Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13685 Sequoiadendron giganteum HOM05D006347 ORTHO05D007835 7.9e-112 407.1 208 100.0
Mapoly0004s0056 Marchantia polymorpha HOM05D006347 ORTHO05D007835 9.9e-22 107.8 137 45.3
AagrBONN_evm.TU.Sc2ySwM_117.1516 Anthoceros agrestis HOM05D006347 ORTHO05D007835 2.7e-19 99.8 132 44.7
Pp3c4_24670 Physcomitrium patens HOM05D006347 ORTHO05D007835 1.7e-18 97.1 137 43.1
CBR_g54933 Chara braunii HOM05D006347 ORTHO05D007835 2.5e-17 93.2 161 36.6
PSO063G2566 Papaver somniferum HOM05D006347 ORTHO05D007835 1.6e-16 90.5 118 46.6
GSVIVG01031423001 Vitis vinifera HOM05D006347 ORTHO05D007835 1.6e-16 90.5 134 40.3
Nn2g13927 Nelumbo nucifera HOM05D006347 ORTHO05D007835 1.1e-15 87.8 138 41.3
Dinv29404 Davidia involucrata HOM05D006347 ORTHO05D007835 4.0e-15 85.9 159 34.6
ATR0665G610 Amborella trichopoda HOM05D006347 ORTHO05D007835 1.5e-14 84.0 122 39.3
Cfa021537 Carpinus fangiana HOM05D006347 ORTHO05D007835 3.4e-14 82.8 103 46.6
HanXRQChr07g0197561 Helianthus annuus HOM05D006347 ORTHO05D007835 2.2e-13 80.1 136 36.0
BcaB05g22687 Brassica carinata HOM05D006347 ORTHO05D007835 2.9e-13 79.7 134 34.3
Aqoxy1G01013 Aquilegia oxysepala HOM05D006347 ORTHO05D007835 3.8e-13 79.3 97 46.4
Ciclev10028160m.g Citrus clementina HOM05D006347 ORTHO05D007835 3.8e-13 79.3 109 41.3
Haze_23489 Corylus avellana HOM05D006347 ORTHO05D007835 4.9e-13 79.0 100 45.0
ECA238G1908 Erigeron canadensis HOM05D006347 ORTHO05D007835 8.4e-13 78.2 91 48.4
Lsat_1_v5_gn_2_96801 Lactuca sativa HOM05D006347 ORTHO05D007835 1.1e-12 77.8 101 43.6
CiPaw.14G105000 Carya illinoinensis HOM05D006347 ORTHO05D007835 1.9e-12 77.0 100 44.0
Haze_23480 Corylus avellana HOM05D006347 ORTHO05D007835 5.4e-12 75.5 118 39.0
RcHm_v2.0_Chr5g0055941 Rosa chinensis HOM05D006347 ORTHO05D007835 7.1e-12 75.1 115 38.3
Actinidia24168 Actinidia chinensis HOM05D006347 ORTHO05D007835 9.3e-12 74.7 91 47.3
CANSAT56G1452 Cannabis sativa HOM05D006347 ORTHO05D007835 9.3e-12 74.7 87 49.4
Cc01_g10020 Coffea canephora HOM05D006347 ORTHO05D007835 9.3e-12 74.7 127 37.0
SGA_v2.0_scaffold27G11587 Striga asiatica HOM05D006347 ORTHO05D007835 9.3e-12 74.7 87 44.8
Hma1.2p1_0884F.1_g232450 Hydrangea macrophylla HOM05D006347 ORTHO05D007835 1.2e-11 74.3 98 46.9
Manes.04G010900 Manihot esculenta HOM05D006347 ORTHO05D007835 1.2e-11 74.3 137 35.8
Thhalv10013199m.g Eutrema salsugineum HOM05D006347 ORTHO05D007835 1.6e-11 73.9 129 33.3
QL01p014117 Quercus lobata HOM05D006347 ORTHO05D007835 1.6e-11 73.9 94 44.7
Prupe.6G116300 Prunus persica HOM05D006347 ORTHO05D007835 2.7e-11 73.2 127 35.4
MD11G1153600 Malus domestica HOM05D006347 ORTHO05D007835 4.6e-11 72.4 101 41.6
AL6G33930 Arabidopsis lyrata HOM05D006347 ORTHO05D007835 6.0e-11 72.0 132 31.8
AT5G22820 Arabidopsis thaliana HOM05D006347 ORTHO05D007835 6.0e-11 72.0 123 32.5
BcaC03g13920 Brassica carinata HOM05D006347 ORTHO05D007835 1.0e-10 71.2 135 34.1
FvH4_3g29990 Fragaria vesca HOM05D006347 ORTHO05D007835 1.0e-10 71.2 89 46.1
FAN11G3746 Fragaria x ananassa HOM05D006347 ORTHO05D007835 1.0e-10 71.2 89 46.1
Nitab4.5_0005038g0010 Nicotiana tabacum HOM05D006347 ORTHO05D007835 1.0e-10 71.2 124 35.5
Sp6g22600 Schrenkiella parvula HOM05D006347 ORTHO05D007835 1.0e-10 71.2 132 31.8
Atru.chr3.3422 Acer truncatum HOM05D006347 ORTHO05D007835 1.3e-10 70.9 101 39.6
Carub.0006s2054 Capsella rubella HOM05D006347 ORTHO05D007835 1.8e-10 70.5 132 31.8
Peaxi162Scf00157g00213 Petunia axillaris HOM05D006347 ORTHO05D007835 1.8e-10 70.5 124 35.5
THA.LOC104810888 Tarenaya hassleriana HOM05D006347 ORTHO05D007835 2.3e-10 70.1 132 30.3
C02p11300 Brassica napus HOM05D006347 ORTHO05D007835 3.0e-10 69.7 108 37.0
Duzib168G1158 Durio zibethinus HOM05D006347 ORTHO05D007835 3.0e-10 69.7 124 33.1
Medtr2g084580 Medicago truncatula HOM05D006347 ORTHO05D007835 3.0e-10 69.7 113 36.3
Sc12g0003850 Simmondsia chinensis HOM05D006347 ORTHO05D007835 3.0e-10 69.7 132 34.1
BNapus_Darmor_BZH_scaffold_38p00360 Brassica napus HOM05D006347 ORTHO05D007835 3.9e-10 69.3 108 38.0
CAN.G1432.26 Capsicum annuum HOM05D006347 ORTHO05D007835 3.9e-10 69.3 126 34.1
Eucgr.J00411 Eucalyptus grandis HOM05D006347 ORTHO05D007835 3.9e-10 69.3 99 42.4
CARHR190750 Cardamine hirsuta HOM05D006347 ORTHO05D007835 8.7e-10 68.2 126 33.3
CsaV3_6G014560 Cucumis sativus L. HOM05D006347 ORTHO05D007835 8.7e-10 68.2 140 35.0
FAN25G1668 Fragaria x ananassa HOM05D006347 ORTHO05D007835 8.7e-10 68.2 89 44.9
Gohir.A07G106500 Gossypium hirsutum HOM05D006347 ORTHO05D007835 8.7e-10 68.2 125 30.4
Gorai.001G118600 Gossypium raimondii HOM05D006347 ORTHO05D007835 8.7e-10 68.2 125 30.4
arahy.Tifrunner.gnm1.ann1.PRK8FW Arachis hypogaea HOM05D006347 ORTHO05D007835 1.1e-09 67.8 113 34.5
EL10Ac9g21046 Beta vulgaris HOM05D006347 ORTHO05D007835 1.1e-09 67.8 110 39.1
Thecc.09G294500 Theobroma cacao HOM05D006347 ORTHO05D007835 1.5e-09 67.4 125 31.2
MSTRG.18715 Avicennia marina HOM05D006347 ORTHO05D007835 1.9e-09 67.0 87 41.4
Potri.009G151100 Populus trichocarpa HOM05D006347 ORTHO05D007835 2.5e-09 66.6 126 32.5
FAN21G3835 Fragaria x ananassa HOM05D006347 ORTHO05D007835 4.3e-09 65.9 115 36.5
TPR.G32394 Trifolium pratense HOM05D006347 ORTHO05D007835 4.3e-09 65.9 113 34.5
DCAR_015490 Daucus carota HOM05D006347 ORTHO05D007835 5.6e-09 65.5 95 45.3
BolC2t07198H Brassica oleracea HOM05D006347 ORTHO05D007835 7.4e-09 65.1 110 39.1
Ca_01691_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.4e-09 65.1 113 35.4
Ca_30937_v3 Cicer arietinum L. HOM05D006347 ORTHO05D007835 7.4e-09 65.1 113 35.4
SalBow6G0094 Salvia bowleyana HOM05D006347 ORTHO05D007835 7.4e-09 65.1 97 40.2
Migut.D02321 Erythranthe guttata HOM05D006347 ORTHO05D007835 9.6e-09 64.7 87 39.1
Sabra09G0119700 Salix brachista HOM05D006347 ORTHO05D007835 9.6e-09 64.7 150 28.7
MELO3C021469.2 Cucumis melo HOM05D006347 ORTHO05D007835 1.3e-08 64.3 151 32.5
Gohir.D07G110400 Gossypium hirsutum HOM05D006347 ORTHO05D007835 1.3e-08 64.3 125 29.6
VMungo1080G1358 Vigna mungo HOM05D006347 ORTHO05D007835 1.3e-08 64.3 123 34.1
PGSC0003DMG400007153 Solanum tuberosum HOM05D006347 ORTHO05D007835 1.6e-08 63.9 127 34.6
CSS0047528 Camellia sinensis var. sinensis HOM05D006347 ORTHO05D007835 2.1e-08 63.5 120 38.3
Glyma.13G320700 Glycine max HOM05D006347 ORTHO05D007835 2.8e-08 63.2 109 33.9
PGR119G2351 Punica granatum HOM05D006347 ORTHO05D007835 2.8e-08 63.2 98 40.8
Solyc06g074690.3 Solanum lycopersicum HOM05D006347 ORTHO05D007835 2.8e-08 63.2 127 33.9
Sopen06g031100 Solanum pennellii HOM05D006347 ORTHO05D007835 2.8e-08 63.2 127 33.9
TAR633G2060 Trochodendron aralioides HOM05D006347 ORTHO05D007835 2.8e-08 63.2 74 47.3
AUR62031770 Chenopodium quinoa HOM05D006347 ORTHO05D007835 3.7e-08 62.8 111 34.2
PSO339G5358 Papaver somniferum HOM05D006347 ORTHO05D007835 3.7e-08 62.8 55 54.5
Lj2A998T24 Lonicera japonica HOM05D006347 ORTHO05D007835 4.8e-08 62.4 98 40.8
Lalb_Chr22g0350521 Lupinus albus HOM05D006347 ORTHO05D007835 4.8e-08 62.4 113 31.0
BraA02t05690Z Brassica rapa HOM05D006347 ORTHO05D007835 6.2e-08 62.0 109 34.9
FAN16G0411 Fragaria x ananassa HOM05D006347 ORTHO05D007835 6.2e-08 62.0 96 39.6
Psat5g253920 Pisum sativum HOM05D006347 ORTHO05D007835 1.1e-07 61.2 93 38.7
HPP92_014171 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.1e-07 61.2 94 36.2
HPP92_014151 Vanilla planifolia HOM05D006347 ORTHO05D007835 1.4e-07 60.8 94 36.2
CDE02G2671 Ceratophyllum demersum HOM05D006347 ORTHO05D007835 2.4e-07 60.1 100 33.0
Phvul.005G128700 Phaseolus vulgaris HOM05D006347 ORTHO05D007835 2.4e-07 60.1 123 32.5
Sed0011208 Sechium edule HOM05D006347 ORTHO05D007835 2.4e-07 60.1 125 29.6
Glyma.12G180133 Glycine max HOM05D006347 ORTHO05D007835 3.1e-07 59.7 125 32.8
Aa31LG1G12890 Aethionema arabicum HOM05D006347 ORTHO05D007835 4.0e-07 59.3 126 30.2
AUR62023970 Chenopodium quinoa HOM05D006347 ORTHO05D007835 1.2e-06 57.8 119 33.6
Zm00001eb053190 Zea mays HOM05D006347 ORTHO05D007835 1.2e-06 57.8 104 37.5
COL.COLO4_19257 Corchorus olitorius HOM05D006347 ORTHO05D007835 2.0e-06 57.0 82 40.2
Lj3g0008152 Lotus japonicus HOM05D006347 ORTHO05D007835 5.8e-06 55.5 118 30.5
Os03g0684100 Oryza sativa ssp. japonica HOM05D006347 ORTHO05D007835 5.8e-06 55.5 91 30.8
Haze_23473 Corylus avellana HOM05D006347 ORTHO05D007835 7.6e-06 55.1 100 37.0
unitig_899.g14960 Utricularia gibba HOM05D006347 ORTHO05D007835 9.9e-06 54.7 90 37.8


User provided reference genes

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