Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.0e-34 149.4 73 100.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.9e-21 104.8 55 85.5
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 5.0e-21 104.0 56 83.9
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 1.9e-20 102.1 53 83.0
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 3.3e-20 101.3 56 78.6
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.3e-20 101.3 56 78.6
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 3.3e-20 101.3 56 78.6
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 4.2e-20 100.9 58 72.4
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 5.5e-20 100.5 57 78.9
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 7.2e-20 100.1 57 73.7
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 7.2e-20 100.1 56 78.6
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 7.2e-20 100.1 55 76.4
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 7.2e-20 100.1 55 76.4
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 7.2e-20 100.1 55 72.7
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 9.5e-20 99.8 55 78.2
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 9.5e-20 99.8 54 81.5
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 9.5e-20 99.8 55 72.7
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 1.2e-19 99.4 56 73.2
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.2e-19 99.4 56 76.8
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 1.2e-19 99.4 57 75.4
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 1.2e-19 99.4 57 75.4
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 1.2e-19 99.4 55 74.5
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 1.6e-19 99.0 56 73.2
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.1e-19 98.6 57 73.7
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 2.1e-19 98.6 57 73.7
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 2.1e-19 98.6 55 76.4
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 2.8e-19 98.2 54 81.5
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.8e-19 98.2 54 79.6
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 3.6e-19 97.8 57 71.9
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 3.6e-19 97.8 54 77.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 3.6e-19 97.8 55 78.2
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 4.7e-19 97.4 55 78.2
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 4.7e-19 97.4 56 75.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 4.7e-19 97.4 54 79.6
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 6.1e-19 97.1 55 76.4
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 6.1e-19 97.1 58 69.0
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 1.0e-18 96.3 54 79.6
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.0e-18 96.3 53 77.4
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.0e-18 96.3 53 77.4
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 1.0e-18 96.3 54 74.1
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.4e-18 95.9 55 72.7
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 1.4e-18 95.9 54 75.9
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.4e-18 95.9 54 77.8
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.8e-18 95.5 54 75.9
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 1.8e-18 95.5 55 74.5
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 1.8e-18 95.5 53 77.4
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.3e-18 95.1 56 69.6
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.3e-18 95.1 57 71.9
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 2.3e-18 95.1 57 71.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 3.0e-18 94.7 53 75.5
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 3.0e-18 94.7 53 75.5
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.0e-18 94.4 55 70.9
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 4.0e-18 94.4 57 75.4
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 5.2e-18 94.0 54 75.9
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 5.2e-18 94.0 56 69.6
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 5.2e-18 94.0 57 68.4
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 5.2e-18 94.0 53 75.5
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 5.2e-18 94.0 53 79.2
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 5.2e-18 94.0 54 77.8
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 6.8e-18 93.6 54 75.9
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 6.8e-18 93.6 56 69.6
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 6.8e-18 93.6 54 74.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 1.2e-17 92.8 57 68.4
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.2e-17 92.8 53 73.6
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.2e-17 92.8 54 77.8
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-17 92.8 54 77.8
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-17 92.8 54 77.8
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.2e-17 92.8 53 77.4
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-17 92.4 55 70.9
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-17 92.4 55 70.9
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 1.5e-17 92.4 53 77.4
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.5e-17 92.4 55 70.9
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.5e-17 92.4 53 75.5
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.5e-17 92.4 54 74.1
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 1.5e-17 92.4 54 74.1
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 2.6e-17 91.7 54 74.1
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.4e-17 91.3 57 68.4
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 3.4e-17 91.3 57 64.9
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 3.4e-17 91.3 54 68.5
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 3.4e-17 91.3 56 71.4
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 4.4e-17 90.9 53 77.4
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 4.4e-17 90.9 53 75.5
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 7.5e-17 90.1 56 69.6
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 9.8e-17 89.7 53 75.5
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.3e-16 89.4 53 71.7
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.3e-16 89.4 53 71.7
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.3e-16 89.4 53 71.7
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 1.3e-16 89.4 56 66.1
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.7e-16 89.0 56 67.9
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.7e-16 89.0 54 72.2
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.7e-16 89.0 53 73.6
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 2.2e-16 88.6 50 72.0
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 2.8e-16 88.2 56 64.3
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 3.7e-16 87.8 49 79.6
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 4.9e-16 87.4 54 70.4
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 1.8e-15 85.5 53 66.0
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 2.4e-15 85.1 52 69.2
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 1.0e-13 79.7 50 64.0
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 8.6e-13 76.6 53 60.4
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.9e-12 75.5 44 72.7
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 2.0e-09 65.5 48 52.1
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.1e-07 57.8 54 55.6


User provided reference genes

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