Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13516 Sequoiadendron giganteum HOM05D004182 ORTHO05D007321 7.3e-71 270.4 131 100.0
SEGI_31611 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 9.9e-44 180.3 85 100.0
SEGI_24666 Sequoiadendron giganteum HOM05D001966 ORTHO05D011119 1.6e-41 172.9 85 96.5
Sopen02g009080 Solanum pennellii HOM05D004182 ORTHO05D007321 3.1e-29 132.1 66 92.4
VMungo0720G0997 Vigna mungo HOM05D004182 ORTHO05D007321 6.4e-27 124.4 112 62.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 2.1e-25 119.4 150 53.3
Ca_24280_v3 Cicer arietinum L. HOM05D004182 ORTHO05D007321 2.7e-25 119.0 94 69.1
BraSC143t45651Z Brassica rapa HOM05D004182 ORTHO05D007321 1.8e-24 116.3 114 58.8
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.2e-18 95.1 80 62.5
SEGI_06057 Sequoiadendron giganteum HOM05D033036 ORTHO05D036140 1.6e-17 93.2 44 100.0
arahy.Tifrunner.gnm1.ann1.71HDHZ Arachis hypogaea HOM05D001966 ORTHO05D010127 2.7e-17 92.4 102 53.9
BolSC35t60712H Brassica oleracea HOM05D004182 ORTHO05D007321 3.5e-17 92.0 112 52.7
BolSC29t60554H Brassica oleracea HOM05D004182 ORTHO05D007321 4.6e-17 91.7 112 51.8
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 6.0e-17 91.3 67 70.1
C09p40270 Brassica napus HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC29t60540H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC35t60684H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC44t60830H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC45t60917H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC46t60966H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BolSC49t61134H Brassica oleracea HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC103t45421Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC138t45528Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC25t45918Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC58t46465Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC59t46534Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
BraSC59t46543Z Brassica rapa HOM05D004182 ORTHO05D007321 6.0e-17 91.3 67 70.1
CSS0013534 Camellia sinensis var. sinensis HOM05D000388 ORTHO05D009843 2.3e-16 89.4 42 95.2
BolSC49t61151H Brassica oleracea HOM05D004182 ORTHO05D007321 8.7e-16 87.4 65 69.2
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.5e-15 86.7 67 68.7
Oeu059001.1 Olea europaea HOM05D000540 ORTHO05D000681 2.1e-14 82.8 77 58.4
A08p09050 Brassica napus HOM05D001966 ORTHO05D010127 3.7e-14 82.0 72 63.9
arahy.Tifrunner.gnm1.ann1.0KS2YP Arachis hypogaea HOM05D004182 ORTHO05D007321 1.8e-13 79.7 66 63.6
Sopen09g027020 Solanum pennellii HOM05D001966 ORTHO05D011119 1.5e-12 76.6 67 61.2
VMungo0942G0003 Vigna mungo HOM05D004182 ORTHO05D007321 1.0e-11 73.9 83 53.0
EL10As15g24133 Beta vulgaris HOM05D004182 ORTHO05D007321 3.8e-11 72.0 34 94.1
Oeu012768.1 Olea europaea HOM05D007952 ORTHO05D009823 4.6e-09 65.1 53 66.0
VMungo1080G1108 Vigna mungo HOM05D004182 ORTHO05D007321 6.1e-09 64.7 38 81.6
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.0e-08 63.9 33 87.9
Sc09g0006250 Simmondsia chinensis HOM05D002578 ORTHO05D005154 1.3e-08 63.5 33 87.9
FAN26G2239 Fragaria x ananassa HOM05D004182 ORTHO05D010449 8.7e-08 60.8 32 84.4
Gohir.A06G123204 Gossypium hirsutum HOM05D001966 ORTHO05D010127 3.3e-07 58.9 40 72.5
Gohir.1Z050082 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.3e-07 58.5 41 73.2
Gohir.A04G039225 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.3e-07 58.5 41 73.2
Sopen02g002730 Solanum pennellii HOM05D004182 ORTHO05D007321 5.7e-07 58.2 113 38.9
Actinidia01802 Actinidia chinensis HOM05D024403 ORTHO05D007321 9.7e-07 57.4 38 68.4
Gohir.A01G139755 Gossypium hirsutum HOM05D001966 ORTHO05D010127 1.6e-06 56.6 41 70.7
Gohir.D11G140550 Gossypium hirsutum HOM05D001966 ORTHO05D010127 4.8e-06 55.1 42 69.0
BolSC29t60624H Brassica oleracea HOM05D004182 ORTHO05D007321 8.2e-06 54.3 55 54.5


User provided reference genes

Program Settings