Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 9.7e-86 320.1 159 100.0
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 5.6e-41 171.4 97 78.4
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 9.5e-41 170.6 97 81.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 2.1e-40 169.5 96 83.3
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.8e-40 169.1 100 76.0
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.6e-40 168.7 101 77.2
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 6.2e-40 167.9 97 77.3
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 8.1e-40 167.5 97 78.4
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.1e-40 167.5 97 78.4
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 8.1e-40 167.5 97 79.4
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 8.1e-40 167.5 97 78.4
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 1.1e-39 167.2 97 78.4
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.4e-39 166.8 97 78.4
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.4e-39 166.8 97 77.3
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.8e-39 166.4 97 77.3
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 2.3e-39 166.0 96 78.1
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 2.3e-39 166.0 99 78.8
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.3e-39 166.0 99 77.8
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 3.1e-39 165.6 98 77.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 3.1e-39 165.6 97 78.4
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.1e-39 165.6 97 79.4
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 3.1e-39 165.6 97 76.3
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 3.1e-39 165.6 94 79.8
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 4.0e-39 165.2 96 75.0
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 5.2e-39 164.9 97 77.3
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 5.2e-39 164.9 97 78.4
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 6.8e-39 164.5 95 82.1
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 6.8e-39 164.5 101 74.3
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 6.8e-39 164.5 97 78.4
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 8.9e-39 164.1 103 74.8
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 8.9e-39 164.1 98 78.6
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 8.9e-39 164.1 97 78.4
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 1.5e-38 163.3 97 77.3
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.5e-38 163.3 97 76.3
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 2.0e-38 162.9 95 78.9
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.0e-38 162.9 97 76.3
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 2.0e-38 162.9 98 78.6
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 2.0e-38 162.9 92 82.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 3.4e-38 162.2 97 79.4
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 3.4e-38 162.2 93 81.7
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 3.4e-38 162.2 97 77.3
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 3.4e-38 162.2 95 76.8
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 3.4e-38 162.2 95 76.8
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 4.4e-38 161.8 101 75.2
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 5.8e-38 161.4 100 76.0
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 5.8e-38 161.4 97 77.3
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 5.8e-38 161.4 103 74.8
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 7.5e-38 161.0 95 76.8
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 7.5e-38 161.0 97 77.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 7.5e-38 161.0 97 75.3
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 9.8e-38 160.6 96 77.1
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 9.8e-38 160.6 97 74.2
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 9.8e-38 160.6 97 74.2
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 9.8e-38 160.6 97 76.3
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 9.8e-38 160.6 97 77.3
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.7e-37 159.8 96 76.0
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 2.2e-37 159.5 97 75.3
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 2.2e-37 159.5 97 77.3
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.2e-37 159.5 97 76.3
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 2.2e-37 159.5 97 74.2
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 2.9e-37 159.1 97 73.2
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 4.9e-37 158.3 95 77.9
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 6.4e-37 157.9 102 73.5
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 6.4e-37 157.9 111 70.3
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 8.3e-37 157.5 97 77.3
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.4e-36 156.8 97 74.2
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 1.4e-36 156.8 94 76.6
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.9e-36 156.4 99 74.7
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 2.4e-36 156.0 99 73.7
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 3.2e-36 155.6 97 72.2
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.2e-36 155.6 97 72.2
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.1e-36 155.2 97 74.2
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 4.1e-36 155.2 97 73.2
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 5.4e-36 154.8 97 73.2
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 9.2e-36 154.1 97 72.2
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 9.2e-36 154.1 97 71.1
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 9.2e-36 154.1 97 74.2
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 2.7e-35 152.5 96 72.9
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 2.7e-35 152.5 96 72.9
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 4.6e-35 151.8 97 72.2
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 6.0e-35 151.4 94 73.4
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.3e-34 150.2 97 72.2
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.3e-34 150.2 86 80.2
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.7e-34 149.8 97 70.1
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.3e-34 149.4 93 74.2
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 2.3e-34 149.4 104 66.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 3.9e-34 148.7 99 71.7
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 5.1e-34 148.3 95 72.6
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.1e-34 148.3 98 75.5
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.9e-33 146.4 86 77.9
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 1.9e-33 146.4 96 71.9
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 3.3e-33 145.6 97 71.1
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.8e-32 142.5 104 66.3
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.6e-32 142.1 95 71.6
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.8e-31 139.8 103 68.0
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 5.2e-31 138.3 93 69.9
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 5.2e-31 138.3 95 67.4
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 2.4e-28 129.4 80 78.8
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 6.0e-27 124.8 96 63.5
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 6.6e-26 121.3 100 61.0
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.5e-25 119.4 104 58.7
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.3e-21 107.1 91 60.4
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.9e-21 105.9 91 59.3
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.4e-21 104.4 84 56.0
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 3.2e-20 102.4 72 68.1
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.1e-19 99.8 103 53.4
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 6.0e-19 98.2 118 47.5
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-17 93.6 88 50.0
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 1.3e-08 63.9 39 74.4


User provided reference genes

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