Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13560 Sequoiadendron giganteum HOM05D002996 ORTHO05D003536 2.6e-83 312.0 155 100.0
ATR0053G010 Amborella trichopoda HOM05D002996 ORTHO05D003536 1.8e-52 209.5 146 71.2
QL11p004079 Quercus lobata HOM05D002996 ORTHO05D003536 2.4e-52 209.1 146 68.5
TAR622G0566 Trochodendron aralioides HOM05D002996 ORTHO05D003536 5.2e-52 208.0 146 70.5
Cfa007838 Carpinus fangiana HOM05D002996 ORTHO05D003536 6.8e-52 207.6 146 71.9
CiPaw.03G068800 Carya illinoinensis HOM05D002996 ORTHO05D003536 4.4e-51 204.9 145 71.0
Haze_14227 Corylus avellana HOM05D002996 ORTHO05D003536 4.4e-51 204.9 145 71.7
Glyma.11G218000 Glycine max HOM05D002996 ORTHO05D003536 5.8e-51 204.5 146 69.9
Lj6g0006116 Lotus japonicus HOM05D002996 ORTHO05D003536 5.8e-51 204.5 146 68.5
Mapoly0003s0272 Marchantia polymorpha HOM05D002996 ORTHO05D003536 5.8e-51 204.5 146 69.9
SMO361G0084 Selaginella moellendorffii HOM05D002996 ORTHO05D003536 5.8e-51 204.5 146 69.9
Glyma.18G039000 Glycine max HOM05D002996 ORTHO05D003536 7.6e-51 204.1 146 69.2
PGR004G1736 Punica granatum HOM05D002996 ORTHO05D003536 9.9e-51 203.8 146 69.2
CAN.G11.11 Capsicum annuum HOM05D002996 ORTHO05D003536 1.3e-50 203.4 146 67.1
Nn4g24147 Nelumbo nucifera HOM05D002996 ORTHO05D003536 1.3e-50 203.4 146 69.9
TAR374G0579 Trochodendron aralioides HOM05D002996 ORTHO05D003536 1.3e-50 203.4 146 68.5
VMungo1383G2581 Vigna mungo HOM05D002996 ORTHO05D003536 1.3e-50 203.4 146 69.2
CDE10G1224 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 2.9e-50 202.2 146 68.5
CDE10G0501 Ceratophyllum demersum HOM05D002996 ORTHO05D003536 3.8e-50 201.8 146 68.5
Rhsim08G0086100 Rhododendron simsii HOM05D002996 ORTHO05D003536 6.4e-50 201.1 146 69.2
SalBow7G0652 Salvia bowleyana HOM05D002996 ORTHO05D003536 6.4e-50 201.1 143 67.8
GSVIVG01030858001 Vitis vinifera HOM05D002996 ORTHO05D003536 6.4e-50 201.1 146 67.8
ECA232G3169 Erigeron canadensis HOM05D002996 ORTHO05D003536 1.4e-49 199.9 145 66.9
Phvul.001G231700 Phaseolus vulgaris HOM05D002996 ORTHO05D003536 1.4e-49 199.9 146 68.5
Dinv14879 Davidia involucrata HOM05D002996 ORTHO05D003536 1.9e-49 199.5 146 67.1
HanXRQChr07g0193641 Helianthus annuus HOM05D002996 ORTHO05D003536 1.9e-49 199.5 145 69.0
Potri.017G128300 Populus trichocarpa HOM05D002996 ORTHO05D003536 1.9e-49 199.5 146 68.5
SGA_v2.0_scaffold13G06389 Striga asiatica HOM05D002996 ORTHO05D003536 1.9e-49 199.5 145 65.5
Lalb_Chr15g0084771 Lupinus albus HOM05D002996 ORTHO05D003536 2.4e-49 199.1 146 67.1
Medtr3g067690 Medicago truncatula HOM05D002996 ORTHO05D003536 3.2e-49 198.7 146 66.4
CSS0002683 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 4.2e-49 198.4 146 67.1
Gohir.A08G052700 Gossypium hirsutum HOM05D002996 ORTHO05D003536 4.2e-49 198.4 145 68.3
Psat5g122480 Pisum sativum HOM05D002996 ORTHO05D003536 4.2e-49 198.4 146 65.1
TPR.G27148 Trifolium pratense HOM05D002996 ORTHO05D003536 4.2e-49 198.4 146 67.1
AL3G13060 Arabidopsis lyrata HOM05D002996 ORTHO05D003536 7.1e-49 197.6 126 77.0
AT3G03380 Arabidopsis thaliana HOM05D002996 ORTHO05D003536 7.1e-49 197.6 126 77.0
EL10Ac2g04480 Beta vulgaris HOM05D002996 ORTHO05D003536 7.1e-49 197.6 146 67.1
Carub.0003s0254 Capsella rubella HOM05D002996 ORTHO05D003536 7.1e-49 197.6 126 76.2
ECA238G4747 Erigeron canadensis HOM05D002996 ORTHO05D003536 7.1e-49 197.6 145 66.9
Manes.01G115900 Manihot esculenta HOM05D002996 ORTHO05D003536 7.1e-49 197.6 146 67.8
Solyc02g091410.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 7.1e-49 197.6 146 65.1
Sopen02g036030 Solanum pennellii HOM05D002996 ORTHO05D003536 7.1e-49 197.6 146 65.1
Thecc.04G120500 Theobroma cacao HOM05D002996 ORTHO05D003536 7.1e-49 197.6 145 67.6
TWI77G0049 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 7.1e-49 197.6 125 76.0
Lsat_1_v5_gn_4_154680 Lactuca sativa HOM05D002996 ORTHO05D003536 9.2e-49 197.2 145 65.5
SalBow1G7030 Salvia bowleyana HOM05D002996 ORTHO05D003536 9.2e-49 197.2 145 66.2
Zm00001eb252510 Zea mays HOM05D002996 ORTHO05D003536 9.2e-49 197.2 145 66.9
MSTRG.3518 Avicennia marina HOM05D002996 ORTHO05D003536 1.2e-48 196.8 146 65.1
BNapus_Darmor_BZH_scaffold_162p00130 Brassica napus HOM05D002996 ORTHO05D003536 1.2e-48 196.8 126 74.6
BolC1t05834H Brassica oleracea HOM05D002996 ORTHO05D003536 1.2e-48 196.8 126 74.6
CAN.G625.86 Capsicum annuum HOM05D002996 ORTHO05D003536 1.2e-48 196.8 146 65.1
Atru.chr1.1814 Acer truncatum HOM05D002996 ORTHO05D003536 1.6e-48 196.4 145 66.9
MSTRG.15319 Avicennia marina HOM05D002996 ORTHO05D003536 1.6e-48 196.4 145 66.2
HanXRQChr09g0262271 Helianthus annuus HOM05D002996 ORTHO05D003536 1.6e-48 196.4 145 65.5
Manes.02G074800 Manihot esculenta HOM05D002996 ORTHO05D003536 1.6e-48 196.4 146 67.8
Ca_08163_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 2.1e-48 196.1 126 74.6
Ca_17109_v3 Cicer arietinum L. HOM05D002996 ORTHO05D003536 2.1e-48 196.1 126 74.6
Duzib211G0161 Durio zibethinus HOM05D002996 ORTHO05D003536 2.1e-48 196.1 146 66.4
Os02g0712000 Oryza sativa ssp. japonica HOM05D002996 ORTHO05D003536 2.1e-48 196.1 146 65.8
TWI74G1665 Tripterygium wilfordii HOM05D002996 ORTHO05D003536 2.1e-48 196.1 125 76.8
Gohir.A11G162100 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.7e-48 195.7 145 67.6
Gohir.D11G168300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 2.7e-48 195.7 145 67.6
Gorai.004G064500 Gossypium raimondii HOM05D002996 ORTHO05D003536 2.7e-48 195.7 145 67.6
Gorai.007G179800 Gossypium raimondii HOM05D002996 ORTHO05D003536 2.7e-48 195.7 145 67.6
Nitab4.5_0002366g0050 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.7e-48 195.7 146 65.8
Nitab4.5_0004399g0040 Nicotiana tabacum HOM05D002996 ORTHO05D003536 2.7e-48 195.7 146 63.7
Migut.L00466 Erythranthe guttata HOM05D002996 ORTHO05D003536 3.5e-48 195.3 145 63.4
Gohir.D08G062300 Gossypium hirsutum HOM05D002996 ORTHO05D003536 3.5e-48 195.3 145 67.6
AUR62023237 Chenopodium quinoa HOM05D002996 ORTHO05D003536 4.6e-48 194.9 146 67.8
AUR62023190 Chenopodium quinoa HOM05D002996 ORTHO05D003536 6.0e-48 194.5 146 67.8
MELO3C020288.2 Cucumis melo HOM05D002996 ORTHO05D003536 6.0e-48 194.5 145 67.6
Nitab4.5_0003360g0070 Nicotiana tabacum HOM05D002996 ORTHO05D003536 6.0e-48 194.5 127 71.7
Sp3g02390 Schrenkiella parvula HOM05D002996 ORTHO05D003536 6.0e-48 194.5 126 75.4
Solyc03g043660.3 Solanum lycopersicum HOM05D002996 ORTHO05D003536 6.0e-48 194.5 146 63.7
Sopen03g007520 Solanum pennellii HOM05D002996 ORTHO05D003536 6.0e-48 194.5 146 63.7
CANSAT78G2389 Cannabis sativa HOM05D002996 ORTHO05D003536 7.8e-48 194.1 146 65.1
Nitab4.5_0000465g0030 Nicotiana tabacum HOM05D002996 ORTHO05D003536 7.8e-48 194.1 146 65.1
CARHR077410 Cardamine hirsuta HOM05D002996 ORTHO05D003536 1.0e-47 193.7 126 76.2
Medtr3g067695 Medicago truncatula HOM05D002996 ORTHO05D003536 1.0e-47 193.7 125 76.0
ClCG05G010970 Citrullus lanatus HOM05D002996 ORTHO05D003536 1.3e-47 193.4 145 67.6
Thhalv10019951m.g Eutrema salsugineum HOM05D002996 ORTHO05D003536 1.3e-47 193.4 126 74.6
Aqoxy3G00131_Aqoxy3G00132 Aquilegia oxysepala HOM05D002996 ORTHO05D003536 1.7e-47 193.0 145 65.5
FAN18G1791 Fragaria x ananassa HOM05D002996 ORTHO05D003536 1.7e-47 193.0 146 65.1
Aa31LG5G13900 Aethionema arabicum HOM05D002996 ORTHO05D003536 2.3e-47 192.6 126 77.0
A06p26370 Brassica napus HOM05D002996 ORTHO05D003536 2.3e-47 192.6 126 73.8
BNapus_Darmor_BZH_scaffold_78p00120 Brassica napus HOM05D002996 ORTHO05D003536 2.3e-47 192.6 126 73.8
BraA01t04583Z Brassica rapa HOM05D002996 ORTHO05D003536 2.3e-47 192.6 126 73.8
Sabra17G0107000 Salix brachista HOM05D002996 ORTHO05D003536 2.3e-47 192.6 146 67.1
Sed0026936 Sechium edule HOM05D002996 ORTHO05D003536 2.3e-47 192.6 145 66.9
Cc07_g08150 Coffea canephora HOM05D002996 ORTHO05D003536 3.0e-47 192.2 146 65.1
Oeu047419.3 Olea europaea HOM05D002996 ORTHO05D003536 3.9e-47 191.8 125 75.2
CsaV3_3G021610 Cucumis sativus L. HOM05D002996 ORTHO05D003536 5.1e-47 191.4 145 66.9
Sc10g0000820 Simmondsia chinensis HOM05D002996 ORTHO05D003536 5.1e-47 191.4 126 73.8
Eucgr.F02825 Eucalyptus grandis HOM05D002996 ORTHO05D003536 6.6e-47 191.0 126 74.6
MD17G1256700 Malus domestica HOM05D002996 ORTHO05D003536 6.6e-47 191.0 130 72.3
Oeu000903.1 Olea europaea HOM05D002996 ORTHO05D003536 6.6e-47 191.0 146 63.7
PSO478G4946 Papaver somniferum HOM05D002996 ORTHO05D003536 6.6e-47 191.0 145 65.5
THA.LOC104827237 Tarenaya hassleriana HOM05D002996 ORTHO05D003536 6.6e-47 191.0 126 73.8
vmacro18050 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 6.6e-47 191.0 146 65.8
CSS0016713 Camellia sinensis var. sinensis HOM05D002996 ORTHO05D003536 8.7e-47 190.7 146 65.1
PSO017G4487 Papaver somniferum HOM05D002996 ORTHO05D003536 8.7e-47 190.7 145 64.8
Rhsim10G0079400 Rhododendron simsii HOM05D002996 ORTHO05D003536 8.7e-47 190.7 126 74.6
Duzib133G0038 Durio zibethinus HOM05D002996 ORTHO05D003536 1.1e-46 190.3 145 66.2
Peaxi162Scf00118g00223 Petunia axillaris HOM05D002996 ORTHO05D003536 1.1e-46 190.3 147 62.6
Pp3c2_7790 Physcomitrium patens HOM05D002996 ORTHO05D003536 1.1e-46 190.3 126 74.6
Prupe.3G159400 Prunus persica HOM05D002996 ORTHO05D003536 1.1e-46 190.3 146 64.4
Rhsim10G0079500 Rhododendron simsii HOM05D002996 ORTHO05D003536 1.1e-46 190.3 126 74.6
BcaC05g30278 Brassica carinata HOM05D002996 ORTHO05D003536 1.5e-46 189.9 126 73.8
Actinidia17659 Actinidia chinensis HOM05D002996 ORTHO05D003536 1.9e-46 189.5 125 74.4
Lsat_1_v5_gn_2_81521 Lactuca sativa HOM05D002996 ORTHO05D003536 1.9e-46 189.5 125 72.8
Ah.16g101290 Amaranthus hybridus HOM05D002996 ORTHO05D003536 2.5e-46 189.1 150 63.3
Lj2C435G10 Lonicera japonica HOM05D002996 ORTHO05D003536 2.5e-46 189.1 169 57.4
FvH4_5g27890 Fragaria vesca HOM05D002996 ORTHO05D003536 4.3e-46 188.3 146 63.7
RcHm_v2.0_Chr7g0220101 Rosa chinensis HOM05D002996 ORTHO05D003536 4.3e-46 188.3 146 63.7
BcaC05g30533 Brassica carinata HOM05D002996 ORTHO05D003536 9.6e-46 187.2 126 73.0
C05p63430 Brassica napus HOM05D002996 ORTHO05D003536 1.6e-45 186.4 126 73.0
BolC5t35007H Brassica oleracea HOM05D002996 ORTHO05D003536 1.6e-45 186.4 126 73.0
Ciclev10010941m.g Citrus clementina HOM05D002996 ORTHO05D003536 2.8e-45 185.7 169 59.2
A05p43840 Brassica napus HOM05D002996 ORTHO05D003536 4.8e-45 184.9 126 72.2
BraA05t23122Z Brassica rapa HOM05D002996 ORTHO05D003536 4.8e-45 184.9 126 72.2
TPR.G1005 Trifolium pratense HOM05D002996 ORTHO05D003536 8.1e-45 184.1 123 73.2
Sabra04G0059000 Salix brachista HOM05D002996 ORTHO05D003536 1.1e-44 183.7 146 63.7
TPR.G27497 Trifolium pratense HOM05D002996 ORTHO05D003536 1.1e-44 183.7 126 71.4
Hund16206 Selenicereus undatus HOM05D002996 ORTHO05D003536 1.4e-44 183.3 146 63.7
Potri.004G088700 Populus trichocarpa HOM05D002996 ORTHO05D003536 3.1e-44 182.2 146 61.6
Manes.01G116000 Manihot esculenta HOM05D002996 ORTHO05D003536 6.9e-44 181.0 126 69.8
Potri.004G088600 Populus trichocarpa HOM05D002996 ORTHO05D003536 1.5e-43 179.9 146 63.7
PSO407G0242 Papaver somniferum HOM05D002996 ORTHO05D003536 3.4e-43 178.7 126 69.8
Pp3c1_28480 Physcomitrium patens HOM05D002996 ORTHO05D003536 4.4e-43 178.3 126 69.0
Sabra04G0059100 Salix brachista HOM05D002996 ORTHO05D003536 9.9e-43 177.2 142 62.0
PSO170G1396 Papaver somniferum HOM05D002996 ORTHO05D003536 2.9e-42 175.6 126 69.8
PSO339G5742 Papaver somniferum HOM05D002996 ORTHO05D003536 1.1e-41 173.7 145 62.8
vmacro05507 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 5.4e-41 171.4 140 63.6
BcaC09g47743 Brassica carinata HOM05D002996 ORTHO05D003536 5.4e-33 144.8 102 67.6
arahy.Tifrunner.gnm1.ann1.RDL55E Arachis hypogaea HOM05D002996 ORTHO05D003536 6.0e-32 141.4 90 74.4
Peaxi162Scf00003g00013 Petunia axillaris HOM05D002996 ORTHO05D003536 1.0e-31 140.6 147 51.0
Migut.H00264 Erythranthe guttata HOM05D002996 ORTHO05D003536 3.0e-31 139.0 101 68.3
DCAR_010737 Daucus carota HOM05D002996 ORTHO05D003536 5.1e-31 138.3 126 58.7
Cre03.g180650 Chlamydomonas reinhardtii HOM05D002996 ORTHO05D003536 1.9e-30 136.3 139 53.2
Cfa025176 Carpinus fangiana HOM05D002996 ORTHO05D003536 1.1e-28 130.6 129 51.9
MCO10G011 Micromonas commoda HOM05D002996 ORTHO05D003536 2.9e-26 122.5 130 50.8
MBI16_g14303_MAGBIO Magnolia biondii HOM05D002996 ORTHO05D003536 7.1e-25 117.9 129 51.2
Cpa.g.c38250 Carica papaya HOM05D002996 ORTHO05D003536 5.1e-23 111.7 74 74.3
arahy.Tifrunner.gnm1.ann1.GD0F1M Arachis hypogaea HOM05D002996 ORTHO05D003536 3.7e-21 105.5 62 80.6
CsaV3_1G027790 Cucumis sativus L. HOM05D002996 ORTHO05D003536 1.5e-19 100.1 180 38.3
HanXRQChr09g0262281 Helianthus annuus HOM05D002996 ORTHO05D003536 6.5e-18 94.7 105 48.6
Lsat_1_v5_gn_2_24061 Lactuca sativa HOM05D002996 ORTHO05D003536 1.5e-14 83.6 73 54.8
COL.COLO4_15722 Corchorus olitorius HOM05D002996 ORTHO05D003536 1.3e-13 80.5 98 49.0
COL.COLO4_19895 Corchorus olitorius HOM05D002996 ORTHO05D003536 5.3e-12 75.1 42 85.7
Hma1.2p1_0969F.1_g242550 Hydrangea macrophylla HOM05D002996 ORTHO05D003536 2.5e-09 66.2 60 60.0
CsaV3_1G027800 Cucumis sativus L. HOM05D002996 ORTHO05D003536 1.4e-07 60.5 48 56.2
PSO407G0426 Papaver somniferum HOM05D002996 ORTHO05D003536 7.4e-06 54.7 43 65.1


User provided reference genes

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