Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 9.7e-300 1032.7 526 100.0
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 4.2e-85 319.7 166 100.0
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.4e-26 124.0 102 59.8
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.0e-22 110.9 94 58.5
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 2.3e-11 74.7 113 40.7
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 3.1e-11 74.3 96 45.8
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 1.2e-10 72.4 117 43.6
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.5e-10 72.0 109 39.4
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 1.5e-10 72.0 69 50.7
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 1.5e-10 72.0 59 61.0
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 2.6e-10 71.2 117 38.5
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 4.4e-10 70.5 157 35.0
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 1.3e-09 68.9 129 38.8
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 1.3e-09 68.9 58 56.9
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 1.3e-09 68.9 211 34.1
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 1.7e-09 68.6 117 41.9
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.7e-09 68.6 120 35.8
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 1.7e-09 68.6 85 44.7
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.2e-09 68.2 184 32.1
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.2e-09 68.2 159 35.2
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.8e-09 67.4 65 52.3
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 3.8e-09 67.4 116 43.1
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 6.4e-09 66.6 62 51.6
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 6.4e-09 66.6 62 51.6
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.4e-09 66.6 213 31.9
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 6.4e-09 66.6 117 36.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 6.4e-09 66.6 112 38.4
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 1.1e-08 65.9 212 29.7
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.1e-08 65.9 105 39.0
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.2e-08 64.3 66 50.0
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 4.1e-08 63.9 173 28.3
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 4.1e-08 63.9 101 41.6
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 4.1e-08 63.9 70 52.9
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 5.4e-08 63.5 111 38.7
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 5.4e-08 63.5 111 38.7
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 5.4e-08 63.5 178 30.3
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 5.4e-08 63.5 96 43.8
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 7.1e-08 63.2 111 38.7
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 7.1e-08 63.2 111 38.7
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 7.1e-08 63.2 111 38.7
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 7.1e-08 63.2 112 40.2
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 9.2e-08 62.8 154 33.8
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 9.2e-08 62.8 109 41.3
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.2e-07 62.4 136 34.6
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.6e-07 62.0 101 40.6
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 2.1e-07 61.6 157 32.5
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 2.1e-07 61.6 45 55.6
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 3.5e-07 60.8 212 29.2
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 3.5e-07 60.8 114 38.6
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 6.0e-07 60.1 164 34.8
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 7.8e-07 59.7 72 47.2
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 7.8e-07 59.7 109 38.5
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 1.0e-06 59.3 217 29.5
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.0e-06 59.3 80 46.2
AagrBONN_evm.TU.Sc2ySwM_228.5650 Anthoceros agrestis HOM05D017655 ORTHO05D008750 1.7e-06 58.5 233 30.0
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 1.7e-06 58.5 115 36.5
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 2.3e-06 58.2 89 41.6
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 2.3e-06 58.2 120 33.3
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 3.0e-06 57.8 56 53.6
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 3.0e-06 57.8 201 28.9
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 3.0e-06 57.8 63 44.4
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 3.9e-06 57.4 62 50.0
Cre11.g467641 Chlamydomonas reinhardtii HOM05D017655 ORTHO05D008750 3.9e-06 57.4 91 37.4
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 3.9e-06 57.4 157 31.8
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.9e-06 57.4 86 44.2
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 5.1e-06 57.0 114 35.1
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 5.1e-06 57.0 176 29.5
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 5.1e-06 57.0 176 29.5
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 5.1e-06 57.0 136 34.6


User provided reference genes

Program Settings