Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14166 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 0.0e+00 1457.2 714 100.0
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 6.9e-91 339.3 618 36.1
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 2.0e-90 337.8 607 34.3
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 8.5e-89 332.4 617 36.0
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 2.1e-87 327.8 595 36.0
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 1.0e-86 325.5 591 36.2
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 3.0e-86 323.9 615 34.8
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 3.9e-86 323.6 615 35.3
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 1.3e-81 308.5 605 33.2
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 2.9e-81 307.4 595 34.5
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 6.5e-81 306.2 619 33.6
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 1.9e-80 304.7 559 35.8
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.2e-80 303.5 602 34.6
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.2e-80 303.5 597 34.8
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 5.5e-80 303.1 601 33.4
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 2.7e-79 300.8 583 32.9
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 1.1e-77 295.4 636 32.1
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 3.7e-76 290.4 614 32.1
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 6.3e-76 289.7 589 32.3
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 8.2e-76 289.3 582 34.0
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.1e-75 288.9 589 32.3
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 5.3e-75 286.6 472 37.5
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 9.1e-75 285.8 598 32.3
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 9.1e-75 285.8 576 33.5
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 9.1e-75 285.8 522 33.9
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 3.5e-74 283.9 416 39.4
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 7.7e-74 282.7 404 39.4
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.3e-73 282.0 639 33.0
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 2.2e-73 281.2 490 34.1
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 2.9e-73 280.8 589 34.1
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 6.5e-73 279.6 588 31.6
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 8.5e-73 279.3 618 32.0
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 1.5e-72 278.5 630 31.4
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 2.5e-72 277.7 517 33.3
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 3.2e-72 277.3 597 30.8
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 5.5e-72 276.6 594 30.8
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 5.5e-72 276.6 380 38.2
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 7.2e-72 276.2 380 38.7
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 2.1e-71 274.6 526 33.5
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 4.7e-71 273.5 414 37.2
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 6.1e-71 273.1 414 37.4
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 6.1e-71 273.1 512 33.4
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 8.0e-71 272.7 380 37.6
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.4e-70 271.9 593 33.1
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 1.4e-70 271.9 520 35.2
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 2.3e-70 271.2 381 38.6
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 3.0e-70 270.8 537 35.2
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 3.0e-70 270.8 595 31.4
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 4.0e-70 270.4 627 32.2
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 4.0e-70 270.4 590 30.5
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 8.8e-70 269.2 604 32.8
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.2e-69 268.9 579 31.1
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 2.0e-69 268.1 380 36.8
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 4.4e-69 266.9 580 32.1
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 7.5e-69 266.2 496 32.9
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.3e-68 265.4 622 31.2
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 1.3e-68 265.4 587 30.8
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 1.7e-68 265.0 579 32.3
Cpa.g.sc55.178 Carica papaya HOM05D006144 ORTHO05D006357 2.2e-68 264.6 587 31.7
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 2.2e-68 264.6 604 31.5
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 2.8e-68 264.2 593 30.5
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 2.8e-68 264.2 607 31.1
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 2.8e-68 264.2 612 32.4
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.7e-68 263.8 504 34.9
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 6.3e-68 263.1 567 31.6
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 8.3e-68 262.7 483 34.2
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 1.1e-67 262.3 500 33.0
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 3.1e-67 260.8 595 31.6
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 5.4e-67 260.0 397 34.0
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 9.1e-67 259.2 394 35.8
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 2.0e-66 258.1 501 31.9
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 6.5e-65 253.1 615 30.4
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 1.5e-64 251.9 420 34.5
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 5.5e-64 250.0 584 30.5
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 1.6e-63 248.4 605 30.2
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 1.6e-63 248.4 572 30.6
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 8.0e-63 246.1 617 31.3
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 8.8e-62 242.7 503 31.8
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 3.4e-61 240.7 380 35.8
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 5.7e-61 240.0 502 31.9
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 7.5e-61 239.6 407 36.6
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 7.5e-61 239.6 435 35.4
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.7e-60 238.4 430 32.6
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 2.8e-60 237.7 624 30.8
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 8.3e-60 236.1 399 32.3
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 3.5e-58 230.7 408 31.9
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 7.7e-58 229.6 481 30.8
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 8.6e-57 226.1 382 33.0
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 1.2e-55 222.2 629 27.3
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 2.3e-54 218.0 385 35.1
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 7.5e-53 213.0 570 28.2
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 4.9e-52 210.3 466 31.1
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 4.1e-51 207.2 436 30.0
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 1.3e-49 202.2 445 32.1
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 1.6e-47 195.3 569 29.5
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 5.8e-45 186.8 478 31.0
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 5.8e-45 186.8 349 29.8
Pp3c4_25960 Physcomitrium patens HOM05D006144 ORTHO05D006357 2.3e-38 164.9 606 26.4
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 1.6e-34 152.1 388 30.4
Pp3c26_5160 Physcomitrium patens HOM05D006144 ORTHO05D006357 1.5e-32 145.6 582 24.4
CBR_g31222 Chara braunii HOM05D006144 ORTHO05D006357 2.4e-22 111.7 395 24.3
unitig_736.g22373 Utricularia gibba HOM05D006144 ORTHO05D006357 5.2e-22 110.5 255 29.0
MCO09G582 Micromonas commoda HOM05D006144 ORTHO05D006357 1.6e-15 89.0 347 24.5
unitig_736.g22374 Utricularia gibba HOM05D006144 ORTHO05D006357 1.0e-09 69.7 85 41.2


User provided reference genes

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