Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 1.4e-181 639.4 312 100.0
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 1.4e-144 516.5 310 77.7
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 1.3e-142 510.0 310 75.8
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 8.4e-142 507.3 310 75.2
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 7.1e-141 504.2 310 75.2
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 2.1e-140 502.7 310 75.2
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 2.1e-140 502.7 310 75.2
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.7e-140 502.3 310 74.8
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 3.5e-140 501.9 310 74.8
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 4.6e-140 501.5 310 75.5
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 7.9e-140 500.7 310 74.8
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 7.9e-140 500.7 310 74.2
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 1.3e-139 500.0 310 73.5
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.8e-139 499.6 310 74.8
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 3.0e-139 498.8 310 74.2
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 6.7e-139 497.7 310 74.2
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.9e-138 496.1 314 73.9
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 2.5e-138 495.7 309 74.1
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 4.3e-138 495.0 310 73.2
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 4.3e-138 495.0 314 72.6
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 7.4e-138 494.2 310 73.2
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 7.4e-138 494.2 310 71.9
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 7.4e-138 494.2 310 73.5
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 9.6e-138 493.8 310 73.2
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.6e-137 493.0 315 73.7
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 1.1e-136 490.3 310 74.5
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.1e-136 490.3 310 73.2
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.1e-136 490.3 310 73.2
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.8e-136 489.6 310 74.2
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 2.4e-136 489.2 310 72.3
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 2.4e-136 489.2 310 72.6
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 6.9e-136 487.6 310 72.3
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 9.0e-136 487.3 317 71.3
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 9.0e-136 487.3 310 73.2
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 9.0e-136 487.3 310 72.9
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 9.0e-136 487.3 310 72.6
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 9.0e-136 487.3 310 72.6
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 1.5e-135 486.5 310 71.3
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 1.5e-135 486.5 337 67.1
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 2.0e-135 486.1 310 70.3
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 2.0e-135 486.1 310 73.9
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 2.6e-135 485.7 310 72.3
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 3.4e-135 485.3 310 72.6
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 1.0e-134 483.8 310 72.6
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 1.3e-134 483.4 324 70.1
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.7e-134 483.0 314 70.7
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 1.7e-134 483.0 310 71.9
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 3.8e-134 481.9 310 71.9
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 3.8e-134 481.9 312 73.4
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 3.8e-134 481.9 323 70.9
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 4.9e-134 481.5 310 71.6
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 6.5e-134 481.1 310 69.7
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 4.2e-133 478.4 310 72.3
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 5.5e-133 478.0 322 70.8
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 1.6e-132 476.5 322 70.5
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 1.6e-132 476.5 322 70.5
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 1.6e-132 476.5 310 71.6
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 7.9e-132 474.2 310 69.0
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 1.3e-131 473.4 304 73.4
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 1.8e-131 473.0 310 70.3
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 1.8e-131 473.0 322 69.9
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 1.8e-131 473.0 310 71.9
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 3.9e-131 471.9 310 71.9
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 6.7e-131 471.1 339 65.8
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 8.7e-131 470.7 313 70.9
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 1.9e-130 469.5 300 72.0
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 1.9e-130 469.5 315 69.5
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 1.9e-130 469.5 310 68.7
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 2.5e-130 469.2 318 70.1
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 5.7e-130 468.0 311 70.4
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 8.2e-129 464.2 310 68.1
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 1.4e-128 463.4 310 70.0
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 1.4e-128 463.4 300 72.0
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 2.6e-127 459.1 378 60.3
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 2.6e-127 459.1 311 69.8
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 5.9e-127 458.0 310 69.4
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 5.9e-127 458.0 292 72.3
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 1.0e-126 457.2 316 68.0
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 1.3e-126 456.8 310 69.0
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.7e-126 456.4 310 68.4
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 1.7e-126 456.4 310 69.0
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 2.2e-126 456.1 300 71.0
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 2.2e-126 456.1 310 68.7
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 5.0e-126 454.9 307 70.4
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 1.1e-125 453.8 311 69.8
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 1.4e-125 453.4 310 69.4
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.9e-125 453.0 306 68.6
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 1.9e-125 453.0 310 69.4
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 3.2e-125 452.2 310 68.7
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 1.2e-124 450.3 310 67.7
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 4.6e-124 448.4 310 68.1
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 1.0e-123 447.2 302 68.9
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 2.3e-123 446.0 310 67.4
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 7.4e-122 441.0 310 67.1
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 1.1e-117 427.2 302 67.9
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.1e-114 417.2 310 64.8
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.5e-111 406.8 267 71.9
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 7.7e-111 404.4 313 63.3
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 8.5e-110 401.0 311 61.4
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 2.7e-108 396.0 305 63.0
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 2.2e-105 386.3 253 72.7
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 2.2e-102 376.3 340 56.8
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 4.7e-92 342.0 301 55.8
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.0e-91 340.9 219 74.4
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 2.8e-89 332.8 213 73.2
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.3e-78 296.6 222 66.2
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.2e-71 274.2 178 72.5
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 1.2e-58 231.1 301 43.5
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 3.9e-54 216.1 190 61.6
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 4.0e-51 206.1 140 66.4
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 2.7e-47 193.4 118 74.6
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 2.3e-46 190.3 318 37.4
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 9.9e-42 174.9 120 70.0
MELO3C004085.2 Cucumis melo HOM05D000306 ORTHO05D007657 2.7e-31 140.2 94 61.7
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 1.0e-30 138.3 72 80.6
MELO3C028573.2 Cucumis melo HOM05D000306 ORTHO05D007657 5.6e-29 132.5 104 55.8
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 5.1e-22 109.4 84 63.1
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 2.8e-20 103.6 84 60.7
Pp3s30_470 Physcomitrium patens HOM05D000306 ORTHO05D317356 4.5e-18 96.3 310 29.4
arahy.Tifrunner.gnm1.ann1.MK7H36 Arachis hypogaea HOM05D000306 ORTHO05D007657 1.6e-12 77.8 42 78.6
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 1.6e-12 77.8 67 58.2
Cre12.g543902 Chlamydomonas reinhardtii HOM05D000306 ORTHO05D007657 6.9e-11 72.4 223 28.3
MCO11G321 Micromonas commoda HOM05D002248 ORTHO05D006121 1.5e-10 71.2 245 26.9


User provided reference genes

Program Settings