.1
Ciclev10020293m.g Citrus clementina HOM05D004964 ORTHO05D005918 2.0e-18 96.7 164 36.6
HPP92_003061 Vanilla planifolia HOM05D004964 ORTHO05D005918 2.0e-18 96.7 163 37.4
Psat4g225120 Pisum sativum HOM05D004964 ORTHO05D005918 2.6e-18 96.3 177 35.0
Oeu016533.1 Olea europaea HOM05D004964 ORTHO05D005918 3.4e-18 95.9 162 37.0
VMungo0331G1958 Vigna mungo HOM05D004964 ORTHO05D005918 3.4e-18 95.9 162 34.6
arahy.Tifrunner.gnm1.ann1.H9CC2T Arachis hypogaea HOM05D004964 ORTHO05D005918 4.5e-18 95.5 166 36.1
Solyc01g111410.3 Solanum lycopersicum HOM05D004964 ORTHO05D005918 4.5e-18 95.5 164 36.6
PGSC0003DMG401006195 Solanum tuberosum HOM05D004964 ORTHO05D005918 4.5e-18 95.5 164 36.0
GSVIVG01023502001 Vitis vinifera HOM05D004964 ORTHO05D005918 4.5e-18 95.5 166 34.9
Lalb_Chr03g0040321 Lupinus albus HOM05D004964 ORTHO05D005918 7.6e-18 94.7 168 35.1
Sopen01g053470 Solanum pennellii HOM05D004964 ORTHO05D005918 7.6e-18 94.7 164 34.8
MSTRG.14348 Avicennia marina HOM05D004964 ORTHO05D005918 1.0e-17 94.4 165 36.4
Duzib106G0302 Durio zibethinus HOM05D004964 ORTHO05D005918 1.0e-17 94.4 162 37.0
TPR.G17496 Trifolium pratense HOM05D004964 ORTHO05D005918 1.3e-17 94.0 166 33.7
Nitab4.5_0013387g0040 Nicotiana tabacum HOM05D004964 ORTHO05D005918 1.7e-17 93.6 173 35.3
Pp3c11_21460 Physcomitrium patens HOM05D004964 ORTHO05D005918 2.2e-17 93.2 223 30.0
Potri.013G047100 Populus trichocarpa HOM05D004964 ORTHO05D005918 2.2e-17 93.2 167 33.5
SGA_v2.0_scaffold295G47511 Striga asiatica HOM05D004964 ORTHO05D005918 2.2e-17 93.2 162 37.7
Lj3g0015193 Lotus japonicus HOM05D004964 ORTHO05D005918 2.9e-17 92.8 169 33.1
MD12G1248600 Malus domestica HOM05D004964 ORTHO05D005918 3.8e-17 92.4 170 33.5
Medtr8g006785 Medicago truncatula HOM05D004964 ORTHO05D005918 3.8e-17 92.4 171 31.6
CAN.G588.60 Capsicum annuum HOM05D004964 ORTHO05D005918 4.9e-17 92.0 164 36.0
AagrBONN_evm.TU.Sc2ySwM_340.245 Anthoceros agrestis HOM05D004964 ORTHO05D005918 6.5e-17 91.7 165 35.8
AUR62008995 Chenopodium quinoa HOM05D004964 ORTHO05D005918 8.4e-17 91.3 163 33.7
Ca_14064_v3 Cicer arietinum L. HOM05D004964 ORTHO05D005918 8.4e-17 91.3 172 33.7
Gohir.A08G217400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 8.4e-17 91.3 162 35.8
Glyma.07G113400 Glycine max HOM05D004964 ORTHO05D005918 1.1e-16 90.9 166 33.1
Pp3c7_7610 Physcomitrium patens HOM05D004964 ORTHO05D005918 1.1e-16 90.9 232 29.7
A06p47210 Brassica napus HOM05D004964 ORTHO05D005918 1.4e-16 90.5 162 35.8
Migut.F00800 Erythranthe guttata HOM05D004964 ORTHO05D005918 1.4e-16 90.5 162 35.2
EL10Ac2g04577 Beta vulgaris HOM05D004964 ORTHO05D005918 1.9e-16 90.1 167 33.5
BcaC06g34559 Brassica carinata HOM05D004964 ORTHO05D005918 2.5e-16 89.7 162 36.4
C07p27180 Brassica napus HOM05D004964 ORTHO05D005918 2.5e-16 89.7 162 36.4
BolC7t43245H Brassica oleracea HOM05D004964 ORTHO05D005918 2.5e-16 89.7 162 36.4
CsaV3_2G009770 Cucumis sativus L. HOM05D004964 ORTHO05D005918 2.5e-16 89.7 175 31.4
BraA06t27592Z Brassica rapa HOM05D004964 ORTHO05D005918 4.2e-16 89.0 162 35.2
Glyma.03G113500 Glycine max HOM05D004964 ORTHO05D005918 5.5e-16 88.6 164 32.9
CSS0038343 Camellia sinensis var. sinensis HOM05D004964 ORTHO05D005918 7.1e-16 88.2 164 36.0
MELO3C008708.2 Cucumis melo HOM05D004964 ORTHO05D005918 7.1e-16 88.2 175 30.9
Sed0000191 Sechium edule HOM05D004964 ORTHO05D005918 7.1e-16 88.2 177 31.1
Gorai.004G249200 Gossypium raimondii HOM05D004964 ORTHO05D005918 9.3e-16 87.8 162 35.8
ATR0736G161 Amborella trichopoda HOM05D004964 ORTHO05D005918 1.2e-15 87.4 153 34.0
Gohir.D08G234400 Gossypium hirsutum HOM05D004964 ORTHO05D005918 1.2e-15 87.4 162 35.8
SGA_v2.0_scaffold26G11247 Striga asiatica HOM05D004964 ORTHO05D005918 6.0e-15 85.1 164 33.5
Cfa006356 Carpinus fangiana HOM05D004964 ORTHO05D005918 1.3e-14 84.0 162 32.1
Sc10g0001190 Simmondsia chinensis HOM05D004964 ORTHO05D005918 2.3e-14 83.2 167 33.5
RcHm_v2.0_Chr3g0449661 Rosa chinensis HOM05D004964 ORTHO05D005918 3.9e-14 82.4 162 32.7
SHI23132 Sapria himalayana HOM05D000024 ORTHO05D000007 5.1e-14 82.0 148 35.1
unitig_46.g18500 Utricularia gibba HOM05D004964 ORTHO05D005918 6.7e-14 81.6 164 32.3
unitig_47.g30763 Utricularia gibba HOM05D004964 ORTHO05D005918 6.7e-14 81.6 164 32.3
FAN02G1272 Fragaria x ananassa HOM05D004964 ORTHO05D005918 8.7e-14 81.3 162 33.3
Eucgr.H04227 Eucalyptus grandis HOM05D004964 ORTHO05D005918 1.1e-13 80.9 167 34.7
FAN14G2205 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.1e-13 80.9 162 32.7
FvH4_6g01921 Fragaria vesca HOM05D004964 ORTHO05D005918 1.5e-13 80.5 162 32.7
FAN05G4826 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-13 80.5 162 33.3
FAN09G0282 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-13 80.5 162 32.7
FAN14G5822 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.5e-13 80.5 162 32.7
QL03p029974 Quercus lobata HOM05D004964 ORTHO05D005918 1.5e-13 80.5 162 33.3
FAN05G4025 Fragaria x ananassa HOM05D004964 ORTHO05D005918 1.9e-13 80.1 162 32.7
Hma1.2p1_1512F.1_g287895 Hydrangea macrophylla HOM05D004964 ORTHO05D005918 3.3e-13 79.3 147 33.3
QL03p029942 Quercus lobata HOM05D004964 ORTHO05D005918 3.3e-13 79.3 162 31.5
QL03p030368 Quercus lobata HOM05D004964 ORTHO05D005918 3.3e-13 79.3 162 34.0
Prupe.6G350300 Prunus persica HOM05D004964 ORTHO05D005918 5.7e-13 78.6 148 35.1
SMO146G0189 Selaginella moellendorffii HOM05D004964 ORTHO05D005918 5.7e-13 78.6 170 34.7
Carub.0001s0952 Capsella rubella HOM05D004964 ORTHO05D005918 7.4e-13 78.2 166 31.9
BcaB07g30949 Brassica carinata HOM05D004964 ORTHO05D005918 9.7e-13 77.8 164 31.7
Thhalv10000880m.g Eutrema salsugineum HOM05D004964 ORTHO05D005918 1.6e-12 77.0 162 32.1
Cpa.g.sc162.40 Carica papaya HOM05D004964 ORTHO05D005918 2.2e-12 76.6 150 34.0
CiPaw.07G072600 Carya illinoinensis HOM05D004964 ORTHO05D005918 3.7e-12 75.9 164 31.1
BcaC06g31621 Brassica carinata HOM05D004964 ORTHO05D005918 6.3e-12 75.1 162 30.9
SGA_v2.0_scaffold177G39428 Striga asiatica HOM05D004964 ORTHO05D005918 8.2e-12 74.7 179 31.3
AL1G47560 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 1.1e-11 74.3 162 32.7
DCAR_022832 Daucus carota HOM05D004964 ORTHO05D005918 1.1e-11 74.3 162 32.7
BraA09t37709Z Brassica rapa HOM05D004964 ORTHO05D005918 1.4e-11 73.9 162 30.2
AT1G10095 Arabidopsis thaliana HOM05D004964 ORTHO05D005918 2.4e-11 73.2 163 32.5
AL1G20790 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 3.1e-11 72.8 162 30.9
CARHR010210 Cardamine hirsuta HOM05D004964 ORTHO05D005918 3.1e-11 72.8 164 30.5
AL1G20660 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 6.9e-11 71.6 162 30.9
Peaxi162Scf00407g00626 Petunia axillaris HOM05D004964 ORTHO05D005918 9.0e-11 71.2 147 30.6
A09p21080 Brassica napus HOM05D004964 ORTHO05D005918 1.2e-10 70.9 162 29.6
AL1G47570 Arabidopsis lyrata HOM05D004964 ORTHO05D005918 2.6e-10 69.7 167 31.7
Zm00001eb229480 Zea mays HOM05D004964 ORTHO05D005918 3.4e-10 69.3 162 30.9
Lsat_1_v5_gn_6_73440 Lactuca sativa HOM05D001771 ORTHO05D001876 4.5e-10 68.9 143 30.8
CANSAT01G0497 Cannabis sativa HOM05D004964 ORTHO05D005918 1.3e-09 67.4 96 39.6
Haze_04422 Corylus avellana HOM05D004964 ORTHO05D005918 2.2e-09 66.6 121 36.4
QL03p030425 Quercus lobata HOM05D004964 ORTHO05D005918 2.2e-09 66.6 147 31.3
Nitab4.5_0005396g0030 Nicotiana tabacum HOM05D004964 ORTHO05D005918 2.9e-09 66.2 98 35.7
ECA233G3630 Erigeron canadensis HOM05D004964 ORTHO05D005918 3.8e-09 65.9 96 35.4
QL03p030280 Quercus lobata HOM05D004964 ORTHO05D005918 4.6e-07 58.9 162 29.0
Sabra13G0043100 Salix brachista HOM05D004964 ORTHO05D005918 2.3e-06 56.6 92 37.0
Hund12147 Selenicereus undatus HOM05D004964 ORTHO05D005918 3.0e-06 56.2 96 32.3
SGA_v2.0_scaffold26G11248 Striga asiatica HOM05D004964 ORTHO05D005918 3.0e-06 56.2 96 32.3


User provided reference genes

Program Settings