Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_14035 Sequoiadendron giganteum HOM05D003414 ORTHO05D003913 1.7e-145 519.2 253 100.0
Aqoxy3G02886 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 1.2e-18 97.8 73 65.8
Atru.chr11.2070 Acer truncatum HOM05D003414 ORTHO05D003913 1.6e-18 97.4 59 78.0
Sc12g0005240 Simmondsia chinensis HOM05D003414 ORTHO05D003913 2.1e-18 97.1 62 72.6
Migut.L01464 Erythranthe guttata HOM05D003414 ORTHO05D003913 4.7e-18 95.9 59 72.9
MBI10_g27995_MAGBIO Magnolia biondii HOM05D003414 ORTHO05D003913 4.7e-18 95.9 72 66.7
Manes.12G026100 Manihot esculenta HOM05D003414 ORTHO05D003913 8.1e-18 95.1 59 74.6
ATR0763G280 Amborella trichopoda HOM05D003414 ORTHO05D003913 1.1e-17 94.7 59 76.3
Haze_12213 Corylus avellana HOM05D003414 ORTHO05D003913 1.1e-17 94.7 57 77.2
FAN21G2683 Fragaria x ananassa HOM05D003414 ORTHO05D003913 1.1e-17 94.7 56 82.1
Sabra02G0017100 Salix brachista HOM05D000201 ORTHO05D000490 1.4e-17 94.4 59 76.3
TWI18G0866 Tripterygium wilfordii HOM05D003414 ORTHO05D003913 1.4e-17 94.4 58 77.6
ATR0199G007 Amborella trichopoda HOM05D003414 ORTHO05D003913 1.8e-17 94.0 59 76.3
Eucgr.H02550 Eucalyptus grandis HOM05D003414 ORTHO05D003913 1.8e-17 94.0 71 64.8
AL6G15560 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 2.4e-17 93.6 58 75.9
BraA03t09601Z Brassica rapa HOM05D003414 ORTHO05D003913 2.4e-17 93.6 58 75.9
Thhalv10022817m.g Eutrema salsugineum HOM05D003414 ORTHO05D003913 2.4e-17 93.6 58 75.9
FAN11G3592 Fragaria x ananassa HOM05D003414 ORTHO05D003913 2.4e-17 93.6 56 80.4
A03p02400 Brassica napus HOM05D000093 ORTHO05D003913 3.1e-17 93.2 58 74.1
CiPaw.05G186600 Carya illinoinensis HOM05D003414 ORTHO05D003913 3.1e-17 93.2 59 72.9
DCAR_001175 Daucus carota HOM05D003414 ORTHO05D003913 3.1e-17 93.2 59 72.9
DCAR_010112 Daucus carota HOM05D003414 ORTHO05D003913 3.1e-17 93.2 59 72.9
Thhalv10014432m.g Eutrema salsugineum HOM05D003414 ORTHO05D003913 3.1e-17 93.2 73 63.0
Oeu056411.1 Olea europaea HOM05D003414 ORTHO05D003913 3.1e-17 93.2 62 69.4
Actinidia13495 Actinidia chinensis HOM05D003414 ORTHO05D003913 4.0e-17 92.8 66 68.2
Potri.002G020900 Populus trichocarpa HOM05D003414 ORTHO05D003913 4.0e-17 92.8 58 75.9
QL03p059258 Quercus lobata HOM05D003414 ORTHO05D003913 4.0e-17 92.8 58 75.9
TAR371G0246 Trochodendron aralioides HOM05D003414 ORTHO05D003913 4.0e-17 92.8 71 66.2
AT5G05670 Arabidopsis thaliana HOM05D003414 ORTHO05D003913 5.2e-17 92.4 58 74.1
BcaB01g05755 Brassica carinata HOM05D003414 ORTHO05D003913 5.2e-17 92.4 73 63.0
BcaB01g05959 Brassica carinata HOM05D003414 ORTHO05D003913 5.2e-17 92.4 73 63.0
C03p02730 Brassica napus HOM05D003414 ORTHO05D003913 5.2e-17 92.4 73 63.0
BolC3t12827H Brassica oleracea HOM05D003414 ORTHO05D003913 5.2e-17 92.4 73 63.0
PSO063G3439 Papaver somniferum HOM05D003414 ORTHO05D003913 5.2e-17 92.4 59 72.9
Psat7g182200 Pisum sativum HOM05D003414 ORTHO05D003913 5.2e-17 92.4 59 69.5
Prupe.5G031200 Prunus persica HOM05D003414 ORTHO05D003913 5.2e-17 92.4 58 75.9
Aqoxy6G00029 Aquilegia oxysepala HOM05D003414 ORTHO05D003913 6.8e-17 92.0 66 69.7
CARHR207610 Cardamine hirsuta HOM05D003414 ORTHO05D003913 6.8e-17 92.0 57 75.4
Medtr5g033930 Medicago truncatula HOM05D003414 ORTHO05D003913 6.8e-17 92.0 59 69.5
Nn3g18717 Nelumbo nucifera HOM05D003414 ORTHO05D003913 6.8e-17 92.0 70 65.7
PSO832G1583 Papaver somniferum HOM05D003414 ORTHO05D003913 6.8e-17 92.0 59 72.9
SalBow8G5473 Salvia bowleyana HOM05D003414 ORTHO05D003913 6.8e-17 92.0 59 69.5
THA.LOC104807784 Tarenaya hassleriana HOM05D003414 ORTHO05D003913 6.8e-17 92.0 58 74.1
unitig_22.g6429 Utricularia gibba HOM05D003414 ORTHO05D003913 6.8e-17 92.0 59 72.9
EL10Ac5g10731 Beta vulgaris HOM05D003414 ORTHO05D003913 8.9e-17 91.7 59 69.5
FAN07G0063 Fragaria x ananassa HOM05D003414 ORTHO05D003913 8.9e-17 91.7 56 80.4
CANSAT01G0332 Cannabis sativa HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 74.1
Ca_03139_v3 Cicer arietinum L. HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 69.0
Hma1.2p1_0160F.1_g071100 Hydrangea macrophylla HOM05D003414 ORTHO05D003913 1.2e-16 91.3 59 72.9
Lj2A165T38 Lonicera japonica HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 74.1
MD10G1002700 Malus domestica HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 75.9
Prupe.4G272800 Prunus persica HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 74.1
THA.LOC104824779 Tarenaya hassleriana HOM05D003414 ORTHO05D003913 1.2e-16 91.3 58 74.1
Carub.0006s0456 Capsella rubella HOM05D003414 ORTHO05D003913 1.5e-16 90.9 58 72.4
MD06G1037800 Malus domestica HOM05D003414 ORTHO05D003913 1.5e-16 90.9 58 74.1
Hund09448 Selenicereus undatus HOM05D003414 ORTHO05D003913 1.5e-16 90.9 62 67.7
Sopen11g019580 Solanum pennellii HOM05D003414 ORTHO05D003913 1.5e-16 90.9 59 69.5
Aa31LG8G15890 Aethionema arabicum HOM05D003414 ORTHO05D003913 2.0e-16 90.5 58 70.7
BraA07t27987Z Brassica rapa HOM05D003414 ORTHO05D003913 2.0e-16 90.5 61 68.9
AUR62031250 Chenopodium quinoa HOM05D003414 ORTHO05D003913 2.0e-16 90.5 62 67.7
FvH4_3g28340 Fragaria vesca HOM05D003414 ORTHO05D003913 2.0e-16 90.5 56 78.6
Nitab4.5_0000570g0070 Nicotiana tabacum HOM05D003414 ORTHO05D003913 2.0e-16 90.5 59 71.2
Solyc11g043150.2 Solanum lycopersicum HOM05D003414 ORTHO05D003913 2.0e-16 90.5 59 69.5
CDE07G0297 Ceratophyllum demersum HOM05D003414 ORTHO05D003913 2.6e-16 90.1 56 75.0
MELO3C011981.2 Cucumis melo HOM05D003414 ORTHO05D003913 2.6e-16 90.1 73 61.6
Lalb_Chr09g0326281 Lupinus albus HOM05D003414 ORTHO05D003913 2.6e-16 90.1 57 71.9
Medtr4g071550 Medicago truncatula HOM05D003414 ORTHO05D003913 2.6e-16 90.1 58 69.0
Phvul.002G064800 Phaseolus vulgaris HOM05D003414 ORTHO05D003913 2.6e-16 90.1 58 65.5
RcHm_v2.0_Chr7g0219271 Rosa chinensis HOM05D003414 ORTHO05D003913 2.6e-16 90.1 56 76.8
AagrBONN_evm.TU.Sc2ySwM_344.3880 Anthoceros agrestis HOM05D003414 ORTHO05D003913 3.4e-16 89.7 53 75.5
AagrBONN_evm.TU.Sc2ySwM_344.3882 Anthoceros agrestis HOM05D003414 ORTHO05D003913 3.4e-16 89.7 53 75.5
MSTRG.13359 Avicennia marina HOM05D003414 ORTHO05D003913 3.4e-16 89.7 58 72.4
Cfa009179 Carpinus fangiana HOM05D003414 ORTHO05D003913 3.4e-16 89.7 57 73.7
Sp3g32260 Schrenkiella parvula HOM05D003414 ORTHO05D003913 3.4e-16 89.7 58 72.4
BcaB03g16667 Brassica carinata HOM05D003414 ORTHO05D003913 4.4e-16 89.4 76 56.6
A07p01870 Brassica napus HOM05D001097 ORTHO05D001009 4.4e-16 89.4 61 68.9
AUR62027450 Chenopodium quinoa HOM05D003414 ORTHO05D003913 4.4e-16 89.4 62 67.7
ClCG05G025490 Citrullus lanatus HOM05D003414 ORTHO05D003913 4.4e-16 89.4 73 61.6
CsaV3_5G031410 Cucumis sativus L. HOM05D003414 ORTHO05D003913 4.4e-16 89.4 57 71.9
Rhsim12G0043300 Rhododendron simsii HOM05D003414 ORTHO05D003913 4.4e-16 89.4 59 69.5
BcaC06g36459 Brassica carinata HOM05D003414 ORTHO05D003913 5.8e-16 89.0 61 67.2
A10p30690 Brassica napus HOM05D003414 ORTHO05D003913 5.8e-16 89.0 58 70.7
C07p04000 Brassica napus HOM05D001097 ORTHO05D001009 5.8e-16 89.0 61 67.2
BolC7t40789H Brassica oleracea HOM05D003414 ORTHO05D003913 5.8e-16 89.0 61 67.2
FvH4_4g10641 Fragaria vesca HOM05D003414 ORTHO05D003913 5.8e-16 89.0 56 78.6
FAN12G1958 Fragaria x ananassa HOM05D003414 ORTHO05D003913 5.8e-16 89.0 56 78.6
FAN22G0068 Fragaria x ananassa HOM05D003414 ORTHO05D003913 5.8e-16 89.0 70 68.6
Pp3c4_20930 Physcomitrium patens HOM05D003414 ORTHO05D003913 5.8e-16 89.0 56 69.6
Carub.0003s3304 Capsella rubella HOM05D003414 ORTHO05D003913 7.6e-16 88.6 58 70.7
COL.COLO4_16919 Corchorus olitorius HOM05D003414 ORTHO05D003913 7.6e-16 88.6 58 72.4
Duzib084G0257 Durio zibethinus HOM05D003414 ORTHO05D003913 7.6e-16 88.6 71 63.4
Duzib205G0939 Durio zibethinus HOM05D003414 ORTHO05D003913 7.6e-16 88.6 71 64.8
Glyma.08G284800 Glycine max HOM05D003414 ORTHO05D003913 7.6e-16 88.6 63 69.8
SGA_v2.0_scaffold63G21706 Striga asiatica HOM05D003414 ORTHO05D003913 7.6e-16 88.6 59 64.4
TPR.G16233 Trifolium pratense HOM05D003414 ORTHO05D003913 7.6e-16 88.6 59 66.1
HPP92_024705 Vanilla planifolia HOM05D003414 ORTHO05D003913 7.6e-16 88.6 59 67.8
VMungo1215G2070 Vigna mungo HOM05D003414 ORTHO05D003913 7.6e-16 88.6 58 63.8
BraA10t45110Z Brassica rapa HOM05D003414 ORTHO05D003913 9.9e-16 88.2 57 71.9
Cc01_g10380 Coffea canephora HOM05D003414 ORTHO05D003913 9.9e-16 88.2 59 67.8
Dinv17534 Davidia involucrata HOM05D003414 ORTHO05D003913 9.9e-16 88.2 58 72.4
ECA232G2835 Erigeron canadensis HOM05D003414 ORTHO05D003913 9.9e-16 88.2 59 71.2
HanXRQChr13g0415431 Helianthus annuus HOM05D003414 ORTHO05D003913 9.9e-16 88.2 59 71.2
Nitab4.5_0004438g0070 Nicotiana tabacum HOM05D003414 ORTHO05D003913 9.9e-16 88.2 59 69.5
Peaxi162Scf00086g00329 Petunia axillaris HOM05D003414 ORTHO05D003913 9.9e-16 88.2 59 67.8
PGR119G0039 Punica granatum HOM05D003414 ORTHO05D003913 9.9e-16 88.2 58 70.7
AT2G18770 Arabidopsis thaliana HOM05D003414 ORTHO05D003913 1.3e-15 87.8 58 70.7
CAN.G546.30 Capsicum annuum HOM05D003414 ORTHO05D003913 1.3e-15 87.8 59 67.8
Glyma.02G036200 Glycine max HOM05D003414 ORTHO05D003913 1.3e-15 87.8 58 67.2
Gohir.A08G153100 Gossypium hirsutum HOM05D003414 ORTHO05D003913 1.3e-15 87.8 58 72.4
Gorai.004G181700 Gossypium raimondii HOM05D003414 ORTHO05D003913 1.3e-15 87.8 58 72.4
Lj2g0023712 Lotus japonicus HOM05D003414 ORTHO05D003913 1.3e-15 87.8 58 65.5
RcHm_v2.0_Chr2g0115401 Rosa chinensis HOM05D003414 ORTHO05D003913 1.3e-15 87.8 56 75.0
Sp6g37220 Schrenkiella parvula HOM05D003414 ORTHO05D003913 1.3e-15 87.8 57 71.9
Hund02753 Selenicereus undatus HOM05D003414 ORTHO05D003913 1.3e-15 87.8 62 66.1
PGSC0003DMG400000451 Solanum tuberosum HOM05D003414 ORTHO05D003913 1.3e-15 87.8 59 67.8
arahy.Tifrunner.gnm1.ann1.27SX2S Arachis hypogaea HOM05D003414 ORTHO05D003913 1.7e-15 87.4 58 69.0
arahy.Tifrunner.gnm1.ann1.566SHA Arachis hypogaea HOM05D003414 ORTHO05D003913 1.7e-15 87.4 58 69.0
CSS0045981 Camellia sinensis var. sinensis HOM05D003414 ORTHO05D003913 1.7e-15 87.4 59 69.5
CDE06G2515 Ceratophyllum demersum HOM05D003414 ORTHO05D003913 1.7e-15 87.4 51 80.4
Ciclev10032463m.g Citrus clementina HOM05D003414 ORTHO05D003913 1.7e-15 87.4 50 80.0
Nitab4.5_0000329g0140 Nicotiana tabacum HOM05D003414 ORTHO05D003913 1.7e-15 87.4 59 67.8
vmacro01152 Vaccinium macrocarpon HOM05D003414 ORTHO05D003913 1.7e-15 87.4 59 66.1
Actinidia08151 Actinidia chinensis HOM05D003414 ORTHO05D003913 2.2e-15 87.0 59 69.5
arahy.Tifrunner.gnm1.ann1.1EZN5T Arachis hypogaea HOM05D003414 ORTHO05D003913 2.2e-15 87.0 58 67.2
BolC9t59879H Brassica oleracea HOM05D003414 ORTHO05D003913 2.2e-15 87.0 58 69.0
Gohir.A03G000026 Gossypium hirsutum HOM05D003414 ORTHO05D003913 2.2e-15 87.0 75 60.0
Lalb_Chr16g0382141 Lupinus albus HOM05D003414 ORTHO05D003913 2.2e-15 87.0 57 70.2
AL3G53170 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 2.9e-15 86.7 58 69.0
CARHR109370 Cardamine hirsuta HOM05D003414 ORTHO05D003913 2.9e-15 86.7 58 69.0
Glyma.01G029000 Glycine max HOM05D003414 ORTHO05D003913 2.9e-15 86.7 58 63.8
Peaxi162Scf00086g00133 Petunia axillaris HOM05D003414 ORTHO05D003913 2.9e-15 86.7 59 66.1
GSVIVG01013784001 Vitis vinifera HOM05D003414 ORTHO05D003913 2.9e-15 86.7 58 69.0
BcaC06g32272 Brassica carinata HOM05D003414 ORTHO05D003913 4.9e-15 85.9 57 70.2
C09p71170 Brassica napus HOM05D003414 ORTHO05D003913 4.9e-15 85.9 57 70.2
Oeu059926.1 Olea europaea HOM05D003414 ORTHO05D003913 6.4e-15 85.5 71 57.7
Sed0009810 Sechium edule HOM05D003414 ORTHO05D003913 6.4e-15 85.5 57 71.9
Sed0017421 Sechium edule HOM05D003414 ORTHO05D003913 6.4e-15 85.5 57 70.2
TAR629G3074 Trochodendron aralioides HOM05D003414 ORTHO05D003913 6.4e-15 85.5 59 66.1
Nitab4.5_0001819g0040 Nicotiana tabacum HOM05D003414 ORTHO05D003913 8.4e-15 85.1 59 66.1
Solyc03g112450.4 Solanum lycopersicum HOM05D003414 ORTHO05D003913 8.4e-15 85.1 59 66.1
Sopen03g031530 Solanum pennellii HOM05D003414 ORTHO05D003913 8.4e-15 85.1 59 66.1
HPP92_005090 Vanilla planifolia HOM05D003414 ORTHO05D003913 8.4e-15 85.1 59 64.4
Gorai.003G186100 Gossypium raimondii HOM05D003414 ORTHO05D003913 1.1e-14 84.7 61 63.9
Lsat_1_v5_gn_6_83720 Lactuca sativa HOM05D003414 ORTHO05D003913 1.1e-14 84.7 59 69.5
RcHm_v2.0_Chr4g0406261 Rosa chinensis HOM05D003414 ORTHO05D003913 1.1e-14 84.7 56 75.0
Thecc.03G311500 Theobroma cacao HOM05D003414 ORTHO05D003913 1.4e-14 84.3 70 64.3
Os08g0524000 Oryza sativa ssp. japonica HOM05D003414 ORTHO05D003913 1.9e-14 84.0 58 67.2
Gohir.D08G174000 Gossypium hirsutum HOM05D003414 ORTHO05D003913 2.4e-14 83.6 54 72.2
Gohir.D03G176800 Gossypium hirsutum HOM05D003414 ORTHO05D003913 3.2e-14 83.2 71 57.7
SMO116G0362 Selaginella moellendorffii HOM05D003414 ORTHO05D003913 1.2e-13 81.3 54 70.4
Mapoly0005s0007 Marchantia polymorpha HOM05D003414 ORTHO05D003913 1.6e-13 80.9 60 68.3
Zm00001eb042120 Zea mays HOM05D003414 ORTHO05D003913 2.7e-13 80.1 55 67.3
MSTRG.7908 Avicennia marina HOM05D003414 ORTHO05D003913 3.5e-13 79.7 61 62.3
Zm00001eb178650 Zea mays HOM05D003414 ORTHO05D003913 7.8e-13 78.6 59 61.0
Dinv29446 Davidia involucrata HOM05D003414 ORTHO05D003913 1.3e-12 77.8 59 62.7
CAN.G484.27 Capsicum annuum HOM05D003414 ORTHO05D003913 2.3e-12 77.0 62 58.1
GSVIVG01007725001 Vitis vinifera HOM05D003414 ORTHO05D003913 3.0e-12 76.6 68 57.4
Lj6A808T47 Lonicera japonica HOM05D003414 ORTHO05D003913 7.3e-11 72.0 72 52.8
MD15G1134100 Malus domestica HOM05D003414 ORTHO05D003913 7.3e-11 72.0 45 77.8
PSO063G2065 Papaver somniferum HOM05D003414 ORTHO05D003913 9.6e-11 71.6 59 55.9
SalBow2G1763 Salvia bowleyana HOM05D003414 ORTHO05D003913 9.6e-11 71.6 66 54.5
RcHm_v2.0_Chr5g0051231 Rosa chinensis HOM05D003414 ORTHO05D003913 1.2e-10 71.2 44 77.3
Lsat_1_v5_gn_1_119941 Lactuca sativa HOM05D003414 ORTHO05D003913 8.1e-10 68.6 244 29.9
unitig_8.g3149 Utricularia gibba HOM05D003414 ORTHO05D003913 2.4e-09 67.0 48 64.6
CBR_g6524 Chara braunii HOM05D003414 ORTHO05D003913 5.2e-09 65.9 45 68.9
Lsat_1_v5_gn_5_52981 Lactuca sativa HOM05D003414 ORTHO05D003913 3.8e-07 59.7 59 54.2
Lsat_1_v5_gn_5_70981 Lactuca sativa HOM05D003414 ORTHO05D003913 3.8e-07 59.7 59 54.2
AL3G22240 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.4e-06 57.8 42 61.9
AL6G39020 Arabidopsis lyrata HOM05D003414 ORTHO05D003913 1.4e-06 57.8 42 61.9
Potri.009G001600 Populus trichocarpa HOM05D003414 ORTHO05D003913 2.4e-06 57.0 47 61.7
Psat2g102320 Pisum sativum HOM05D003414 ORTHO05D003913 4.2e-06 56.2 31 74.2
PGSC0003DMG400020871 Solanum tuberosum HOM05D003414 ORTHO05D003913 9.3e-06 55.1 44 56.8


User provided reference genes

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