Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 1.7e-64 249.2 126 100.0
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 3.3e-44 181.8 115 76.5
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 9.5e-44 180.3 115 75.7
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 9.5e-44 180.3 115 74.8
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 1.2e-43 179.9 115 73.9
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 1.2e-43 179.9 115 75.7
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 1.6e-43 179.5 115 76.5
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 2.1e-43 179.1 115 77.4
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 2.1e-43 179.1 115 75.7
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 2.8e-43 178.7 115 73.9
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 3.6e-43 178.3 115 75.7
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 4.7e-43 177.9 115 74.8
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 4.7e-43 177.9 115 75.7
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 8.1e-43 177.2 115 73.0
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 8.1e-43 177.2 115 75.7
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 1.1e-42 176.8 115 75.7
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 1.1e-42 176.8 115 73.9
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 1.4e-42 176.4 115 73.0
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 1.4e-42 176.4 115 74.8
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 1.4e-42 176.4 115 75.7
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.4e-42 176.4 115 73.9
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 1.8e-42 176.0 115 71.3
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 1.8e-42 176.0 115 74.8
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 1.8e-42 176.0 115 72.2
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 2.3e-42 175.6 115 73.9
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 2.3e-42 175.6 115 73.0
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 2.3e-42 175.6 115 73.0
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 2.3e-42 175.6 115 73.9
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 3.1e-42 175.3 115 74.8
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 4.0e-42 174.9 115 72.2
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 4.0e-42 174.9 115 73.9
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 4.0e-42 174.9 114 76.3
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 5.2e-42 174.5 115 72.2
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 5.2e-42 174.5 115 73.9
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 5.2e-42 174.5 115 71.3
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 73.9
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 73.9
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 72.2
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 73.9
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 73.9
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 6.8e-42 174.1 115 73.9
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 8.9e-42 173.7 115 73.0
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 8.9e-42 173.7 115 72.2
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 8.9e-42 173.7 115 73.0
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 8.9e-42 173.7 115 74.8
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 73.0
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 70.4
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 70.4
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 70.4
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 70.4
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 73.0
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 73.0
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 74.8
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 1.2e-41 173.3 115 73.0
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-41 172.9 115 73.0
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 1.5e-41 172.9 115 73.0
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 2.6e-41 172.2 111 76.6
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 2.6e-41 172.2 115 72.2
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 3.4e-41 171.8 115 72.2
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 3.4e-41 171.8 115 73.0
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 3.4e-41 171.8 115 72.2
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 4.4e-41 171.4 115 72.2
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 5.8e-41 171.0 115 73.0
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 7.5e-41 170.6 115 72.2
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 7.5e-41 170.6 115 72.2
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 7.5e-41 170.6 112 72.3
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 7.5e-41 170.6 115 72.2
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 9.8e-41 170.2 112 71.4
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 9.8e-41 170.2 115 72.2
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 1.3e-40 169.9 115 72.2
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 1.3e-40 169.9 112 75.0
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 1.7e-40 169.5 115 73.0
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 1.7e-40 169.5 111 75.7
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.2e-40 169.1 112 71.4
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 2.2e-40 169.1 115 70.4
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 3.7e-40 168.3 115 72.2
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 4.9e-40 167.9 115 72.2
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 6.4e-40 167.5 115 72.2
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 8.3e-40 167.2 115 70.4
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 8.3e-40 167.2 115 70.4
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 8.3e-40 167.2 111 73.0
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 8.3e-40 167.2 110 75.5
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 1.1e-39 166.8 115 68.7
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 1.4e-39 166.4 115 71.3
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 1.4e-39 166.4 115 71.3
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 1.9e-39 166.0 115 70.4
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 1.9e-39 166.0 98 80.6
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 1.9e-39 166.0 117 69.2
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 2.4e-39 165.6 115 71.3
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 3.2e-39 165.2 116 71.6
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 5.4e-39 164.5 112 72.3
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 7.1e-39 164.1 137 60.6
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 9.2e-39 163.7 115 70.4
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 1.2e-38 163.3 111 71.2
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 3.5e-38 161.8 110 74.5
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 6.0e-38 161.0 112 71.4
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 1.5e-36 156.4 108 74.1
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 1.9e-36 156.0 118 68.6
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 2.9e-32 142.1 85 84.7
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 1.4e-31 139.8 98 64.3
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 5.1e-29 131.3 115 59.1
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 9.9e-25 117.1 101 58.4
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 8.4e-24 114.0 112 55.4
SEGI_24798 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 5.4e-23 111.3 62 91.9
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 9.3e-23 110.5 91 63.7
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 4.6e-22 108.2 108 52.8
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 6.6e-21 104.4 94 53.2
Actinidia21044 Actinidia chinensis HOM05D005743 ORTHO05D007031 2.8e-19 99.0 80 58.8
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 1.8e-18 96.3 78 59.0
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 9.0e-18 94.0 116 43.1
CBR_g22437 Chara braunii HOM05D005743 ORTHO05D007031 1.2e-17 93.6 98 49.0
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 1.2e-17 93.6 88 55.7
ATR0706G260 Amborella trichopoda HOM05D005743 ORTHO05D007031 2.0e-17 92.8 57 82.5
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 2.9e-16 89.0 47 95.7
EL10Ac3g06395 Beta vulgaris HOM05D005743 ORTHO05D007031 6.4e-16 87.8 60 73.3
PRCOL_00004461 Prasinoderma coloniale HOM05D005743 ORTHO05D007031 6.0e-14 81.3 98 45.9
Cre11.g479600 Chlamydomonas reinhardtii HOM05D005743 ORTHO05D007031 9.0e-10 67.4 105 36.2
Medtr7g112660 Medicago truncatula HOM05D005743 ORTHO05D007031 2.0e-09 66.2 50 72.0
Medtr3g062620 Medicago truncatula HOM05D005743 ORTHO05D007031 3.2e-07 58.9 38 78.9


User provided reference genes

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