Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13536 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 2.3e-73 278.9 145 100.0
SEGI_01116 Sequoiadendron giganteum HOM05D005391 ORTHO05D006694 2.2e-36 156.0 90 86.7
ATR0171G017 Amborella trichopoda HOM05D005391 ORTHO05D006694 4.1e-14 82.0 84 56.0
CDE04G2377 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 4.1e-14 82.0 89 51.7
Nn3g16438 Nelumbo nucifera HOM05D005391 ORTHO05D006694 4.1e-14 82.0 100 46.0
SEGI_23930 Sequoiadendron giganteum HOM05D000005 ORTHO05D384483 5.3e-14 81.6 65 70.8
CDE10G0912 Ceratophyllum demersum HOM05D005391 ORTHO05D006694 1.5e-13 80.1 81 56.8
Lsat_1_v5_gn_4_81240 Lactuca sativa HOM05D005391 ORTHO05D006694 1.5e-13 80.1 118 40.7
PSO017G3900 Papaver somniferum HOM05D005391 ORTHO05D006694 2.0e-13 79.7 87 50.6
PSO478G3696 Papaver somniferum HOM05D005391 ORTHO05D006694 2.0e-13 79.7 87 50.6
Actinidia36818 Actinidia chinensis HOM05D005391 ORTHO05D006694 4.5e-13 78.6 102 45.1
Gohir.A07G050600 Gossypium hirsutum HOM05D005391 ORTHO05D006694 7.7e-13 77.8 113 43.4
MBI07_g28244_MAGBIO Magnolia biondii HOM05D005391 ORTHO05D006694 7.7e-13 77.8 144 38.9
Rhsim12G0176000 Rhododendron simsii HOM05D005391 ORTHO05D006694 1.0e-12 77.4 98 46.9
Peaxi162Scf00045g01932 Petunia axillaris HOM05D005391 ORTHO05D006694 1.3e-12 77.0 123 43.1
vmacro16727 Vaccinium macrocarpon HOM05D005391 ORTHO05D006694 1.3e-12 77.0 99 47.5
Potri.015G097800 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.7e-12 76.6 110 39.1
SEGI_16414 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.2e-12 76.3 55 72.7
HPP92_023119 Vanilla planifolia HOM05D005391 ORTHO05D006694 2.2e-12 76.3 129 40.3
ECA232G1626 Erigeron canadensis HOM05D005391 ORTHO05D006694 2.9e-12 75.9 139 35.3
Atru.chr6.1808 Acer truncatum HOM05D005391 ORTHO05D006694 3.8e-12 75.5 88 47.7
Gohir.D07G055100 Gossypium hirsutum HOM05D005391 ORTHO05D006694 3.8e-12 75.5 113 42.5
Gorai.001G058300 Gossypium raimondii HOM05D005391 ORTHO05D006694 3.8e-12 75.5 113 42.5
Lj5A95T81 Lonicera japonica HOM05D005391 ORTHO05D006694 3.8e-12 75.5 123 41.5
Hund08624 Selenicereus undatus HOM05D005391 ORTHO05D006694 3.8e-12 75.5 107 43.9
GSVIVG01008565001 Vitis vinifera HOM05D005391 ORTHO05D006694 3.8e-12 75.5 104 43.3
BraA09t36478Z Brassica rapa HOM05D005391 ORTHO05D006694 5.0e-12 75.1 119 37.0
Dinv23158 Davidia involucrata HOM05D005391 ORTHO05D006694 6.5e-12 74.7 109 42.2
TWI14G1436 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 6.5e-12 74.7 121 40.5
Actinidia08882 Actinidia chinensis HOM05D005391 ORTHO05D006694 8.5e-12 74.3 115 40.0
COL.COLO4_28143 Corchorus olitorius HOM05D005391 ORTHO05D006694 8.5e-12 74.3 116 43.1
FAN27G0224 Fragaria x ananassa HOM05D005391 ORTHO05D006694 8.5e-12 74.3 109 39.4
Nn4g22289 Nelumbo nucifera HOM05D005391 ORTHO05D006694 8.5e-12 74.3 107 43.9
CSS0010891 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.1e-11 73.9 103 41.7
FAN26G2573 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.1e-11 73.9 95 43.2
CSS0043065 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 1.4e-11 73.6 105 41.0
Psat5g051960 Pisum sativum HOM05D005391 ORTHO05D006694 1.4e-11 73.6 96 40.6
Potri.012G099200 Populus trichocarpa HOM05D005391 ORTHO05D006694 1.4e-11 73.6 137 36.5
TWI23G0649 Tripterygium wilfordii HOM05D005391 ORTHO05D006694 1.4e-11 73.6 154 36.4
Sabra15G0118500 Salix brachista HOM05D005391 ORTHO05D006694 1.9e-11 73.2 110 40.9
A09p08280 Brassica napus HOM05D005391 ORTHO05D006694 2.5e-11 72.8 119 33.6
Duzib205G0229 Durio zibethinus HOM05D005391 ORTHO05D006694 2.5e-11 72.8 121 39.7
CARHR277330 Cardamine hirsuta HOM05D005391 ORTHO05D006694 4.2e-11 72.0 98 42.9
Thecc.03G130500 Theobroma cacao HOM05D005391 ORTHO05D006694 4.2e-11 72.0 115 40.9
TAR629G0488 Trochodendron aralioides HOM05D005391 ORTHO05D006694 4.2e-11 72.0 113 39.8
Ah.07g204620 Amaranthus hybridus HOM05D005391 ORTHO05D006694 5.5e-11 71.6 113 41.6
CiPaw.12G044000 Carya illinoinensis HOM05D005391 ORTHO05D006694 5.5e-11 71.6 126 35.7
FAN15G0439 Fragaria x ananassa HOM05D005391 ORTHO05D006694 7.2e-11 71.2 137 35.8
EL10Ac6g15093 Beta vulgaris HOM05D005391 ORTHO05D006694 9.4e-11 70.9 125 40.8
MD08G1006700 Malus domestica HOM05D005391 ORTHO05D006694 1.2e-10 70.5 130 38.5
Mapoly0007s0225 Marchantia polymorpha HOM05D005391 ORTHO05D006694 1.2e-10 70.5 77 48.1
Aqoxy3G01572 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 1.6e-10 70.1 138 37.0
FAN20G0870 Fragaria x ananassa HOM05D005391 ORTHO05D006694 1.6e-10 70.1 137 35.8
Prupe.1G358600 Prunus persica HOM05D005391 ORTHO05D006694 1.6e-10 70.1 117 39.3
CSS0003205 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.1e-10 69.7 157 32.5
CSS0033680 Camellia sinensis var. sinensis HOM05D005391 ORTHO05D006694 2.1e-10 69.7 157 32.5
FAN23G2258 Fragaria x ananassa HOM05D005391 ORTHO05D006694 2.1e-10 69.7 124 38.7
Nitab4.5_0000264g0120 Nicotiana tabacum HOM05D005391 ORTHO05D006694 2.1e-10 69.7 166 31.3
Ah.03g143420 Amaranthus hybridus HOM05D005391 ORTHO05D006694 2.7e-10 69.3 113 40.7
Carub.0008s2418 Capsella rubella HOM05D005391 ORTHO05D006694 2.7e-10 69.3 103 37.9
MD15G1005900 Malus domestica HOM05D005391 ORTHO05D006694 2.7e-10 69.3 133 36.8
Sc04g0000550 Simmondsia chinensis HOM05D005391 ORTHO05D006694 2.7e-10 69.3 129 39.5
A06p30110 Brassica napus HOM05D005391 ORTHO05D006694 3.6e-10 68.9 101 38.6
BraA06t25962Z Brassica rapa HOM05D005391 ORTHO05D006694 3.6e-10 68.9 101 38.6
CANSAT80G1472 Cannabis sativa HOM05D005391 ORTHO05D006694 3.6e-10 68.9 123 37.4
Cpa.g.sc13.100 Carica papaya HOM05D005391 ORTHO05D006694 3.6e-10 68.9 108 40.7
CiPaw.11G006200 Carya illinoinensis HOM05D005391 ORTHO05D006694 3.6e-10 68.9 109 38.5
FvH4_2g37750 Fragaria vesca HOM05D005391 ORTHO05D006694 3.6e-10 68.9 140 32.9
AUR62003784 Chenopodium quinoa HOM05D005391 ORTHO05D006694 4.6e-10 68.6 160 38.1
Lj1g0005006 Lotus japonicus HOM05D005391 ORTHO05D006694 4.6e-10 68.6 103 39.8
VMungo1309G0665 Vigna mungo HOM05D005391 ORTHO05D006694 4.6e-10 68.6 110 39.1
AL8G40540 Arabidopsis lyrata HOM05D005391 ORTHO05D006694 6.1e-10 68.2 108 38.9
Thhalv10004987m.g Eutrema salsugineum HOM05D005391 ORTHO05D006694 6.1e-10 68.2 155 35.5
AUR62002017 Chenopodium quinoa HOM05D005391 ORTHO05D006694 7.9e-10 67.8 160 37.5
TAR371G0831 Trochodendron aralioides HOM05D005391 ORTHO05D006694 7.9e-10 67.8 90 43.3
Ciclev10032864m.g Citrus clementina HOM05D005391 ORTHO05D006694 1.4e-09 67.0 158 33.5
Migut.E01449 Erythranthe guttata HOM05D005391 ORTHO05D006694 1.4e-09 67.0 123 35.0
PGSC0003DMG400026284 Solanum tuberosum HOM05D005391 ORTHO05D006694 1.4e-09 67.0 173 32.4
Zm00001eb085410 Zea mays HOM05D005391 ORTHO05D006694 2.3e-09 66.2 103 39.8
RcHm_v2.0_Chr6g0303761 Rosa chinensis HOM05D005391 ORTHO05D006694 3.0e-09 65.9 119 37.0
Aa31LG1G18560 Aethionema arabicum HOM05D005391 ORTHO05D006694 3.9e-09 65.5 109 36.7
Zm00001eb421130 Zea mays HOM05D005391 ORTHO05D006694 3.9e-09 65.5 97 41.2
Ca_16053_v3 Cicer arietinum L. HOM05D005391 ORTHO05D006694 5.1e-09 65.1 100 37.0
Glyma.04G196600 Glycine max HOM05D005391 ORTHO05D006694 5.1e-09 65.1 105 40.0
Sed0002904 Sechium edule HOM05D005391 ORTHO05D006694 6.7e-09 64.7 116 38.8
SGA_v2.0_scaffold169G38603 Striga asiatica HOM05D005391 ORTHO05D006694 6.7e-09 64.7 157 32.5
Sp2g26560 Schrenkiella parvula HOM05D005391 ORTHO05D006694 8.8e-09 64.3 128 32.8
C03p62960 Brassica napus HOM05D005391 ORTHO05D006694 1.5e-08 63.5 137 32.1
Glyma.06G169200 Glycine max HOM05D005391 ORTHO05D006694 1.5e-08 63.5 105 36.2
Manes.14G050400 Manihot esculenta HOM05D005391 ORTHO05D006694 1.5e-08 63.5 165 32.7
Medtr3g099130 Medicago truncatula HOM05D005391 ORTHO05D006694 1.5e-08 63.5 119 37.0
Sabra12G0072400 Salix brachista HOM05D005391 ORTHO05D006694 1.5e-08 63.5 141 33.3
THA.LOC104798944 Tarenaya hassleriana HOM05D005391 ORTHO05D006694 1.5e-08 63.5 102 38.2
BolC3t18550H Brassica oleracea HOM05D005391 ORTHO05D006694 2.0e-08 63.2 137 32.1
Cc08_g07550 Coffea canephora HOM05D005391 ORTHO05D006694 2.0e-08 63.2 136 35.3
SEGI_10253 Sequoiadendron giganteum HOM05D000106 ORTHO05D011406 2.0e-08 63.2 55 63.6
SEGI_12675 Sequoiadendron giganteum HOM05D000005 ORTHO05D000239 2.0e-08 63.2 58 60.3
BcaB02g09758 Brassica carinata HOM05D005391 ORTHO05D006694 2.5e-08 62.8 138 32.6
Solyc08g006670.3 Solanum lycopersicum HOM05D005391 ORTHO05D006694 2.5e-08 62.8 173 31.2
Sopen08g002620 Solanum pennellii HOM05D005391 ORTHO05D006694 2.5e-08 62.8 173 31.2
Aqoxy3G00618 Aquilegia oxysepala HOM05D005391 ORTHO05D006694 3.3e-08 62.4 107 37.4
BcaC04g23332 Brassica carinata HOM05D005391 ORTHO05D006694 3.3e-08 62.4 98 35.7
C09p09360 Brassica napus HOM05D005391 ORTHO05D006694 3.3e-08 62.4 98 35.7
Phvul.009G165600 Phaseolus vulgaris HOM05D005391 ORTHO05D006694 3.3e-08 62.4 142 33.1
DCAR_016386 Daucus carota HOM05D005391 ORTHO05D006694 4.3e-08 62.0 118 36.4
Lalb_Chr23g0273681 Lupinus albus HOM05D005391 ORTHO05D006694 5.7e-08 61.6 103 35.0
Nitab4.5_0001362g0010 Nicotiana tabacum HOM05D005391 ORTHO05D006694 5.7e-08 61.6 49 59.2
unitig_32.g10935 Utricularia gibba HOM05D005391 ORTHO05D006694 9.7e-08 60.8 143 31.5
BcaB04g19920 Brassica carinata HOM05D005391 ORTHO05D006694 1.3e-07 60.5 120 30.8
Oeu009657.1 Olea europaea HOM05D005391 ORTHO05D006694 2.8e-07 59.3 177 30.5
Os04g0388601 Oryza sativa ssp. japonica HOM05D005391 ORTHO05D006694 4.8e-07 58.5 43 60.5
BolC9t53848H Brassica oleracea HOM05D005391 ORTHO05D006694 6.3e-07 58.2 117 29.9
TPR.G14215 Trifolium pratense HOM05D005391 ORTHO05D006694 6.3e-07 58.2 111 35.1
AT5G63480 Arabidopsis thaliana HOM05D005391 ORTHO05D006694 1.4e-06 57.0 104 33.7
arahy.Tifrunner.gnm1.ann1.CP8X4X Arachis hypogaea HOM05D005391 ORTHO05D006694 1.4e-06 57.0 120 31.7
arahy.Tifrunner.gnm1.ann1.HT4698 Arachis hypogaea HOM05D005391 ORTHO05D006694 1.4e-06 57.0 120 31.7
arahy.Tifrunner.gnm1.ann1.S11VKX Arachis hypogaea HOM05D005391 ORTHO05D006694 1.4e-06 57.0 120 31.7
MELO3C026202.2 Cucumis melo HOM05D005391 ORTHO05D006694 1.8e-06 56.6 111 32.4
SEGI_21172 Sequoiadendron giganteum HOM05D011039 ORTHO05D014261 1.8e-06 56.6 54 59.3
SEGI_39502 Sequoiadendron giganteum HOM05D000342 ORTHO05D000217 2.4e-06 56.2 55 52.7
arahy.Tifrunner.gnm1.ann1.3A01UJ Arachis hypogaea HOM05D005391 ORTHO05D006694 3.1e-06 55.8 143 29.4
Cfa018784 Carpinus fangiana HOM05D005391 ORTHO05D006694 3.1e-06 55.8 38 63.2
AagrBONN_evm.TU.Sc2ySwM_369.268 Anthoceros agrestis HOM05D005391 ORTHO05D006694 5.3e-06 55.1 85 40.0
CsaV3_1G000500 Cucumis sativus L. HOM05D005391 ORTHO05D006694 6.9e-06 54.7 124 33.1
QL10p002677 Quercus lobata HOM05D005391 ORTHO05D006694 6.9e-06 54.7 103 34.0


User provided reference genes

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