Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14316 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 0.0e+00 1819.3 931 100.0
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 4.5e-311 1071.2 886 62.1
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 6.7e-304 1047.3 886 62.1
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 1.4e-296 1023.1 896 58.9
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 8.8e-296 1020.4 887 60.3
Thecc.09G254300 Theobroma cacao HOM05D004500 ORTHO05D005775 2.8e-294 1015.4 886 59.6
Gohir.A09G108500 Gossypium hirsutum HOM05D004500 ORTHO05D005775 1.1e-293 1013.4 886 59.4
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 5.4e-293 1011.1 886 59.4
PSO339G3895 Papaver somniferum HOM05D004500 ORTHO05D005775 9.1e-293 1010.4 886 59.5
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 1.2e-292 1010.0 886 58.6
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 1.0e-291 1006.9 886 59.0
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 6.1e-289 997.7 886 58.9
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 6.1e-289 997.7 886 58.4
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 8.0e-289 997.3 893 59.4
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 1.8e-288 996.1 886 57.8
Solyc11g062310.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 2.3e-288 995.7 886 58.0
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 3.0e-288 995.3 886 59.7
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 8.8e-288 993.8 886 57.9
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 2.6e-287 992.3 886 57.8
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 1.7e-286 989.6 887 58.6
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 2.8e-286 988.8 886 57.7
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 6.3e-286 987.6 887 58.5
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 2.4e-285 985.7 886 58.5
Peaxi162Scf00029g02524 Petunia axillaris HOM05D004500 ORTHO05D005775 5.4e-285 984.6 887 58.3
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 1.6e-284 983.0 886 58.6
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 1.6e-284 983.0 886 57.0
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 2.0e-284 982.6 887 57.3
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 3.5e-284 981.9 886 57.4
COL.COLO4_06617 Corchorus olitorius HOM05D004500 ORTHO05D005775 4.5e-284 981.5 887 57.4
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 2.3e-283 979.2 886 57.6
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 2.3e-283 979.2 886 57.7
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 2.9e-283 978.8 886 57.9
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 3.8e-283 978.4 886 57.6
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 6.6e-283 977.6 886 56.9
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 1.1e-282 976.9 886 57.0
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 1.9e-282 976.1 886 56.8
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 1.9e-282 976.1 886 57.4
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 3.3e-282 975.3 886 56.7
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 3.3e-282 975.3 886 57.6
DCAR_023834 Daucus carota HOM05D004500 ORTHO05D005775 4.2e-282 974.9 887 57.8
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 7.2e-282 974.2 886 57.1
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 9.5e-282 973.8 886 57.2
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 1.6e-281 973.0 886 57.1
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 2.1e-281 972.6 886 57.6
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 2.1e-281 972.6 886 57.2
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 1.4e-280 969.9 887 57.7
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 3.0e-280 968.8 886 56.9
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 3.4e-279 965.3 888 56.0
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 5.7e-279 964.5 886 56.3
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 9.8e-279 963.8 890 56.2
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 2.9e-278 962.2 886 56.4
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 6.3e-278 961.1 914 55.9
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 2.4e-277 959.1 886 57.1
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 3.2e-277 958.7 886 56.1
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 4.1e-277 958.4 890 56.2
Haze_23271 Corylus avellana HOM05D004500 ORTHO05D005775 4.1e-277 958.4 886 56.5
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 7.0e-277 957.6 886 56.5
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 2.7e-276 955.7 886 56.2
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 3.5e-276 955.3 886 56.4
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 7.8e-276 954.1 886 56.5
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 7.8e-276 954.1 889 56.0
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 1.0e-275 953.7 886 56.7
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 1.3e-275 953.4 886 56.4
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 5.0e-275 951.4 888 55.6
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.5e-274 949.9 887 55.2
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 1.5e-274 949.9 888 55.6
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 1.9e-274 949.5 888 55.6
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 4.3e-274 948.3 887 55.1
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 7.3e-274 947.6 886 55.6
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 1.2e-273 946.8 888 55.5
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 1.6e-273 946.4 887 55.2
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 1.4e-272 943.3 887 54.7
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 5.2e-272 941.4 886 55.6
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 8.9e-272 940.6 888 55.5
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 2.0e-271 939.5 887 55.4
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 2.6e-271 939.1 886 55.9
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 1.3e-270 936.8 888 55.0
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 3.7e-270 935.3 888 55.1
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 5.4e-269 931.4 889 55.2
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 5.4e-269 931.4 925 54.4
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 6.0e-268 927.9 873 55.4
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 2.3e-267 926.0 889 55.3
Lj1C1068G11 Lonicera japonica HOM05D004500 ORTHO05D005775 1.6e-265 919.8 887 56.1
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 8.1e-265 917.5 870 55.1
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 6.8e-264 914.4 889 53.8
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 3.5e-260 902.1 1058 47.3
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 2.1e-257 892.9 917 53.2
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 3.4e-255 885.6 886 53.0
Ah.06g194800 Amaranthus hybridus HOM05D004500 ORTHO05D005775 1.4e-253 880.2 754 59.7
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 5.2e-248 861.7 909 52.1
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 4.0e-232 808.9 668 61.5
CDE02G2423 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 2.2e-230 803.1 890 49.9
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 2.2e-230 803.1 888 49.8
Nitab4.5_0002026g0140 Nicotiana tabacum HOM05D004500 ORTHO05D005775 3.9e-227 792.3 668 61.1
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 1.8e-208 730.3 704 55.5
Os12g0134200 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 8.8e-187 658.3 434 72.4
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 1.8e-171 607.4 908 39.6
Psat7g231400 Pisum sativum HOM05D004500 ORTHO05D005775 8.8e-171 605.1 654 50.8
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.3e-169 601.3 661 48.6
Cpa.g.sc34.186 Carica papaya HOM05D004500 ORTHO05D005775 3.7e-161 573.2 544 55.0
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 4.9e-161 572.8 890 40.6
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 3.3e-157 560.1 908 37.9
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 1.3e-142 511.5 911 35.2
Psat7g231320 Pisum sativum HOM05D004500 ORTHO05D005775 8.9e-131 472.2 499 51.9
Psat6g216840 Pisum sativum HOM05D004500 ORTHO05D005775 5.8e-122 443.0 321 68.5
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 1.2e-111 408.7 583 41.0
Cfa026787 Carpinus fangiana HOM05D004500 ORTHO05D005775 2.6e-74 284.6 436 35.8
vmacro04082 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 1.6e-71 275.4 161 80.1
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 9.7e-69 266.2 419 37.7
vmacro04081 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 2.7e-66 258.1 184 69.6
SEGI_03367 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 8.5e-65 253.1 133 94.7
Cpa.g.sc34.185 Carica papaya HOM05D004500 ORTHO05D005775 5.0e-57 227.3 168 67.3
Psat6g216720 Pisum sativum HOM05D004500 ORTHO05D005775 6.4e-36 157.1 130 62.3
Psat0s1467g0200 Pisum sativum HOM05D004500 ORTHO05D005775 1.2e-29 136.3 158 49.4
Psat5g143880 Pisum sativum HOM05D004500 ORTHO05D001434 1.2e-29 136.3 158 49.4
VMungo0647G0474 Vigna mungo HOM05D004500 ORTHO05D005775 7.8e-26 123.6 167 44.9
Psat2g099920 Pisum sativum HOM05D001218 ORTHO05D015696 4.7e-23 114.4 84 65.5
arahy.Tifrunner.gnm1.ann1.K04MEX Arachis hypogaea HOM05D004500 ORTHO05D005775 5.2e-22 110.9 121 51.2
Psat2g090360 Pisum sativum HOM05D001218 ORTHO05D015696 3.4e-21 108.2 73 69.9
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 2.9e-20 105.1 185 35.1
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 6.6e-17 94.0 181 36.5
Psat0s2295g0160 Pisum sativum HOM05D003609 ORTHO05D004185 7.1e-11 73.9 100 49.0


User provided reference genes

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