Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14551 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.7e-81 305.8 146 100.0
SEGI_24806 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.5e-80 302.8 146 99.3
SEGI_00481 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 4.8e-15 85.1 58 72.4
Mapoly0001s0501 Marchantia polymorpha HOM05D004226 ORTHO05D004842 1.9e-11 73.2 49 67.3
SEGI_39221 Sequoiadendron giganteum HOM05D004226 ORTHO05D004842 1.9e-11 73.2 62 58.1
TAR362G0792 Trochodendron aralioides HOM05D004226 ORTHO05D004842 9.4e-11 70.9 76 50.0
Actinidia30018 Actinidia chinensis HOM05D004226 ORTHO05D004842 1.6e-10 70.1 61 60.7
EL10Ac5g10626 Beta vulgaris HOM05D004226 ORTHO05D004842 2.7e-10 69.3 59 55.9
SMO146G0354 Selaginella moellendorffii HOM05D004226 ORTHO05D004842 1.0e-09 67.4 49 61.2
Actinidia23795 Actinidia chinensis HOM05D004226 ORTHO05D004842 2.3e-09 66.2 59 55.9
TAR633G1997 Trochodendron aralioides HOM05D004226 ORTHO05D004842 3.0e-09 65.9 76 46.1
Dinv10439 Davidia involucrata HOM05D004226 ORTHO05D004842 4.0e-09 65.5 61 55.7
TAR365G1191 Trochodendron aralioides HOM05D004226 ORTHO05D004842 4.0e-09 65.5 61 55.7
Ah.11g051030 Amaranthus hybridus HOM05D004226 ORTHO05D004842 5.2e-09 65.1 59 50.8
Rhsim13G0052600 Rhododendron simsii HOM05D004226 ORTHO05D004842 5.2e-09 65.1 59 55.9
Hund02794 Selenicereus undatus HOM05D004226 ORTHO05D004842 5.2e-09 65.1 60 50.0
Hund09468 Selenicereus undatus HOM05D004226 ORTHO05D004842 5.2e-09 65.1 59 54.2
Dinv28812 Davidia involucrata HOM05D004226 ORTHO05D004842 6.7e-09 64.7 61 57.4
Actinidia34543 Actinidia chinensis HOM05D004226 ORTHO05D004842 8.8e-09 64.3 59 54.2
MSTRG.18494 Avicennia marina HOM05D004226 ORTHO05D004842 8.8e-09 64.3 68 48.5
CiPaw.13G055300 Carya illinoinensis HOM05D004226 ORTHO05D004842 8.8e-09 64.3 59 52.5
CANSAT01G0104 Cannabis sativa HOM05D004226 ORTHO05D004842 2.0e-08 63.2 57 54.4
Migut.N00664 Erythranthe guttata HOM05D004226 ORTHO05D004842 2.0e-08 63.2 59 54.2
Nitab4.5_0000038g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.0e-08 63.2 53 60.4
Nitab4.5_0009151g0020 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.0e-08 63.2 53 60.4
Cc01_g16140 Coffea canephora HOM05D004226 ORTHO05D004842 2.6e-08 62.8 59 52.5
PGR083G1064 Punica granatum HOM05D004226 ORTHO05D004842 2.6e-08 62.8 52 59.6
SGA_v2.0_scaffold624G53238 Striga asiatica HOM05D004226 ORTHO05D004842 2.6e-08 62.8 59 54.2
QL09p046251 Quercus lobata HOM05D004226 ORTHO05D004842 3.3e-08 62.4 52 61.5
Rhsim01G0248500 Rhododendron simsii HOM05D004226 ORTHO05D004842 3.3e-08 62.4 66 50.0
SGA_v2.0_scaffold29G12070 Striga asiatica HOM05D004226 ORTHO05D004842 3.3e-08 62.4 58 53.4
Ciclev10016998m.g Citrus clementina HOM05D004226 ORTHO05D004842 5.7e-08 61.6 53 58.5
Haze_03501 Corylus avellana HOM05D004226 ORTHO05D004842 5.7e-08 61.6 53 54.7
Nn1g08255 Nelumbo nucifera HOM05D004226 ORTHO05D004842 5.7e-08 61.6 61 50.8
PGSC0003DMG400027348 Solanum tuberosum HOM05D004226 ORTHO05D004842 5.7e-08 61.6 58 55.2
SGA_v2.0_scaffold8G04494 Striga asiatica HOM05D004226 ORTHO05D004842 5.7e-08 61.6 61 55.7
Aqoxy2G03959 Aquilegia oxysepala HOM05D004226 ORTHO05D004842 7.5e-08 61.2 59 52.5
Eucgr.H00726 Eucalyptus grandis HOM05D004226 ORTHO05D004842 7.5e-08 61.2 53 54.7
AUR62008122 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.7e-08 60.8 61 50.8
AUR62028700 Chenopodium quinoa HOM05D004226 ORTHO05D004842 9.7e-08 60.8 61 50.8
ClCG05G015470 Citrullus lanatus HOM05D004226 ORTHO05D004842 9.7e-08 60.8 68 48.5
COL.COLO4_26572 Corchorus olitorius HOM05D004226 ORTHO05D004842 9.7e-08 60.8 53 54.7
Lalb_Chr03g0041091 Lupinus albus HOM05D004226 ORTHO05D004842 9.7e-08 60.8 60 55.0
MSTRG.21303 Avicennia marina HOM05D004226 ORTHO05D004842 1.3e-07 60.5 59 50.8
Cfa010569 Carpinus fangiana HOM05D004226 ORTHO05D004842 1.3e-07 60.5 53 52.8
CDE05G0628 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 1.3e-07 60.5 49 57.1
vmacro14692 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 1.3e-07 60.5 53 56.6
Migut.D00735 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.7e-07 60.1 49 57.1
ATR0686G035 Amborella trichopoda HOM05D004226 ORTHO05D004842 2.2e-07 59.7 60 45.0
CDE05G1161 Ceratophyllum demersum HOM05D004226 ORTHO05D004842 2.2e-07 59.7 61 50.8
Phvul.008G136900 Phaseolus vulgaris HOM05D004226 ORTHO05D004842 2.2e-07 59.7 52 55.8
VMungo1383G2422 Vigna mungo HOM05D004226 ORTHO05D004842 2.2e-07 59.7 52 55.8
Duzib133G0243 Durio zibethinus HOM05D004226 ORTHO05D004842 2.8e-07 59.3 63 52.4
Lj2A1117T18 Lonicera japonica HOM05D004226 ORTHO05D004842 2.8e-07 59.3 61 52.5
Lalb_Chr01g0021991 Lupinus albus HOM05D004226 ORTHO05D004842 2.8e-07 59.3 53 54.7
CAN.G181.39 Capsicum annuum HOM05D004226 ORTHO05D004842 3.7e-07 58.9 49 59.2
DCAR_012646 Daucus carota HOM05D004226 ORTHO05D004842 3.7e-07 58.9 53 52.8
Thecc.01G211100 Theobroma cacao HOM05D004226 ORTHO05D004842 3.7e-07 58.9 53 54.7
Oeu003656.1 Olea europaea HOM05D004226 ORTHO05D004842 4.8e-07 58.5 52 51.9
Psat3g151000 Pisum sativum HOM05D004226 ORTHO05D004842 4.8e-07 58.5 65 49.2
vmacro02815 Vaccinium macrocarpon HOM05D004226 ORTHO05D004842 4.8e-07 58.5 59 49.2
MELO3C003732.2 Cucumis melo HOM05D004226 ORTHO05D004842 6.3e-07 58.2 56 51.8
Duzib138G1045 Durio zibethinus HOM05D004226 ORTHO05D004842 6.3e-07 58.2 59 49.2
Lj1g0015941 Lotus japonicus HOM05D004226 ORTHO05D004842 6.3e-07 58.2 52 55.8
Glyma.08G344200 Glycine max HOM05D004226 ORTHO05D004842 8.2e-07 57.8 52 57.7
Medtr7g052690 Medicago truncatula HOM05D004226 ORTHO05D004842 8.2e-07 57.8 66 48.5
PSO017G4362 Papaver somniferum HOM05D004226 ORTHO05D004842 8.2e-07 57.8 59 47.5
PSO675G4654 Papaver somniferum HOM05D004226 ORTHO05D004842 8.2e-07 57.8 59 47.5
Oeu057834.2 Olea europaea HOM05D000039 ORTHO05D005440 1.1e-06 57.4 59 47.5
Cpa.g.sc8.73 Carica papaya HOM05D004226 ORTHO05D004842 1.4e-06 57.0 52 53.8
ECA247G2547 Erigeron canadensis HOM05D004226 ORTHO05D004842 1.4e-06 57.0 59 47.5
Migut.D00732 Erythranthe guttata HOM05D004226 ORTHO05D004842 1.4e-06 57.0 49 57.1
Sed0006210 Sechium edule HOM05D004226 ORTHO05D004842 1.4e-06 57.0 59 50.8
CsaV3_3G046080 Cucumis sativus L. HOM05D004226 ORTHO05D004842 1.8e-06 56.6 56 50.0
Glyma.18G152900 Glycine max HOM05D004226 ORTHO05D004842 1.8e-06 56.6 64 48.4
Peaxi162Scf00372g00004 Petunia axillaris HOM05D004226 ORTHO05D004842 1.8e-06 56.6 53 52.8
Sc17g0001670 Simmondsia chinensis HOM05D004226 ORTHO05D004842 1.8e-06 56.6 61 49.2
PGSC0003DMG400020653 Solanum tuberosum HOM05D004226 ORTHO05D004842 1.8e-06 56.6 57 52.6
Nitab4.5_0002167g0150 Nicotiana tabacum HOM05D004226 ORTHO05D004842 2.4e-06 56.2 53 54.7
Sopen06g002500 Solanum pennellii HOM05D004226 ORTHO05D004842 3.1e-06 55.8 57 49.1
Hma1.2p1_0781F.1_g216920 Hydrangea macrophylla HOM05D004226 ORTHO05D004842 4.1e-06 55.5 62 48.4
Solyc06g007610.2 Solanum lycopersicum HOM05D004226 ORTHO05D004842 4.1e-06 55.5 79 40.5
Sopen11g003480 Solanum pennellii HOM05D004226 ORTHO05D004842 4.1e-06 55.5 58 50.0
THA.LOC104802646 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 4.1e-06 55.5 53 52.8
Ca_07469_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.0e-06 54.7 52 51.9
Ca_30573_v3 Cicer arietinum L. HOM05D004226 ORTHO05D004842 7.0e-06 54.7 52 51.9
Gohir.D11G148800 Gossypium hirsutum HOM05D004226 ORTHO05D004842 7.0e-06 54.7 53 49.1
Gorai.007G159600 Gossypium raimondii HOM05D004226 ORTHO05D004842 7.0e-06 54.7 53 49.1
Lsat_1_v5_gn_8_98041 Lactuca sativa HOM05D004226 ORTHO05D004842 7.0e-06 54.7 53 50.9
THA.LOC104818997 Tarenaya hassleriana HOM05D004226 ORTHO05D004842 7.0e-06 54.7 53 52.8
Gohir.A11G142500 Gossypium hirsutum HOM05D004226 ORTHO05D004842 9.1e-06 54.3 53 49.1
Nitab4.5_0002311g0050 Nicotiana tabacum HOM05D004226 ORTHO05D004842 9.1e-06 54.3 53 52.8


User provided reference genes

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