Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14546 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 3749.5 1908 100.0
SEGI_28539 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 2592.8 1932 71.7
SEGI_05804 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 2201.8 1960 61.0
SEGI_03751 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 2036.2 1892 60.2
SEGI_20413 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 1841.2 2102 52.0
SEGI_06130 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 1696.0 1477 61.9
SEGI_11018 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 1343.9 2003 42.4
SEGI_41445 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 0.0e+00 1099.3 1756 40.3
SEGI_23622 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-292 1011.1 1915 37.7
SEGI_39701 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 9.9e-286 988.0 1903 36.8
SEGI_28572 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.2e-276 956.1 2000 35.0
SEGI_29838 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.2e-268 928.7 1954 36.3
SEGI_28309 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.8e-248 863.6 2030 32.5
SEGI_00368 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-232 810.1 1276 40.7
SEGI_02565 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-232 810.1 1276 40.7
SEGI_16407 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-232 810.1 895 53.1
SEGI_16474 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-212 744.2 1257 41.4
SEGI_08952 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.2e-190 672.2 1574 34.4
SEGI_33726 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.5e-177 627.1 1555 32.1
SEGI_06464 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.3e-172 610.9 880 44.3
SEGI_30865 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.7e-165 586.6 473 67.9
SEGI_36560 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.5e-151 540.4 1119 34.0
SEGI_19179 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.2e-150 539.3 1483 30.0
SEGI_06175 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-148 531.6 1162 33.4
SEGI_13951 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.2e-145 522.7 1060 34.0
SEGI_41089 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.9e-143 515.4 1057 34.7
SEGI_28978 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.6e-142 512.3 688 45.9
SEGI_19044 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.5e-137 494.2 1082 33.8
SEGI_11845 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.9e-137 493.8 1166 31.6
SEGI_12606 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.1e-130 473.0 1435 28.9
SEGI_01163 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.7e-125 453.8 474 52.7
SEGI_28151 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.3e-123 449.5 781 37.3
SEGI_03611 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.0e-122 443.7 1099 31.3
SEGI_21161 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.0e-117 428.3 852 34.7
SEGI_36134 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.2e-111 407.9 839 33.8
SEGI_40392 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.7e-110 404.4 504 45.6
SEGI_04805 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.8e-109 400.6 673 43.5
SEGI_27684 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 6.8e-109 400.6 673 43.5
SEGI_01049 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.0e-108 399.1 1409 27.8
SEGI_14650 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.7e-107 396.0 1059 30.0
SEGI_17338 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.7e-107 394.8 797 35.5
SEGI_38416 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 7.0e-106 390.6 1067 30.0
SEGI_05380 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 5.9e-105 387.5 332 61.7
SEGI_27704 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.4e-101 376.3 765 34.5
SEGI_41543 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.2e-98 365.2 693 36.8
SEGI_27891 Sequoiadendron giganteum HOM05D008033 ORTHO05D000004 1.7e-96 359.4 861 33.2
SEGI_34972 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.6e-92 345.5 556 37.9
SEGI_16158 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.6e-49 203.4 800 26.6
SEGI_25429 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.7e-41 176.0 661 25.0
SEGI_38881 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.9e-34 153.3 276 36.2
SEGI_26513 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.6e-33 150.2 188 50.5
SEGI_01193 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.1e-33 149.8 158 55.1
SEGI_28952 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.6e-33 149.1 159 47.2
SEGI_18707 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.5e-31 142.9 153 51.0
SEGI_37874 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 4.1e-29 135.6 104 67.3
SEGI_25935 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.9e-26 126.7 415 29.9
SEGI_14985 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.2e-26 125.9 132 54.5
SEGI_04171 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.6e-25 122.5 491 27.7
SEGI_04657 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.0e-24 119.4 325 30.2
SEGI_41503 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 9.4e-18 97.8 127 46.5
SEGI_23257 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.3e-15 89.4 280 28.6
SEGI_00569 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 2.2e-14 86.7 117 45.3
SEGI_37096 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 1.4e-13 84.0 109 41.3
SEGI_31284 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 3.5e-12 79.3 82 48.8
Rhsim05G0056400 Rhododendron simsii HOM05D000264 ORTHO05D000152 8.5e-11 74.7 339 27.1
Rhsim04G0191500 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.2e-10 72.4 354 24.9
SEGI_23709 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 1.6e-09 70.5 111 35.1
Mapoly0092s0081 Marchantia polymorpha HOM05D011467 ORTHO05D014661 2.1e-09 70.1 426 25.4
Lj3C489G7 Lonicera japonica HOM05D000264 ORTHO05D000152 1.8e-08 67.0 190 26.8
SEGI_10047 Sequoiadendron giganteum HOM05D008967 ORTHO05D385793 1.8e-08 67.0 85 43.5
Gohir.D10G243700 Gossypium hirsutum HOM05D000480 ORTHO05D000313 2.3e-08 66.6 211 30.3
Gorai.011G280100 Gossypium raimondii HOM05D000480 ORTHO05D000313 2.3e-08 66.6 211 30.3
Lj3C490G4 Lonicera japonica HOM05D000264 ORTHO05D000152 2.3e-08 66.6 190 26.8
SEGI_29973 Sequoiadendron giganteum HOM05D012352 ORTHO05D009960 3.0e-08 66.2 108 33.3
ATR1089G127 Amborella trichopoda HOM05D000413 ORTHO05D000292 6.8e-08 65.1 159 30.8
Carub.0007s2784 Capsella rubella HOM05D000264 ORTHO05D000152 8.8e-08 64.7 375 20.3
AagrBONN_evm.TU.Sc2ySwM_117.3077 Anthoceros agrestis HOM05D000413 ORTHO05D000292 2.6e-07 63.2 198 30.3
Duzib035G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 2.6e-07 63.2 180 28.3
Potri.003G018800 Populus trichocarpa HOM05D000413 ORTHO05D000292 3.4e-07 62.8 198 28.3
DCAR_013640 Daucus carota HOM05D000484 ORTHO05D000346 4.4e-07 62.4 348 24.1
FvH4_3g05910 Fragaria vesca HOM05D000264 ORTHO05D000152 4.4e-07 62.4 314 24.5
Os02g0493300 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 4.4e-07 62.4 254 26.4
SalBow7G4174 Salvia bowleyana HOM05D000097 ORTHO05D000041 4.4e-07 62.4 224 28.6
EL10Ac4g08363 Beta vulgaris HOM05D000264 ORTHO05D000152 5.7e-07 62.0 228 25.9
Carub.0006s3358 Capsella rubella HOM05D000264 ORTHO05D000152 5.7e-07 62.0 391 21.7
Duzib102G0001 Durio zibethinus HOM05D000264 ORTHO05D000152 5.7e-07 62.0 180 28.3
Lj3C493G8 Lonicera japonica HOM05D000264 ORTHO05D000152 5.7e-07 62.0 189 27.5
Lj3A465G34 Lonicera japonica HOM05D000264 ORTHO05D000152 7.5e-07 61.6 189 25.9
Rhsim11G0128100 Rhododendron simsii HOM05D000413 ORTHO05D000292 7.5e-07 61.6 142 32.4
RcHm_v2.0_Chr2g0097241 Rosa chinensis HOM05D000264 ORTHO05D000152 7.5e-07 61.6 213 27.2
SEGI_18020 Sequoiadendron giganteum HOM05D000038 ORTHO05D006899 7.5e-07 61.6 146 32.9
SEGI_11520 Sequoiadendron giganteum HOM05D000413 ORTHO05D000292 9.8e-07 61.2 198 27.8
Duzib177G0874 Durio zibethinus HOM05D000264 ORTHO05D000152 1.3e-06 60.8 380 24.5
Eucgr.K00673 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.3e-06 60.8 463 22.2
Solyc01g104030.3 Solanum lycopersicum HOM05D000413 ORTHO05D000292 1.3e-06 60.8 142 32.4
PGSC0003DMG400023769 Solanum tuberosum HOM05D000413 ORTHO05D000292 1.3e-06 60.8 142 32.4
Gorai.012G177500 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.7e-06 60.5 246 28.9
Gorai.012G176800 Gossypium raimondii HOM05D000264 ORTHO05D000152 2.8e-06 59.7 253 26.1
Cc11_g07820 Coffea canephora HOM05D000264 ORTHO05D000152 3.7e-06 59.3 280 23.6
Peaxi162Scf00011g00533 Petunia axillaris HOM05D000413 ORTHO05D000292 3.7e-06 59.3 142 31.0
Sed0008991 Sechium edule HOM05D003621 ORTHO05D004259 3.7e-06 59.3 227 26.4
arahy.Tifrunner.gnm1.ann1.R2WDYV Arachis hypogaea HOM05D000097 ORTHO05D000041 8.3e-06 58.2 190 24.2
SEGI_00695 Sequoiadendron giganteum HOM05D008033 ORTHO05D009960 8.3e-06 58.2 152 26.3


User provided reference genes

Program Settings