Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14421 Sequoiadendron giganteum HOM05D003025 ORTHO05D003305 0.0e+00 1798.9 1007 100.0
SEGI_31352 Sequoiadendron giganteum HOM05D063011 ORTHO05D000589 3.8e-10 71.6 68 47.1
Glyma.02G122700 Glycine max HOM05D003025 ORTHO05D003305 7.2e-09 67.4 62 54.8
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 9.4e-09 67.0 61 57.4
Lj2g0017874 Lotus japonicus HOM05D003025 ORTHO05D003305 9.4e-09 67.0 62 56.5
Potri.010G138100 Populus trichocarpa HOM05D003025 ORTHO05D003305 9.4e-09 67.0 61 57.4
arahy.Tifrunner.gnm1.ann1.161SS5 Arachis hypogaea HOM05D003025 ORTHO05D003305 1.2e-08 66.6 37 83.8
Duzib248G1661 Durio zibethinus HOM05D003025 ORTHO05D003305 1.2e-08 66.6 61 59.0
Lalb_Chr10g0099151 Lupinus albus HOM05D003025 ORTHO05D003305 1.2e-08 66.6 62 54.8
Lalb_Chr17g0341461 Lupinus albus HOM05D003025 ORTHO05D003305 1.2e-08 66.6 37 78.4
HPP92_015551 Vanilla planifolia HOM05D003025 ORTHO05D003305 1.6e-08 66.2 63 55.6
Glyma.01G064900 Glycine max HOM05D003025 ORTHO05D003305 2.1e-08 65.9 37 81.1
SEGI_24332 Sequoiadendron giganteum HOM05D066507 ORTHO05D003305 2.1e-08 65.9 111 41.4
VMungo1215G0401 Vigna mungo HOM05D003025 ORTHO05D003305 2.1e-08 65.9 37 81.1
Dinv38641 Davidia involucrata HOM05D003025 ORTHO05D003305 2.7e-08 65.5 68 51.5
Gohir.A03G106600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.6e-08 65.1 61 59.0
Gohir.D02G131800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.6e-08 65.1 61 59.0
Gorai.005G147700 Gossypium raimondii HOM05D003025 ORTHO05D003305 3.6e-08 65.1 61 59.0
COL.COLO4_27800 Corchorus olitorius HOM05D003025 ORTHO05D003305 6.1e-08 64.3 37 83.8
Gohir.A12G159500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 6.1e-08 64.3 37 86.5
Gohir.D12G162800 Gossypium hirsutum HOM05D003025 ORTHO05D003305 6.1e-08 64.3 37 86.5
Gorai.008G175400 Gossypium raimondii HOM05D003025 ORTHO05D003305 6.1e-08 64.3 37 86.5
Phvul.003G038300 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 6.1e-08 64.3 37 78.4
CSS0010260 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 7.9e-08 63.9 62 53.2
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 7.9e-08 63.9 61 57.4
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 7.9e-08 63.9 61 57.4
Potri.008G111800 Populus trichocarpa HOM05D003025 ORTHO05D003305 7.9e-08 63.9 61 57.4
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 1.0e-07 63.5 62 53.2
CDE10G0152 Ceratophyllum demersum HOM05D003025 ORTHO05D003305 1.0e-07 63.5 62 54.8
HanXRQChr08g0215591 Helianthus annuus HOM05D003025 ORTHO05D003305 1.0e-07 63.5 61 57.4
ClCG08G010610 Citrullus lanatus HOM05D003025 ORTHO05D003305 1.4e-07 63.2 62 53.2
CsaV3_6G033910 Cucumis sativus L. HOM05D003025 ORTHO05D003305 1.4e-07 63.2 62 53.2
Hma1.2p1_0428F.1_g150820 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 1.4e-07 63.2 61 55.7
Sed0016639 Sechium edule HOM05D003025 ORTHO05D003305 1.4e-07 63.2 59 57.6
vmacro01298 Vaccinium macrocarpon HOM05D003025 ORTHO05D003305 1.4e-07 63.2 57 56.1
VMungo0251G3127 Vigna mungo HOM05D003025 ORTHO05D003305 1.4e-07 63.2 36 80.6
Cc11_g11550 Coffea canephora HOM05D003025 ORTHO05D003305 1.8e-07 62.8 37 83.8
MELO3C011401.2 Cucumis melo HOM05D003025 ORTHO05D003305 1.8e-07 62.8 62 53.2
THA.LOC104824052 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 1.8e-07 62.8 61 54.1
TWI31G1177 Tripterygium wilfordii HOM05D003025 ORTHO05D003305 1.8e-07 62.8 61 55.7
Nitab4.5_0001071g0040 Nicotiana tabacum HOM05D003025 ORTHO05D003305 2.3e-07 62.4 59 54.2
Rhsim12G0071300 Rhododendron simsii HOM05D003025 ORTHO05D003305 2.3e-07 62.4 121 38.0
Thecc.02G322700 Theobroma cacao HOM05D003025 ORTHO05D003305 2.3e-07 62.4 61 55.7
Lj6A773T133 Lonicera japonica HOM05D003025 ORTHO05D003305 3.9e-07 61.6 61 54.1
PGR102G2660 Punica granatum HOM05D003025 ORTHO05D003305 3.9e-07 61.6 61 54.1
THA.LOC104805213 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 3.9e-07 61.6 37 78.4
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 5.1e-07 61.2 133 39.1
Oeu003749.3 Olea europaea HOM05D003025 ORTHO05D003305 5.1e-07 61.2 61 54.1
Sopen08g007090 Solanum pennellii HOM05D000047 ORTHO05D001383 5.1e-07 61.2 85 35.3
Hma1.2p1_0060F.1_g032730 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 6.7e-07 60.8 61 54.1
THA.LOC104801838 Tarenaya hassleriana HOM05D003025 ORTHO05D003305 6.7e-07 60.8 61 52.5
Migut.L01161 Erythranthe guttata HOM05D003025 ORTHO05D003305 8.8e-07 60.5 61 55.7
Sabra08G0084400 Salix brachista HOM05D003025 ORTHO05D003305 8.8e-07 60.5 61 54.1
SGA_v2.0_scaffold287G47189 Striga asiatica HOM05D003025 ORTHO05D003305 8.8e-07 60.5 37 78.4
Hund09959 Selenicereus undatus HOM05D003025 ORTHO05D003305 1.1e-06 60.1 63 54.0
Actinidia31928 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.5e-06 59.7 61 54.1
ECA234G4845 Erigeron canadensis HOM05D003025 ORTHO05D003305 1.5e-06 59.7 47 61.7
Oeu024157.1 Olea europaea HOM05D003025 ORTHO05D003305 1.5e-06 59.7 61 52.5
CiPaw.06G095000 Carya illinoinensis HOM05D003025 ORTHO05D003305 2.0e-06 59.3 61 52.5
Gorai.001G067100 Gossypium raimondii HOM05D003025 ORTHO05D003305 2.0e-06 59.3 97 38.1
SEGI_34323 Sequoiadendron giganteum HOM05D014790 ORTHO05D026141 2.0e-06 59.3 125 32.8
SGA_v2.0_scaffold16G07826 Striga asiatica HOM05D003025 ORTHO05D003305 2.0e-06 59.3 61 55.7
ClCG05G023550 Citrullus lanatus HOM05D003025 ORTHO05D003305 3.3e-06 58.5 62 53.2
Lalb_Chr04g0255461 Lupinus albus HOM05D003025 ORTHO05D003305 3.3e-06 58.5 233 30.0
MBI15_g31908_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 3.3e-06 58.5 37 78.4
PSO063G1603 Papaver somniferum HOM05D003025 ORTHO05D003305 3.3e-06 58.5 59 54.2
PSO782G5508 Papaver somniferum HOM05D003025 ORTHO05D003305 3.3e-06 58.5 59 54.2
BcaC06g31142 Brassica carinata HOM05D003025 ORTHO05D003305 4.4e-06 58.2 58 51.7
A06p42840 Brassica napus HOM05D003025 ORTHO05D003305 4.4e-06 58.2 58 51.7
BolC7t43953H Brassica oleracea HOM05D003025 ORTHO05D003305 4.4e-06 58.2 58 51.7
BraA06t27196Z Brassica rapa HOM05D003025 ORTHO05D003305 4.4e-06 58.2 58 51.7
CsaV3_5G033470 Cucumis sativus L. HOM05D003025 ORTHO05D003305 4.4e-06 58.2 62 54.8
DCAR_030058 Daucus carota HOM05D003025 ORTHO05D003305 4.4e-06 58.2 106 38.7
Gohir.A07G058700 Gossypium hirsutum HOM05D003025 ORTHO05D003305 4.4e-06 58.2 40 70.0
Gohir.D07G063600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 4.4e-06 58.2 40 70.0
HanXRQChr16g0528681 Helianthus annuus HOM05D003025 ORTHO05D003305 4.4e-06 58.2 61 52.5
PSO478G4016 Papaver somniferum HOM05D003025 ORTHO05D003305 5.7e-06 57.8 62 48.4
Sed0017206 Sechium edule HOM05D003025 ORTHO05D003305 5.7e-06 57.8 44 68.2
Manes.14G090300 Manihot esculenta HOM05D003025 ORTHO05D003305 7.4e-06 57.4 152 33.6
Oeu062245.1 Olea europaea HOM05D003025 ORTHO05D003305 7.4e-06 57.4 62 50.0
Prupe.1G293500 Prunus persica HOM05D003025 ORTHO05D003305 7.4e-06 57.4 57 50.9
Solyc04g005290.3 Solanum lycopersicum HOM05D003025 ORTHO05D003305 7.4e-06 57.4 59 49.2
Sopen04g001270 Solanum pennellii HOM05D003025 ORTHO05D003305 7.4e-06 57.4 59 49.2
Sopen05g020260 Solanum pennellii HOM05D000047 ORTHO05D000044 7.4e-06 57.4 85 32.9
PGSC0003DMG400001936 Solanum tuberosum HOM05D003025 ORTHO05D003305 7.4e-06 57.4 59 49.2
Actinidia07767 Actinidia chinensis HOM05D003025 ORTHO05D003305 9.7e-06 57.0 61 52.5
MSTRG.7727 Avicennia marina HOM05D003025 ORTHO05D003305 9.7e-06 57.0 61 52.5
PSO017G6048 Papaver somniferum HOM05D003025 ORTHO05D003305 9.7e-06 57.0 62 48.4
SEGI_37052 Sequoiadendron giganteum HOM05D014790 ORTHO05D000589 9.7e-06 57.0 131 29.8
Sc04g0007330 Simmondsia chinensis HOM05D003025 ORTHO05D003305 9.7e-06 57.0 61 49.2
Sopen01g006520 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen01g018560 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen02g002310 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 74 36.5
Sopen02g010170 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen03g014800 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen04g012780 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen04g021500 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen04g024170 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen05g018330 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen06g006890 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen06g009330 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen06g011440 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen07g006060 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen07g020380 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen08g008120 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-06 57.0 85 32.9
Sopen09g021660 Solanum pennellii HOM05D000004 ORTHO05D000002 9.7e-06 57.0 85 32.9
Sopen09g022170 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen10g013080 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
Sopen10g021270 Solanum pennellii HOM05D000047 ORTHO05D001383 9.7e-06 57.0 85 32.9
GSVIVG01010102001 Vitis vinifera HOM05D003025 ORTHO05D003305 9.7e-06 57.0 37 73.0


User provided reference genes

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