Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14317 Sequoiadendron giganteum HOM05D000181 ORTHO05D007068 8.6e-35 149.8 79 100.0
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 9.6e-18 93.2 69 66.7
VMungo1127G1754 Vigna mungo HOM05D000004 ORTHO05D007068 2.8e-17 91.7 69 65.2
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 4.8e-17 90.9 69 62.3
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 6.2e-17 90.5 69 63.8
BcaB02g07225 Brassica carinata HOM05D000181 ORTHO05D007068 8.1e-17 90.1 69 66.7
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 8.1e-17 90.1 69 66.7
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 1.1e-16 89.7 69 65.2
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 1.1e-16 89.7 69 65.2
BraA07t30351Z Brassica rapa HOM05D000181 ORTHO05D007068 1.1e-16 89.7 69 65.2
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 1.1e-16 89.7 69 66.7
Sp5g34620 Schrenkiella parvula HOM05D000181 ORTHO05D007068 1.1e-16 89.7 69 66.7
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 66.7
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 60.9
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 60.9
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 60.9
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 62.3
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 1.4e-16 89.4 69 63.8
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 1.8e-16 89.0 69 65.2
Ca_25910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007068 1.8e-16 89.0 69 62.3
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 2.4e-16 88.6 69 62.3
Phvul.011G177500 Phaseolus vulgaris HOM05D000181 ORTHO05D007068 2.4e-16 88.6 69 62.3
TPR.G9423 Trifolium pratense HOM05D000181 ORTHO05D007068 2.4e-16 88.6 70 61.4
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 3.1e-16 88.2 69 60.9
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 4.0e-16 87.8 69 62.3
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 4.0e-16 87.8 69 60.9
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 4.0e-16 87.8 69 62.3
EL10Ac2g03239 Beta vulgaris HOM05D000181 ORTHO05D007068 5.3e-16 87.4 67 62.7
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 5.3e-16 87.4 69 60.9
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 6.9e-16 87.0 69 63.8
Medtr8g056860 Medicago truncatula HOM05D000181 ORTHO05D007068 6.9e-16 87.0 69 60.9
Aa31LG4G1430 Aethionema arabicum HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 62.3
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 60.9
Gorai.013G144900 Gossypium raimondii HOM05D000181 ORTHO05D007068 9.0e-16 86.7 80 55.0
Lalb_Chr01g0007221 Lupinus albus HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 60.9
Nn7g38234 Nelumbo nucifera HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 59.4
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 60.9
unitig_748.g7620 Utricularia gibba HOM05D000181 ORTHO05D007068 9.0e-16 86.7 69 60.9
arahy.Tifrunner.gnm1.ann1.1IB7AW Arachis hypogaea HOM05D000181 ORTHO05D007068 1.2e-15 86.3 69 60.9
arahy.Tifrunner.gnm1.ann1.HBHB6G Arachis hypogaea HOM05D000181 ORTHO05D007068 1.2e-15 86.3 69 60.9
MSTRG.7078 Avicennia marina HOM05D000181 ORTHO05D007068 1.2e-15 86.3 69 59.4
CAN.G891.3 Capsicum annuum HOM05D000181 ORTHO05D007068 1.5e-15 85.9 69 63.8
Gohir.A13G125100 Gossypium hirsutum HOM05D000181 ORTHO05D007068 1.5e-15 85.9 69 59.4
Nitab4.5_0021524g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 1.5e-15 85.9 77 59.7
Gohir.D13G128800 Gossypium hirsutum HOM05D000181 ORTHO05D007068 2.0e-15 85.5 80 55.0
CDE06G0559 Ceratophyllum demersum HOM05D000181 ORTHO05D007068 2.6e-15 85.1 69 59.4
AUR62032086 Chenopodium quinoa HOM05D000181 ORTHO05D007068 2.6e-15 85.1 67 59.7
DCAR_013723 Daucus carota HOM05D000181 ORTHO05D007068 2.6e-15 85.1 69 62.3
HanXRQChr03g0078201 Helianthus annuus HOM05D000181 ORTHO05D007068 2.6e-15 85.1 69 62.3
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 3.4e-15 84.7 68 61.8
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 3.4e-15 84.7 69 60.9
AUR62040740 Chenopodium quinoa HOM05D000181 ORTHO05D007068 3.4e-15 84.7 67 58.2
Haze_07800 Corylus avellana HOM05D000181 ORTHO05D007068 3.4e-15 84.7 69 59.4
Nitab4.5_0006529g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 3.4e-15 84.7 69 62.3
Peaxi162Scf00006g01615 Petunia axillaris HOM05D000181 ORTHO05D007068 3.4e-15 84.7 69 62.3
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 4.5e-15 84.3 69 59.4
GSVIVG01019160001 Vitis vinifera HOM05D000181 ORTHO05D007068 4.5e-15 84.3 68 61.8
AagrBONN_evm.TU.Sc2ySwM_344.4106 Anthoceros agrestis HOM05D000181 ORTHO05D007068 5.8e-15 84.0 66 62.1
CARHR073220 Cardamine hirsuta HOM05D000181 ORTHO05D007068 5.8e-15 84.0 69 62.3
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 5.8e-15 84.0 69 59.4
ATR0752G106 Amborella trichopoda HOM05D000181 ORTHO05D007068 7.6e-15 83.6 69 60.9
Pp3c7_7530 Physcomitrium patens HOM05D000181 ORTHO05D007068 7.6e-15 83.6 66 63.6
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 7.6e-15 83.6 67 59.7
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 7.6e-15 83.6 68 60.3
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 9.9e-15 83.2 69 58.0
Eucgr.F04462 Eucalyptus grandis HOM05D000181 ORTHO05D007068 9.9e-15 83.2 69 60.9
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 9.9e-15 83.2 69 60.9
Sc10g0005160 Simmondsia chinensis HOM05D000181 ORTHO05D007068 9.9e-15 83.2 69 59.4
Solyc02g079000.4 Solanum lycopersicum HOM05D000181 ORTHO05D007068 1.3e-14 82.8 69 60.9
Sopen02g023810 Solanum pennellii HOM05D000181 ORTHO05D007068 1.3e-14 82.8 69 60.9
Psat4g137600 Pisum sativum HOM05D000181 ORTHO05D007068 1.7e-14 82.4 69 58.0
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 1.7e-14 82.4 69 59.4
Cc04_g12710 Coffea canephora HOM05D000181 ORTHO05D007068 2.9e-14 81.6 69 59.4
ECA240G0620 Erigeron canadensis HOM05D000181 ORTHO05D007068 2.9e-14 81.6 69 59.4
Mapoly0006s0083 Marchantia polymorpha HOM05D000181 ORTHO05D007068 2.9e-14 81.6 67 58.2
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 2.9e-14 81.6 69 58.0
Cc05_g01550 Coffea canephora HOM05D000181 ORTHO05D007068 3.8e-14 81.3 69 59.4
Migut.M01524 Erythranthe guttata HOM05D000181 ORTHO05D007068 3.8e-14 81.3 67 58.2
Oeu034062.1 Olea europaea HOM05D000181 ORTHO05D007068 3.8e-14 81.3 69 58.0
CiPaw.11G060900 Carya illinoinensis HOM05D000181 ORTHO05D007068 4.9e-14 80.9 69 56.5
ClCG02G018660 Citrullus lanatus HOM05D000181 ORTHO05D007068 4.9e-14 80.9 69 53.6
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 8.4e-14 80.1 69 56.5
MELO3C019635.2 Cucumis melo HOM05D000181 ORTHO05D007068 8.4e-14 80.1 69 55.1
PGR031G2481 Punica granatum HOM05D000181 ORTHO05D007068 1.1e-13 79.7 69 58.0
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 1.4e-13 79.3 69 52.2
CAN.G1460.1 Capsicum annuum HOM05D000181 ORTHO05D007068 1.9e-13 79.0 69 59.4
SGA_v2.0_scaffold7G03612 Striga asiatica HOM05D000181 ORTHO05D007068 1.9e-13 79.0 66 57.6
Cpa.g.sc32.46 Carica papaya HOM05D000181 ORTHO05D007068 2.4e-13 78.6 69 53.6
COL.COLO4_19750 Corchorus olitorius HOM05D000181 ORTHO05D007068 5.4e-13 77.4 64 59.4
Cc04_g12770 Coffea canephora HOM05D000181 ORTHO05D007068 7.1e-13 77.0 62 62.9
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 9.3e-13 76.6 68 58.8
CsaV3_6G013510 Cucumis sativus L. HOM05D000181 ORTHO05D007068 1.6e-12 75.9 69 52.2
Lj2C14G7 Lonicera japonica HOM05D000181 ORTHO05D007068 2.1e-12 75.5 67 58.2
HPP92_000846 Vanilla planifolia HOM05D000181 ORTHO05D007068 2.1e-12 75.5 69 52.2
GSVIVG01026110001 Vitis vinifera HOM05D000181 ORTHO05D007068 4.8e-09 64.3 52 61.5
SMO356G0491 Selaginella moellendorffii HOM05D000181 ORTHO05D007068 8.1e-09 63.5 76 46.1
CBR_g10946 Chara braunii HOM05D000181 ORTHO05D007068 2.4e-08 62.0 65 44.6
Oeu044451.1 Olea europaea HOM05D000181 ORTHO05D007068 1.5e-07 59.3 50 56.0


User provided reference genes

Program Settings