Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14249 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 1.0e-85 320.1 165 100.0
SEGI_04052 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 5.8e-57 224.6 118 96.6
TAR625G0125 Trochodendron aralioides HOM05D003731 ORTHO05D004429 5.1e-45 184.9 112 82.1
CsaV3_7G033680 Cucumis sativus L. HOM05D003731 ORTHO05D004429 3.3e-44 182.2 109 82.6
Potri.008G006400 Populus trichocarpa HOM05D003731 ORTHO05D004429 5.6e-44 181.4 109 82.6
RcHm_v2.0_Chr2g0149681 Rosa chinensis HOM05D003731 ORTHO05D004429 5.6e-44 181.4 111 81.1
ATR0626G101 Amborella trichopoda HOM05D003731 ORTHO05D004429 7.3e-44 181.0 109 80.7
Dinv37787 Davidia involucrata HOM05D003731 ORTHO05D004429 9.5e-44 180.6 116 76.7
Hma1.2p1_0517F.1_g170700 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 1.2e-43 180.3 111 80.2
Sabra08G0003400 Salix brachista HOM05D003731 ORTHO05D004429 1.2e-43 180.3 109 81.7
MELO3C024281.2 Cucumis melo HOM05D003731 ORTHO05D004429 1.6e-43 179.9 109 81.7
Dinv20345 Davidia involucrata HOM05D003731 ORTHO05D008196 2.8e-43 179.1 111 79.3
Nn8g40740 Nelumbo nucifera HOM05D003731 ORTHO05D004429 2.8e-43 179.1 112 79.5
Potri.010G252300 Populus trichocarpa HOM05D003731 ORTHO05D004429 2.8e-43 179.1 109 82.6
MD17G1147200 Malus domestica HOM05D003731 ORTHO05D004429 4.7e-43 178.3 111 79.3
FAN09G0689 Fragaria x ananassa HOM05D003731 ORTHO05D004429 6.2e-43 177.9 111 80.2
Prupe.3G020500 Prunus persica HOM05D003731 ORTHO05D004429 6.2e-43 177.9 111 78.4
Migut.I01187 Erythranthe guttata HOM05D003731 ORTHO05D004429 8.1e-43 177.6 111 78.4
MD09G1161400 Malus domestica HOM05D003731 ORTHO05D004429 8.1e-43 177.6 111 78.4
CANSAT01G0693 Cannabis sativa HOM05D003731 ORTHO05D004429 1.1e-42 177.2 109 79.8
FAN02G2868 Fragaria x ananassa HOM05D003731 ORTHO05D004429 1.1e-42 177.2 111 79.3
FvH4_6g37120 Fragaria vesca HOM05D003731 ORTHO05D004429 1.4e-42 176.8 111 79.3
FAN14G5835 Fragaria x ananassa HOM05D003731 ORTHO05D004429 1.4e-42 176.8 111 79.3
QL05p083882 Quercus lobata HOM05D003731 ORTHO05D004429 1.4e-42 176.8 111 79.3
Haze_16281 Corylus avellana HOM05D003731 ORTHO05D004429 1.8e-42 176.4 111 79.3
FAN05G3538 Fragaria x ananassa HOM05D003731 ORTHO05D004429 1.8e-42 176.4 109 79.8
MBI16_g05829_MAGBIO Magnolia biondii HOM05D003731 ORTHO05D004429 1.8e-42 176.4 112 77.7
Cfa002143 Carpinus fangiana HOM05D003731 ORTHO05D004429 2.3e-42 176.0 116 76.7
CiPaw.01G089700 Carya illinoinensis HOM05D003731 ORTHO05D004429 3.1e-42 175.6 116 76.7
MSTRG.22505 Avicennia marina HOM05D003731 ORTHO05D004429 4.0e-42 175.3 111 76.6
Lalb_Chr01g0011841 Lupinus albus HOM05D003731 ORTHO05D004429 4.0e-42 175.3 109 78.9
Peaxi162Scf00038g02535 Petunia axillaris HOM05D003731 ORTHO05D004429 4.0e-42 175.3 106 79.2
Peaxi162Scf00207g01628 Petunia axillaris HOM05D003731 ORTHO05D004429 4.0e-42 175.3 106 80.2
Sed0015920 Sechium edule HOM05D003731 ORTHO05D004429 4.0e-42 175.3 109 79.8
HPP92_028311 Vanilla planifolia HOM05D003731 ORTHO05D004429 4.0e-42 175.3 137 65.0
Actinidia31131 Actinidia chinensis HOM05D003731 ORTHO05D004429 5.2e-42 174.9 116 75.9
Eucgr.F04024 Eucalyptus grandis HOM05D003731 ORTHO05D004429 5.2e-42 174.9 109 78.0
Hma1.2p1_1111F.1_g258350 Hydrangea macrophylla HOM05D003731 ORTHO05D004429 5.2e-42 174.9 111 76.6
PSO170G0363 Papaver somniferum HOM05D003731 ORTHO05D004429 5.2e-42 174.9 133 65.4
C01p43100 Brassica napus HOM05D003731 ORTHO05D004429 6.8e-42 174.5 111 76.6
Cc04_g00280 Coffea canephora HOM05D003731 ORTHO05D004429 6.8e-42 174.5 111 77.5
Atru.chr1.2721 Acer truncatum HOM05D003731 ORTHO05D004429 8.9e-42 174.1 109 77.1
A03p42050 Brassica napus HOM05D003731 ORTHO05D004429 1.2e-41 173.7 111 76.6
BraA03t13359Z Brassica rapa HOM05D003731 ORTHO05D004429 1.5e-41 173.3 111 75.7
Lj9A542G26 Lonicera japonica HOM05D003731 ORTHO05D004429 1.5e-41 173.3 109 78.0
Nitab4.5_0002354g0040 Nicotiana tabacum HOM05D003731 ORTHO05D004429 1.5e-41 173.3 108 77.8
BcaC09g49052 Brassica carinata HOM05D003731 ORTHO05D004429 2.0e-41 172.9 111 75.7
Hund05680 Selenicereus undatus HOM05D003731 ORTHO05D004429 2.0e-41 172.9 116 74.1
GSVIVG01029573001 Vitis vinifera HOM05D003731 ORTHO05D004429 2.0e-41 172.9 116 74.1
AL3G35080 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 2.6e-41 172.6 111 75.7
Manes.16G046301 Manihot esculenta HOM05D003731 ORTHO05D004429 2.6e-41 172.6 109 78.9
PSO063G0738 Papaver somniferum HOM05D003731 ORTHO05D004429 2.6e-41 172.6 133 64.7
Phvul.008G254200 Phaseolus vulgaris HOM05D003731 ORTHO05D004429 2.6e-41 172.6 109 78.0
Rhsim08G0249300 Rhododendron simsii HOM05D003731 ORTHO05D004429 2.6e-41 172.6 111 77.5
Aqoxy7G02835 Aquilegia oxysepala HOM05D003731 ORTHO05D004429 3.4e-41 172.2 113 77.0
AT3G21140 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 3.4e-41 172.2 111 74.8
C03p51470 Brassica napus HOM05D003731 ORTHO05D004429 3.4e-41 172.2 111 74.8
Thhalv10020874m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 3.4e-41 172.2 111 75.7
Nitab4.5_0006975g0010 Nicotiana tabacum HOM05D003731 ORTHO05D004429 3.4e-41 172.2 108 75.9
Oeu050745.3 Olea europaea HOM05D003731 ORTHO05D004429 3.4e-41 172.2 111 74.8
A01p33720 Brassica napus HOM05D003731 ORTHO05D004429 4.4e-41 171.8 111 75.7
BraA05t21647Z Brassica rapa HOM05D003731 ORTHO05D004429 4.4e-41 171.8 111 75.7
Glyma.07G020600 Glycine max HOM05D003731 ORTHO05D004429 4.4e-41 171.8 109 78.0
Oeu001813.1 Olea europaea HOM05D003731 ORTHO05D004429 4.4e-41 171.8 116 72.4
vmacro18751 Vaccinium macrocarpon HOM05D003731 ORTHO05D004429 4.4e-41 171.8 111 76.6
VMungo0647G1366 Vigna mungo HOM05D003731 ORTHO05D004429 4.4e-41 171.8 109 78.0
Glyma.08G221400 Glycine max HOM05D003731 ORTHO05D004429 5.8e-41 171.4 109 78.0
Solyc06g063290.3 Solanum lycopersicum HOM05D003731 ORTHO05D004429 5.8e-41 171.4 108 77.8
Sopen06g022750 Solanum pennellii HOM05D003731 ORTHO05D004429 5.8e-41 171.4 108 77.8
THA.LOC104817922 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 5.8e-41 171.4 109 78.0
TWI12G0642 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 5.8e-41 171.4 109 78.0
CSS0017795 Camellia sinensis var. sinensis HOM05D003731 ORTHO05D004429 7.6e-41 171.0 111 78.4
Ca_20505_v3 Cicer arietinum L. HOM05D003731 ORTHO05D004429 7.6e-41 171.0 109 78.0
Medtr4g007990 Medicago truncatula HOM05D003731 ORTHO05D004429 7.6e-41 171.0 109 78.0
Aa31LG10G3210 Aethionema arabicum HOM05D003731 ORTHO05D004429 9.9e-41 170.6 111 75.7
SGA_v2.0_scaffold122G33277 Striga asiatica HOM05D003731 ORTHO05D004429 9.9e-41 170.6 116 73.3
BcaB06g26184 Brassica carinata HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 74.8
BcaC01g03525 Brassica carinata HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 73.9
BcaC05g28253 Brassica carinata HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 74.8
A05p27580 Brassica napus HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 74.8
C05p42680 Brassica napus HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 74.8
BolC3t17432H Brassica oleracea HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 73.9
BolC5t32990H Brassica oleracea HOM05D003731 ORTHO05D004429 1.3e-40 170.2 111 74.8
Lj3g0007083 Lotus japonicus HOM05D003731 ORTHO05D004429 1.3e-40 170.2 109 76.1
AL1G59450 Arabidopsis lyrata HOM05D003731 ORTHO05D004429 1.7e-40 169.9 109 76.1
BolC1t04257H Brassica oleracea HOM05D003731 ORTHO05D004429 1.7e-40 169.9 111 74.8
BraA01t03485Z Brassica rapa HOM05D003731 ORTHO05D004429 1.7e-40 169.9 111 74.8
CARHR041710 Cardamine hirsuta HOM05D003731 ORTHO05D004429 1.7e-40 169.9 109 76.1
COL.COLO4_31180 Corchorus olitorius HOM05D003731 ORTHO05D004429 1.7e-40 169.9 109 77.1
DCAR_022617 Daucus carota HOM05D003731 ORTHO05D004429 1.7e-40 169.9 111 74.8
PGSC0003DMG401026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 1.7e-40 169.9 108 76.9
PGSC0003DMG402026514 Solanum tuberosum HOM05D003731 ORTHO05D004429 1.7e-40 169.9 108 76.9
TPR.G24561 Trifolium pratense HOM05D003731 ORTHO05D004429 1.7e-40 169.9 107 78.5
HanXRQChr02g0032091 Helianthus annuus HOM05D003731 ORTHO05D004429 2.2e-40 169.5 111 76.6
BcaB04g19144 Brassica carinata HOM05D003731 ORTHO05D004429 2.9e-40 169.1 111 74.8
Gohir.D02G107500 Gossypium hirsutum HOM05D003731 ORTHO05D004429 2.9e-40 169.1 109 78.0
Gorai.005G122100 Gossypium raimondii HOM05D003731 ORTHO05D004429 2.9e-40 169.1 109 78.0
Nitab4.5_0003757g0080 Nicotiana tabacum HOM05D003731 ORTHO05D004429 2.9e-40 169.1 111 76.6
SGA_v2.0_scaffold71G23998 Striga asiatica HOM05D003731 ORTHO05D004429 3.8e-40 168.7 111 73.9
arahy.Tifrunner.gnm1.ann1.T57K28 Arachis hypogaea HOM05D003731 ORTHO05D004429 4.9e-40 168.3 110 77.3
CAN.G308.12 Capsicum annuum HOM05D003731 ORTHO05D004429 4.9e-40 168.3 108 76.9
Lsat_1_v5_gn_1_39481 Lactuca sativa HOM05D003731 ORTHO05D004429 6.4e-40 167.9 107 77.6
Nitab4.5_0001691g0190 Nicotiana tabacum HOM05D003731 ORTHO05D004429 6.4e-40 167.9 111 73.9
Os08g0517500 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 6.4e-40 167.9 119 70.6
Sp3g19100 Schrenkiella parvula HOM05D003731 ORTHO05D004429 6.4e-40 167.9 112 74.1
CDE05G0121 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 8.4e-40 167.5 108 76.9
AT1G51560 Arabidopsis thaliana HOM05D003731 ORTHO05D004429 1.1e-39 167.2 109 74.3
Duzib235G1293 Durio zibethinus HOM05D003731 ORTHO05D004429 1.4e-39 166.8 109 77.1
PGR102G1715 Punica granatum HOM05D003731 ORTHO05D004429 1.4e-39 166.8 109 73.4
Sp1g38210 Schrenkiella parvula HOM05D003731 ORTHO05D004429 1.4e-39 166.8 109 75.2
arahy.Tifrunner.gnm1.ann1.C9Z78F Arachis hypogaea HOM05D003731 ORTHO05D004429 1.9e-39 166.4 110 76.4
Thhalv10011555m.g Eutrema salsugineum HOM05D003731 ORTHO05D004429 1.9e-39 166.4 109 74.3
Gohir.D05G114600 Gossypium hirsutum HOM05D003731 ORTHO05D004429 1.9e-39 166.4 109 76.1
Gorai.009G118800 Gossypium raimondii HOM05D003731 ORTHO05D004429 1.9e-39 166.4 109 76.1
Lj5A23G26 Lonicera japonica HOM05D003731 ORTHO05D004429 2.4e-39 166.0 112 76.8
A05p19510 Brassica napus HOM05D003731 ORTHO05D004429 3.2e-39 165.6 109 73.4
BraA05t20855Z Brassica rapa HOM05D003731 ORTHO05D004429 3.2e-39 165.6 109 73.4
CDE05G0113 Ceratophyllum demersum HOM05D003731 ORTHO05D004429 3.2e-39 165.6 115 71.3
Gohir.A05G114300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 5.4e-39 164.9 109 75.2
TWI18G0412 Tripterygium wilfordii HOM05D003731 ORTHO05D004429 5.4e-39 164.9 109 76.1
BcaC08g43921 Brassica carinata HOM05D003731 ORTHO05D004429 7.1e-39 164.5 109 72.5
C06p13140 Brassica napus HOM05D003731 ORTHO05D004429 7.1e-39 164.5 109 72.5
BolC6t36470H Brassica oleracea HOM05D003731 ORTHO05D004429 7.1e-39 164.5 109 72.5
Carub.0001s4041 Capsella rubella HOM05D003731 ORTHO05D004429 7.1e-39 164.5 109 72.5
CARHR097000 Cardamine hirsuta HOM05D003731 ORTHO05D004429 9.2e-39 164.1 112 71.4
Os02g0148400 Oryza sativa ssp. japonica HOM05D003731 ORTHO05D004429 9.2e-39 164.1 111 72.1
HPP92_010289 Vanilla planifolia HOM05D003731 ORTHO05D004429 9.2e-39 164.1 118 69.5
THA.LOC104798773 Tarenaya hassleriana HOM05D003731 ORTHO05D004429 1.6e-38 163.3 109 74.3
Ah.08g217760 Amaranthus hybridus HOM05D003731 ORTHO05D008196 2.1e-38 162.9 109 69.7
EL10Ac7g18173 Beta vulgaris HOM05D003731 ORTHO05D004429 2.1e-38 162.9 109 71.6
Zm00001eb035800 Zea mays HOM05D003731 ORTHO05D004429 2.7e-38 162.5 115 70.4
BcaB02g11256 Brassica carinata HOM05D003731 ORTHO05D004429 3.5e-38 162.2 109 73.4
AUR62001353 Chenopodium quinoa HOM05D003731 ORTHO05D004429 3.5e-38 162.2 108 72.2
AUR62025651 Chenopodium quinoa HOM05D003731 ORTHO05D004429 7.8e-38 161.0 108 72.2
Zm00001eb232310 Zea mays HOM05D003731 ORTHO05D004429 7.8e-38 161.0 112 73.2
Ciclev10025825m.g Citrus clementina HOM05D003731 ORTHO05D004429 6.6e-37 157.9 109 71.6
Sabra10G0196300 Salix brachista HOM05D003731 ORTHO05D004429 6.6e-37 157.9 148 59.5
Aa31LG8G7840 Aethionema arabicum HOM05D003731 ORTHO05D004429 1.1e-36 157.1 119 63.9
Oeu049642.2 Olea europaea HOM05D003731 ORTHO05D004429 1.1e-36 157.1 111 70.3
Thecc.06G059900 Theobroma cacao HOM05D003731 ORTHO05D004429 1.1e-36 157.1 109 77.1
unitig_32.g11007 Utricularia gibba HOM05D003731 ORTHO05D004429 2.5e-36 156.0 111 70.3
Duzib192G0075 Durio zibethinus HOM05D003731 ORTHO05D004429 5.6e-36 154.8 116 71.6
ECA234G1217 Erigeron canadensis HOM05D003731 ORTHO05D004429 9.6e-36 154.1 109 67.9
Lsat_1_v5_gn_5_137321 Lactuca sativa HOM05D003731 ORTHO05D004429 3.6e-35 152.1 109 68.8
HanXRQChr10g0311171 Helianthus annuus HOM05D003731 ORTHO05D004429 4.7e-35 151.8 109 67.0
Lsat_1_v5_gn_8_80840 Lactuca sativa HOM05D003731 ORTHO05D004429 1.4e-34 150.2 109 67.9
ClCG09G001660 Citrullus lanatus HOM05D003731 ORTHO05D004429 4.0e-34 148.7 109 70.6
Mapoly0153s0003 Marchantia polymorpha HOM05D003731 ORTHO05D004429 4.0e-34 148.7 118 62.7
AagrBONN_evm.TU.Sc2ySwM_228.2381 Anthoceros agrestis HOM05D003731 ORTHO05D004429 1.5e-33 146.7 109 64.2
SMO364G0508 Selaginella moellendorffii HOM05D003731 ORTHO05D004429 1.5e-33 146.7 111 66.7
Pp3c19_5780 Physcomitrium patens HOM05D003731 ORTHO05D004429 5.8e-33 144.8 132 55.3
Cpa.g.sc461.2 Carica papaya HOM05D003731 ORTHO05D004429 3.8e-32 142.1 84 82.1
BcaB04g20609 Brassica carinata HOM05D003731 ORTHO05D004429 1.9e-31 139.8 111 64.9
Carub.0003s2104 Capsella rubella HOM05D003731 ORTHO05D004429 2.1e-30 136.3 81 80.2
Pp3c18_21250 Physcomitrium patens HOM05D003731 ORTHO05D004429 2.1e-30 136.3 132 53.0
Gohir.A02G090300 Gossypium hirsutum HOM05D003731 ORTHO05D004429 3.5e-30 135.6 84 77.4
Sc12g0011120 Simmondsia chinensis HOM05D003731 ORTHO05D004429 4.6e-30 135.2 79 79.7
BcaC08g44499 Brassica carinata HOM05D003731 ORTHO05D004429 6.6e-29 131.3 77 79.2
C06p19510 Brassica napus HOM05D003731 ORTHO05D004429 6.6e-29 131.3 77 79.2
BcaNung05301 Brassica carinata HOM05D003731 ORTHO05D004429 1.6e-27 126.7 106 64.2
SEGI_29649 Sequoiadendron giganteum HOM05D003731 ORTHO05D004429 6.2e-27 124.8 115 58.3
BraA02t08409Z Brassica rapa HOM05D003731 ORTHO05D004429 1.4e-26 123.6 77 75.3
Hund18606 Selenicereus undatus HOM05D003731 ORTHO05D004429 5.3e-26 121.7 111 62.2
Ah.15g094360 Amaranthus hybridus HOM05D003731 ORTHO05D004429 2.2e-24 116.3 131 51.1
CBR_g66806 Chara braunii HOM05D003731 ORTHO05D004429 1.1e-23 114.0 111 53.2
arahy.Tifrunner.gnm1.ann1.7JFF3X Arachis hypogaea HOM05D003731 ORTHO05D004429 9.3e-23 110.9 119 55.5
HPP92_015382 Vanilla planifolia HOM05D003731 ORTHO05D004429 2.7e-22 109.4 77 72.7
CARHR113330 Cardamine hirsuta HOM05D003731 ORTHO05D004429 4.6e-14 82.0 63 66.7
PRCOL_00002787 Prasinoderma coloniale HOM05D003731 ORTHO05D004429 1.5e-12 77.0 117 35.0
MCO09G402 Micromonas commoda HOM05D003731 ORTHO05D004429 3.3e-12 75.9 131 35.9
Cre12.g520200 Chlamydomonas reinhardtii HOM05D003731 ORTHO05D004429 3.7e-11 72.4 90 38.9
HPP92_028546 Vanilla planifolia HOM05D003731 ORTHO05D004429 6.2e-11 71.6 61 55.7
SEGI_01865 Sequoiadendron giganteum HOM05D003472 ORTHO05D004200 5.8e-09 65.1 49 77.6
MCO13G417 Micromonas commoda HOM05D003731 ORTHO05D004429 4.2e-07 58.9 122 32.8
SEGI_34465 Sequoiadendron giganteum HOM05D038634 ORTHO05D002635 5.5e-07 58.5 47 74.5
Carub.0043s0002 Capsella rubella HOM05D003731 ORTHO05D004429 3.5e-06 55.8 66 53.0


User provided reference genes

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