Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14104 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 9.0e-47 189.9 94 100.0
SEGI_22253 Sequoiadendron giganteum HOM05D005301 ORTHO05D006433 1.6e-40 169.1 83 98.8
CDE02G1357 Ceratophyllum demersum HOM05D005301 ORTHO05D006433 1.4e-20 102.8 52 82.7
MD06G1157400 Malus domestica HOM05D005301 ORTHO05D006433 1.9e-20 102.4 52 84.6
Prupe.5G157400 Prunus persica HOM05D005301 ORTHO05D006433 1.9e-20 102.4 52 84.6
Aa31LG3G5920 Aethionema arabicum HOM05D005301 ORTHO05D006433 3.2e-20 101.7 52 84.6
MD14G1164000 Malus domestica HOM05D005301 ORTHO05D006433 3.2e-20 101.7 52 82.7
Phvul.009G169100 Phaseolus vulgaris HOM05D005301 ORTHO05D006433 3.2e-20 101.7 52 84.6
Sp6g12390 Schrenkiella parvula HOM05D005301 ORTHO05D006433 3.2e-20 101.7 52 84.6
THA.LOC104825004 Tarenaya hassleriana HOM05D005301 ORTHO05D006433 5.5e-20 100.9 52 84.6
Atru.chr9.1005 Acer truncatum HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Aqoxy5G03589 Aquilegia oxysepala HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
CANSAT80G2324 Cannabis sativa HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Cpa.g.sc52.37 Carica papaya HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
CiPaw.11G012400 Carya illinoinensis HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Ciclev10019136m.g Citrus clementina HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Haze_07279 Corylus avellana HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
CsaV3_1G000790 Cucumis sativus L. HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Duzib205G0739 Durio zibethinus HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
FvH4_5g07300 Fragaria vesca HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
FAN04G2720 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
FAN08G2537 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
FAN13G0064 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
FAN18G2536 Fragaria x ananassa HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Gohir.A12G188000 Gossypium hirsutum HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Gohir.D12G190800 Gossypium hirsutum HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Gorai.008G204700 Gossypium raimondii HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Nn4g22465 Nelumbo nucifera HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 84.6
RcHm_v2.0_Chr7g0191331 Rosa chinensis HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Sabra15G0112300 Salix brachista HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Thecc.03G122400 Theobroma cacao HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
TAR374G1436 Trochodendron aralioides HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
GSVIVG01007548001 Vitis vinifera HOM05D005301 ORTHO05D006433 7.1e-20 100.5 52 82.7
Eucgr.B00154 Eucalyptus grandis HOM05D005301 ORTHO05D006433 9.3e-20 100.1 54 79.6
Glyma.04G192600 Glycine max HOM05D005301 ORTHO05D006433 9.3e-20 100.1 52 82.7
Glyma.06G173200 Glycine max HOM05D005301 ORTHO05D006433 9.3e-20 100.1 52 82.7
PSO063G0990 Papaver somniferum HOM05D005301 ORTHO05D006433 9.3e-20 100.1 52 82.7
PSO782G4848 Papaver somniferum HOM05D005301 ORTHO05D006433 9.3e-20 100.1 52 82.7
PGR083G1269 Punica granatum HOM05D005301 ORTHO05D006433 9.3e-20 100.1 52 86.5
AagrBONN_evm.TU.Sc2ySwM_344.1825 Anthoceros agrestis HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
AL8G24360 Arabidopsis lyrata HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
AT5G50310 Arabidopsis thaliana HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
BcaB01g02903 Brassica carinata HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
BcaC01g04820 Brassica carinata HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
A03p27760 Brassica napus HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
C03p33480 Brassica napus HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
BolC3t15670H Brassica oleracea HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
BraA03t11987Z Brassica rapa HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
CARHR258240 Cardamine hirsuta HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
ClCG06G017670 Citrullus lanatus HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 80.8
Thhalv10012907m.g Eutrema salsugineum HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 82.7
QL10p005311 Quercus lobata HOM05D005301 ORTHO05D006433 1.2e-19 99.8 52 80.8
EL10Ac7g18070 Beta vulgaris HOM05D005301 ORTHO05D006433 1.6e-19 99.4 52 80.8
Lj1g0016804 Lotus japonicus HOM05D005301 ORTHO05D006433 1.6e-19 99.4 52 80.8
Manes.06G114900 Manihot esculenta HOM05D005301 ORTHO05D006433 1.6e-19 99.4 52 80.8
SGA_v2.0_scaffold102G29851 Striga asiatica HOM05D005301 ORTHO05D006433 1.6e-19 99.4 52 84.6
Actinidia16194 Actinidia chinensis HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
Cfa018895 Carpinus fangiana HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
Cc04_g10470 Coffea canephora HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
Migut.I00257 Erythranthe guttata HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
Lalb_Chr11g0069731 Lupinus albus HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 80.8
MBI06_g16660_MAGBIO Magnolia biondii HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 80.8
Os04g0483600 Oryza sativa ssp. japonica HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
SalBow4G2023 Salvia bowleyana HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
SMO339G0058 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 80.8
TWI39G1189 Tripterygium wilfordii HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 80.8
Zm00001eb079290 Zea mays HOM05D005301 ORTHO05D006433 2.1e-19 99.0 52 82.7
Carub.0008s1035 Capsella rubella HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Dinv11108 Davidia involucrata HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Eucgr.B00150 Eucalyptus grandis HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Eucgr.L01339 Eucalyptus grandis HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Medtr1g107265 Medicago truncatula HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Nitab4.5_0003282g0130 Nicotiana tabacum HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Psat6g217880 Pisum sativum HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Potri.015G090100 Populus trichocarpa HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Sed0013046 Sechium edule HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 78.8
Solyc03g111390.4 Solanum lycopersicum HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
Sopen03g030520 Solanum pennellii HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
HPP92_004584 Vanilla planifolia HOM05D005301 ORTHO05D006433 2.7e-19 98.6 52 80.8
arahy.Tifrunner.gnm1.ann1.11HRG0 Arachis hypogaea HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
CAN.G352.5 Capsicum annuum HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
ECA232G2312 Erigeron canadensis HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
HanXRQChr09g0272861 Helianthus annuus HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
Lsat_1_v5_gn_4_78900 Lactuca sativa HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
Nitab4.5_0010042g0030 Nicotiana tabacum HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
Peaxi162Scf00089g00721 Petunia axillaris HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
PGSC0003DMG400015238 Solanum tuberosum HOM05D005301 ORTHO05D006433 3.5e-19 98.2 52 80.8
ATR0824G115 Amborella trichopoda HOM05D004726 ORTHO05D005986 6.0e-19 97.4 52 76.9
QL04p021669 Quercus lobata HOM05D005301 ORTHO05D006433 6.0e-19 97.4 52 78.8
Oeu011576.1 Olea europaea HOM05D005301 ORTHO05D006433 7.9e-19 97.1 52 78.8
Sc22g0004050 Simmondsia chinensis HOM05D005301 ORTHO05D006433 7.9e-19 97.1 52 78.8
vmacro19243 Vaccinium macrocarpon HOM05D005301 ORTHO05D006433 7.9e-19 97.1 61 70.5
Hund05643 Selenicereus undatus HOM05D005301 ORTHO05D006433 1.8e-18 95.9 50 80.0
Pp3c16_5780 Physcomitrium patens HOM05D005301 ORTHO05D006433 3.9e-18 94.7 52 76.9
Mapoly0001s0540 Marchantia polymorpha HOM05D005301 ORTHO05D006433 1.5e-17 92.8 52 75.0
CBR_g40809 Chara braunii HOM05D005301 ORTHO05D006433 3.3e-17 91.7 52 75.0
SMO200G0165 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 8.2e-16 87.0 51 70.6
arahy.Tifrunner.gnm1.ann1.86E75A Arachis hypogaea HOM05D005301 ORTHO05D006433 1.1e-15 86.7 45 84.4
AUR62001274 Chenopodium quinoa HOM05D005301 ORTHO05D006433 1.1e-15 86.7 74 56.8
SMO200G0119 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 1.4e-12 76.3 49 73.5
BcaC01g04819 Brassica carinata HOM05D005301 ORTHO05D006433 5.5e-12 74.3 40 77.5
SMO089G0014 Selaginella moellendorffii HOM05D005301 ORTHO05D006433 4.6e-11 71.2 56 60.7
Cre09.g398200 Chlamydomonas reinhardtii HOM05D005301 ORTHO05D006433 7.9e-11 70.5 54 59.3
PRCOL_00006105 Prasinoderma coloniale HOM05D005301 ORTHO05D006433 1.8e-10 69.3 52 50.0
AUR62025732 Chenopodium quinoa HOM05D005301 ORTHO05D006433 3.1e-07 58.5 31 77.4
Lj9A475G63 Lonicera japonica HOM05D005301 ORTHO05D006433 5.3e-07 57.8 31 77.4
MCO16G658 Micromonas commoda HOM05D005301 ORTHO05D006433 5.3e-07 57.8 54 48.1
CSS0020432 Camellia sinensis var. sinensis HOM05D005301 ORTHO05D006433 4.5e-06 54.7 29 79.3


User provided reference genes

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