Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.1e-243 846.3 439 100.0
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.4e-46 191.4 403 33.7
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 4.2e-46 189.9 406 34.2
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 9.3e-46 188.7 402 33.6
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 3.5e-45 186.8 404 32.2
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 4.6e-45 186.4 400 32.2
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 1.0e-44 185.3 397 32.5
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 4.3e-43 179.9 427 30.9
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 5.7e-43 179.5 399 32.1
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 9.6e-43 178.7 402 33.1
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 1.6e-42 177.9 395 33.2
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 2.1e-42 177.6 391 30.9
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 2.8e-42 177.2 406 32.5
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 3.7e-42 176.8 404 33.4
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 1.1e-41 175.3 401 32.2
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.4e-41 174.9 407 31.2
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 1.8e-41 174.5 402 33.1
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 3.1e-41 173.7 401 29.9
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 3.1e-41 173.7 400 30.8
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 5.3e-41 172.9 403 31.0
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 2.6e-40 170.6 398 29.9
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 3.4e-40 170.2 414 31.2
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 7.6e-40 169.1 420 30.0
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 1.0e-39 168.7 396 31.6
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 1.0e-39 168.7 393 33.1
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 1.7e-39 167.9 406 31.0
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 2.2e-39 167.5 416 32.2
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 3.8e-39 166.8 403 33.3
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 5.0e-39 166.4 394 30.7
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 6.5e-39 166.0 415 33.5
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 8.4e-39 165.6 396 29.8
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 1.9e-38 164.5 408 31.9
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 2.5e-38 164.1 407 31.7
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 3.2e-38 163.7 394 30.5
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 3.2e-38 163.7 400 31.5
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 4.2e-38 163.3 407 32.2
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 5.5e-38 162.9 393 29.8
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 7.2e-38 162.5 398 31.9
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.2e-37 161.8 393 31.0
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 2.1e-37 161.0 397 33.5
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 2.1e-37 161.0 404 30.0
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.1e-37 161.0 393 30.8
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 2.7e-37 160.6 420 31.2
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 4.6e-37 159.8 396 29.8
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 6.1e-37 159.5 393 30.5
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 6.1e-37 159.5 402 32.1
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 7.9e-37 159.1 396 29.3
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 1.8e-36 157.9 399 28.8
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 2.3e-36 157.5 409 30.8
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 3.9e-36 156.8 398 31.4
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 3.9e-36 156.8 449 29.6
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 8.7e-36 155.6 408 29.7
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 8.7e-36 155.6 398 30.4
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 1.9e-35 154.5 393 28.5
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 5.7e-35 152.9 401 30.9
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 7.4e-35 152.5 454 30.0
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 7.4e-35 152.5 421 29.7
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 9.7e-35 152.1 445 28.3
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 1.3e-34 151.8 389 30.8
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.6e-34 151.4 397 31.5
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 2.2e-34 151.0 412 27.9
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 6.3e-34 149.4 412 27.9
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.1e-33 148.7 431 29.9
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 1.8e-33 147.9 422 31.0
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 2.4e-33 147.5 438 29.7
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 4.1e-33 146.7 428 31.5
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 4.1e-33 146.7 406 31.3
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 1.2e-32 145.2 429 28.9
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 1.5e-32 144.8 426 28.4
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 5.9e-32 142.9 416 29.3
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 2.3e-28 131.0 384 28.9
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 6.7e-28 129.4 390 27.4
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 7.7e-24 115.9 420 26.7
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 1.0e-23 115.5 410 27.8
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 5.5e-22 109.8 436 25.7
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.2e-21 108.6 443 26.9
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 3.9e-20 103.6 337 29.4
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 1.1e-19 102.1 427 25.8
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 9.7e-19 99.0 143 37.1
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 2.2e-18 97.8 396 25.5
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 3.7e-18 97.1 319 30.1
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 4.8e-18 96.7 320 28.8
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 1.4e-17 95.1 342 27.8
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 2.4e-17 94.4 322 25.8
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 3.5e-16 90.5 394 22.3
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 1.0e-15 89.0 385 23.4
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 6.7e-12 76.3 390 24.1
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.0e-08 64.7 76 38.2
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 5.9e-08 63.2 377 24.9


User provided reference genes

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