Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13717 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 3.1e-53 212.6 99 100.0
SEGI_27307 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 4.0e-48 195.7 91 100.0
SEGI_17113 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 1.2e-44 184.1 99 84.8
SEGI_27527 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 1.2e-44 184.1 99 84.8
SEGI_36785 Sequoiadendron giganteum HOM05D000054 ORTHO05D000171 2.1e-12 77.0 93 47.3
SEGI_15551 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 5.6e-10 68.9 96 47.9
SEGI_33669 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 5.6e-10 68.9 96 47.9
arahy.Tifrunner.gnm1.ann1.4FK00S Arachis hypogaea HOM05D000054 ORTHO05D000171 1.3e-09 67.8 88 40.9
arahy.Tifrunner.gnm1.ann1.H4GB3B Arachis hypogaea HOM05D000054 ORTHO05D000171 3.6e-09 66.2 95 37.9
Duzib268G0799 Durio zibethinus HOM05D000054 ORTHO05D000171 4.8e-09 65.9 111 42.3
Lalb_Chr01g0016471 Lupinus albus HOM05D000054 ORTHO05D000171 4.8e-09 65.9 115 37.4
arahy.Tifrunner.gnm1.ann1.LLA61B Arachis hypogaea HOM05D000054 ORTHO05D000171 6.2e-09 65.5 94 37.2
Nn3g21024 Nelumbo nucifera HOM05D000054 ORTHO05D000171 6.2e-09 65.5 79 45.6
Ca_06021_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 8.1e-09 65.1 111 35.1
Duzib268G1389 Durio zibethinus HOM05D000054 ORTHO05D000171 8.1e-09 65.1 111 39.6
Ciclev10018908m.g Citrus clementina HOM05D000054 ORTHO05D000171 1.1e-08 64.7 106 36.8
HanXRQChr04g0100221 Helianthus annuus HOM05D000054 ORTHO05D000171 1.1e-08 64.7 99 37.4
Aqoxy4G00207 Aquilegia oxysepala HOM05D003602 ORTHO05D004808 1.4e-08 64.3 83 42.2
Aqoxy4G00426 Aquilegia oxysepala HOM05D000054 ORTHO05D002584 1.4e-08 64.3 107 37.4
arahy.Tifrunner.gnm1.ann1.R3XEM4 Arachis hypogaea HOM05D000054 ORTHO05D000171 1.8e-08 63.9 104 36.5
SEGI_04172 Sequoiadendron giganteum HOM05D009358 ORTHO05D015186 1.8e-08 63.9 71 45.1
SEGI_37063 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 1.8e-08 63.9 83 41.0
Lsat_1_v5_gn_4_37761 Lactuca sativa HOM05D000054 ORTHO05D000171 2.4e-08 63.5 104 40.4
arahy.Tifrunner.gnm1.ann1.X1JR32 Arachis hypogaea HOM05D000054 ORTHO05D000171 3.1e-08 63.2 88 37.5
HanXRQChr11g0331141 Helianthus annuus HOM05D000054 ORTHO05D000171 3.1e-08 63.2 100 36.0
MBI07_g00476_MAGBIO Magnolia biondii HOM05D003004 ORTHO05D003860 3.1e-08 63.2 73 52.1
Phvul.005G079733 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 3.1e-08 63.2 75 48.0
TWI39G0504 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 3.1e-08 63.2 105 40.0
MELO3C014454.2 Cucumis melo HOM05D000054 ORTHO05D000171 4.0e-08 62.8 99 36.4
GSVIVG01014110001 Vitis vinifera HOM05D000054 ORTHO05D000171 5.3e-08 62.4 90 40.0
Cfa001073 Carpinus fangiana HOM05D000054 ORTHO05D002584 6.9e-08 62.0 79 43.0
ClCG11G017240 Citrullus lanatus HOM05D000054 ORTHO05D000171 6.9e-08 62.0 80 42.5
Lalb_Chr03g0031281 Lupinus albus HOM05D000054 ORTHO05D000171 6.9e-08 62.0 80 43.8
TWI38G2049 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 6.9e-08 62.0 109 35.8
Manes.17G061400 Manihot esculenta HOM05D000054 ORTHO05D000171 9.0e-08 61.6 101 37.6
Sopen07g029180 Solanum pennellii HOM05D000054 ORTHO05D000171 9.0e-08 61.6 80 36.2
Aqoxy4G00208 Aquilegia oxysepala HOM05D000054 ORTHO05D000171 1.2e-07 61.2 109 38.5
PSO528G0226 Papaver somniferum HOM05D000054 ORTHO05D000171 1.2e-07 61.2 65 44.6
Lj3g0027719 Lotus japonicus HOM05D000054 ORTHO05D000171 1.5e-07 60.8 94 35.1
Medtr5g083910 Medicago truncatula HOM05D000054 ORTHO05D000171 1.5e-07 60.8 111 33.3
RcHm_v2.0_Chr5g0012301 Rosa chinensis HOM05D000054 ORTHO05D000171 1.5e-07 60.8 77 42.9
Nn6g34448 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.0e-07 60.5 85 40.0
Os04g0616700 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000171 2.0e-07 60.5 87 37.9
Prupe.4G069700 Prunus persica HOM05D000054 ORTHO05D000171 2.0e-07 60.5 103 35.0
SEGI_00939 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 2.0e-07 60.5 103 33.0
Solyc07g055810.3 Solanum lycopersicum HOM05D000054 ORTHO05D000171 2.0e-07 60.5 80 36.2
SGA_v2.0_scaffold181G39759 Striga asiatica HOM05D000054 ORTHO05D000171 2.0e-07 60.5 79 38.0
MSTRG.14249 Avicennia marina HOM05D000054 ORTHO05D002584 2.6e-07 60.1 93 40.9
Haze_01133 Corylus avellana HOM05D000054 ORTHO05D000171 2.6e-07 60.1 91 36.3
MBI06_g10741_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D000171 2.6e-07 60.1 85 37.6
MD11G1268200 Malus domestica HOM05D000054 ORTHO05D002584 2.6e-07 60.1 114 34.2
Sed0026880 Sechium edule HOM05D000054 ORTHO05D000171 2.6e-07 60.1 80 42.5
VMungo1080G1380 Vigna mungo HOM05D000054 ORTHO05D000171 2.6e-07 60.1 84 39.3
Cfa001070 Carpinus fangiana HOM05D000054 ORTHO05D002584 3.4e-07 59.7 90 40.0
Haze_09285 Corylus avellana HOM05D000054 ORTHO05D002584 3.4e-07 59.7 90 40.0
MELO3C025663.2 Cucumis melo HOM05D000054 ORTHO05D000171 3.4e-07 59.7 108 35.2
HanXRQChr13g0406051 Helianthus annuus HOM05D000054 ORTHO05D002584 3.4e-07 59.7 98 38.8
MD11G1268400 Malus domestica HOM05D000054 ORTHO05D002584 3.4e-07 59.7 112 32.1
Sed0016037 Sechium edule HOM05D000054 ORTHO05D000171 3.4e-07 59.7 104 36.5
DCAR_017590 Daucus carota HOM05D000043 ORTHO05D000223 4.4e-07 59.3 100 38.0
Dinv18389 Davidia involucrata HOM05D000054 ORTHO05D000171 4.4e-07 59.3 79 39.2
unitig_578.g16294 Utricularia gibba HOM05D000054 ORTHO05D002584 4.4e-07 59.3 74 41.9
CsaV3_6G037920 Cucumis sativus L. HOM05D000054 ORTHO05D000171 5.8e-07 58.9 102 34.3
A05p34640 Brassica napus HOM05D000054 ORTHO05D000171 7.6e-07 58.5 98 34.7
Manes.03G092416 Manihot esculenta HOM05D000054 ORTHO05D000171 7.6e-07 58.5 91 40.7
Medtr2g073650 Medicago truncatula HOM05D000054 ORTHO05D000171 7.6e-07 58.5 83 37.3
RcHm_v2.0_Chr2g0150431 Rosa chinensis HOM05D000054 ORTHO05D000171 7.6e-07 58.5 115 33.0
Sabra16G0253900 Salix brachista HOM05D000054 ORTHO05D005077 7.6e-07 58.5 111 36.9
Thecc.07G129300 Theobroma cacao HOM05D000054 ORTHO05D000171 7.6e-07 58.5 110 32.7
TAR627G0267 Trochodendron aralioides HOM05D000054 ORTHO05D002584 7.6e-07 58.5 112 35.7
CDE03G0359 Ceratophyllum demersum HOM05D000054 ORTHO05D000171 9.9e-07 58.2 89 40.4
HanXRQChr16g0519761 Helianthus annuus HOM05D000054 ORTHO05D000171 9.9e-07 58.2 106 35.8
Nitab4.5_0001121g0070 Nicotiana tabacum HOM05D000054 ORTHO05D000171 9.9e-07 58.2 99 33.3
Peaxi162Scf00154g00930 Petunia axillaris HOM05D000054 ORTHO05D000171 9.9e-07 58.2 80 36.2
Phvul.005G078500 Phaseolus vulgaris HOM05D000054 ORTHO05D000171 9.9e-07 58.2 91 39.6
RcHm_v2.0_Chr5g0034101 Rosa chinensis HOM05D000054 ORTHO05D002584 9.9e-07 58.2 107 34.6
Sabra04G0082600 Salix brachista HOM05D000054 ORTHO05D000171 9.9e-07 58.2 76 38.2
SEGI_39899 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 9.9e-07 58.2 93 35.5
FvH4_6g37550 Fragaria vesca HOM05D000054 ORTHO05D000171 1.3e-06 57.8 119 31.1
HanXRQChr16g0516121 Helianthus annuus HOM05D000054 ORTHO05D002584 1.3e-06 57.8 104 35.6
HanXRQChr16g0519371 Helianthus annuus HOM05D000054 ORTHO05D002584 1.3e-06 57.8 108 36.1
Nn3g21035 Nelumbo nucifera HOM05D000054 ORTHO05D000171 1.3e-06 57.8 89 40.4
Phvul.005G077500 Phaseolus vulgaris HOM05D000054 ORTHO05D002584 1.3e-06 57.8 105 32.4
Psat2g027400 Pisum sativum HOM05D000054 ORTHO05D000171 1.3e-06 57.8 86 40.7
RcHm_v2.0_Chr5g0012271 Rosa chinensis HOM05D000054 ORTHO05D000171 1.3e-06 57.8 77 41.6
Sed0009878 Sechium edule HOM05D000054 ORTHO05D000171 1.3e-06 57.8 110 31.8
PGSC0003DMG400017291 Solanum tuberosum HOM05D000054 ORTHO05D000171 1.3e-06 57.8 80 35.0
Actinidia00876 Actinidia chinensis HOM05D000054 ORTHO05D000171 1.7e-06 57.4 78 44.9
A06p04810 Brassica napus HOM05D000054 ORTHO05D000171 1.7e-06 57.4 108 36.1
BraA06t23685Z Brassica rapa HOM05D000054 ORTHO05D000171 1.7e-06 57.4 108 36.1
Haze_09291 Corylus avellana HOM05D000054 ORTHO05D002584 1.7e-06 57.4 84 36.9
CsaV3_4G032880 Cucumis sativus L. HOM05D000054 ORTHO05D000171 1.7e-06 57.4 106 34.9
Lalb_Chr25g0285661 Lupinus albus HOM05D000054 ORTHO05D000171 1.7e-06 57.4 99 34.3
QL08p021107 Quercus lobata HOM05D000054 ORTHO05D002584 1.7e-06 57.4 74 43.2
Thecc.07G129900 Theobroma cacao HOM05D000054 ORTHO05D000171 1.7e-06 57.4 111 32.4
Atru.chr6.3566 Acer truncatum HOM05D000054 ORTHO05D000171 2.2e-06 57.0 107 31.8
Aqoxy4G00205 Aquilegia oxysepala HOM05D000054 ORTHO05D000171 2.2e-06 57.0 77 40.3
CiPaw.04G135100 Carya illinoinensis HOM05D000054 ORTHO05D000171 2.2e-06 57.0 92 37.0
Ca_06296_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 2.2e-06 57.0 105 32.4
Ciclev10014129m.g Citrus clementina HOM05D000054 ORTHO05D000171 2.2e-06 57.0 106 35.8
Cc05_g10830 Coffea canephora HOM05D000054 ORTHO05D000171 2.2e-06 57.0 74 43.2
COL.COLO4_17487 Corchorus olitorius HOM05D000054 ORTHO05D000171 2.2e-06 57.0 93 32.3
Haze_13459 Corylus avellana HOM05D000054 ORTHO05D000171 2.2e-06 57.0 78 38.5
MELO3C025662.2 Cucumis melo HOM05D000054 ORTHO05D000171 2.2e-06 57.0 113 35.4
FAN16G2145 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.2e-06 57.0 84 36.9
FAN21G1730 Fragaria x ananassa HOM05D000054 ORTHO05D000171 2.2e-06 57.0 84 36.9
MD10G1273300 Malus domestica HOM05D000054 ORTHO05D000171 2.2e-06 57.0 83 36.1
Medtr2g074980 Medicago truncatula HOM05D000054 ORTHO05D000171 2.2e-06 57.0 79 38.0
Nitab4.5_0002737g0090 Nicotiana tabacum HOM05D000054 ORTHO05D000171 2.2e-06 57.0 78 37.2
Sopen02g020850 Solanum pennellii HOM05D000054 ORTHO05D000171 2.2e-06 57.0 110 35.5
Ca_03935_v3 Cicer arietinum L. HOM05D000054 ORTHO05D000171 2.9e-06 56.6 104 34.6
FvH4_3g06810 Fragaria vesca HOM05D000054 ORTHO05D000171 2.9e-06 56.6 84 36.9
Gohir.A01G048500 Gossypium hirsutum HOM05D000054 ORTHO05D000171 2.9e-06 56.6 79 39.2
Medtr2g074990 Medicago truncatula HOM05D000054 ORTHO05D000171 2.9e-06 56.6 74 40.5
Medtr8g059605 Medicago truncatula HOM05D000054 ORTHO05D000171 2.9e-06 56.6 109 31.2
Nn6g34447 Nelumbo nucifera HOM05D000054 ORTHO05D000171 2.9e-06 56.6 79 40.5
SEGI_11385 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 2.9e-06 56.6 108 36.1
SEGI_31895 Sequoiadendron giganteum HOM05D000054 ORTHO05D002584 2.9e-06 56.6 103 32.0
GSVIVG01020786001 Vitis vinifera HOM05D000054 ORTHO05D000171 2.9e-06 56.6 79 39.2
Carub.0001s0698 Capsella rubella HOM05D000054 ORTHO05D000171 3.8e-06 56.2 113 32.7
Cfa001088 Carpinus fangiana HOM05D000054 ORTHO05D002584 3.8e-06 56.2 81 38.3
Cfa019529 Carpinus fangiana HOM05D000054 ORTHO05D002584 3.8e-06 56.2 85 38.8
CDE04G2853 Ceratophyllum demersum HOM05D000054 ORTHO05D000171 3.8e-06 56.2 86 43.0
MELO3C025668.2 Cucumis melo HOM05D000054 ORTHO05D000171 3.8e-06 56.2 106 34.9
Psat1g211600 Pisum sativum HOM05D000054 ORTHO05D002584 3.8e-06 56.2 109 33.9
QL05p051666 Quercus lobata HOM05D000054 ORTHO05D000171 3.8e-06 56.2 88 38.6
TPR.G16469 Trifolium pratense HOM05D000054 ORTHO05D000171 3.8e-06 56.2 105 34.3
TPR.G17438 Trifolium pratense HOM05D000054 ORTHO05D002584 3.8e-06 56.2 85 37.6
TWI73G0043 Tripterygium wilfordii HOM05D000054 ORTHO05D000171 3.8e-06 56.2 82 39.0
FAN11G3361 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.9e-06 55.8 80 37.5
FAN21G2359 Fragaria x ananassa HOM05D000054 ORTHO05D000171 4.9e-06 55.8 76 39.5
Gohir.D11G304200 Gossypium hirsutum HOM05D000054 ORTHO05D000171 4.9e-06 55.8 100 37.0
Nn3g21029 Nelumbo nucifera HOM05D000054 ORTHO05D000171 4.9e-06 55.8 78 38.5
Nn3g21030 Nelumbo nucifera HOM05D000054 ORTHO05D000171 4.9e-06 55.8 72 43.1
Nn3g21039 Nelumbo nucifera HOM05D000054 ORTHO05D000171 4.9e-06 55.8 80 38.8
Os09g0345300 Oryza sativa ssp. japonica HOM05D000054 ORTHO05D000171 4.9e-06 55.8 69 43.5
Psat0s1728g0040 Pisum sativum HOM05D000054 ORTHO05D000171 4.9e-06 55.8 79 38.0
Potri.004G135500 Populus trichocarpa HOM05D000054 ORTHO05D000171 4.9e-06 55.8 76 36.8
PGR083G2082 Punica granatum HOM05D000054 ORTHO05D000171 4.9e-06 55.8 74 37.8
QL04p017520 Quercus lobata HOM05D000054 ORTHO05D000171 4.9e-06 55.8 93 36.6
QL05p051919 Quercus lobata HOM05D000054 ORTHO05D000171 4.9e-06 55.8 93 36.6
Sp1g06370 Schrenkiella parvula HOM05D000054 ORTHO05D000171 4.9e-06 55.8 119 33.6
CSS0000613 Camellia sinensis var. sinensis HOM05D000054 ORTHO05D000171 6.4e-06 55.5 108 32.4
CiPaw.09G134000 Carya illinoinensis HOM05D000054 ORTHO05D000171 6.4e-06 55.5 86 39.5
ClCG09G022240 Citrullus lanatus HOM05D000054 ORTHO05D000171 6.4e-06 55.5 102 31.4
Thhalv10010902m.g Eutrema salsugineum HOM05D000054 ORTHO05D014621 6.4e-06 55.5 68 36.8
Lsat_1_v5_gn_4_37780 Lactuca sativa HOM05D000054 ORTHO05D000171 6.4e-06 55.5 90 35.6
MD05G1295000 Malus domestica HOM05D000054 ORTHO05D002584 6.4e-06 55.5 77 40.3
MD10G1273000 Malus domestica HOM05D000054 ORTHO05D000171 6.4e-06 55.5 77 40.3
Medtr8g059615 Medicago truncatula HOM05D000054 ORTHO05D000171 6.4e-06 55.5 109 30.3
Psat5g234160 Pisum sativum HOM05D000054 ORTHO05D002584 6.4e-06 55.5 85 37.6
HPP92_022984 Vanilla planifolia HOM05D000054 ORTHO05D000171 6.4e-06 55.5 92 41.3
GSVIVG01014113001 Vitis vinifera HOM05D000054 ORTHO05D000171 6.4e-06 55.5 74 41.9
BcaB06g25350 Brassica carinata HOM05D000054 ORTHO05D000171 8.4e-06 55.1 106 34.9
CARHR007440 Cardamine hirsuta HOM05D000054 ORTHO05D000171 8.4e-06 55.1 82 37.8
Cfa001069 Carpinus fangiana HOM05D000054 ORTHO05D002584 8.4e-06 55.1 87 37.9
Haze_05440 Corylus avellana HOM05D000054 ORTHO05D000171 8.4e-06 55.1 87 37.9
Migut.M00697 Erythranthe guttata HOM05D000054 ORTHO05D000171 8.4e-06 55.1 112 33.9
FAN21G3729 Fragaria x ananassa HOM05D000054 ORTHO05D000171 8.4e-06 55.1 102 33.3
Gohir.D11G304309 Gossypium hirsutum HOM05D000054 ORTHO05D002584 8.4e-06 55.1 110 34.5
LjContig00310g0009593 Lotus japonicus HOM05D000054 ORTHO05D000171 8.4e-06 55.1 96 35.4
Nn6g34438 Nelumbo nucifera HOM05D000054 ORTHO05D000171 8.4e-06 55.1 106 37.7
PGR102G2061 Punica granatum HOM05D000054 ORTHO05D000171 8.4e-06 55.1 74 36.5
QL08p043290 Quercus lobata HOM05D000054 ORTHO05D000171 8.4e-06 55.1 108 32.4
RcHm_v2.0_Chr5g0029891 Rosa chinensis HOM05D000054 ORTHO05D000171 8.4e-06 55.1 80 41.2
Sed0005426 Sechium edule HOM05D000054 ORTHO05D000171 8.4e-06 55.1 89 38.2
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 8.4e-06 55.1 71 40.8


User provided reference genes

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