Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13502 Sequoiadendron giganteum HOM05D005459 ORTHO05D006751 5.8e-172 607.4 301 100.0
MBI06_g32757_MAGBIO Magnolia biondii HOM05D005459 ORTHO05D006751 5.4e-45 185.7 209 49.8
ATR0661G386 Amborella trichopoda HOM05D005459 ORTHO05D006751 1.1e-40 171.4 212 47.2
TAR629G0715 Trochodendron aralioides HOM05D005459 ORTHO05D006751 6.8e-40 168.7 209 45.9
COL.COLO4_35657 Corchorus olitorius HOM05D005459 ORTHO05D006751 2.0e-39 167.2 210 44.3
Os12g0623800 Oryza sativa ssp. japonica HOM05D005459 ORTHO05D006751 5.8e-39 165.6 213 44.6
Lalb_Chr10g0091331 Lupinus albus HOM05D005459 ORTHO05D006751 2.9e-38 163.3 205 42.9
Ciclev10007115m.g Citrus clementina HOM05D005459 ORTHO05D006751 4.9e-38 162.5 210 44.8
PSO384G0956 Papaver somniferum HOM05D005459 ORTHO05D006751 6.4e-38 162.2 211 44.1
Medtr1g028510 Medicago truncatula HOM05D005459 ORTHO05D006751 4.2e-37 159.5 212 43.4
Cpa.g.sc3.50 Carica papaya HOM05D005459 ORTHO05D006751 5.4e-37 159.1 210 43.8
TWI39G1077 Tripterygium wilfordii HOM05D005459 ORTHO05D006751 5.4e-37 159.1 209 44.0
Nn3g17990 Nelumbo nucifera HOM05D005459 ORTHO05D006751 7.1e-37 158.7 212 42.5
arahy.Tifrunner.gnm1.ann1.7I62GA Arachis hypogaea HOM05D005459 ORTHO05D006751 9.2e-37 158.3 209 42.6
arahy.Tifrunner.gnm1.ann1.QW5IMS Arachis hypogaea HOM05D005459 ORTHO05D006751 9.2e-37 158.3 209 42.1
THA.LOC104813180 Tarenaya hassleriana HOM05D005459 ORTHO05D006751 9.2e-37 158.3 209 42.6
Lj6g0006101 Lotus japonicus HOM05D005459 ORTHO05D006751 2.1e-36 157.1 209 41.6
TPR.G33293 Trifolium pratense HOM05D005459 ORTHO05D006751 3.5e-36 156.4 210 42.4
Dinv28337 Davidia involucrata HOM05D005459 ORTHO05D006751 4.6e-36 156.0 208 43.3
Potri.015G022400 Populus trichocarpa HOM05D005459 ORTHO05D006751 6.0e-36 155.6 209 42.6
Thecc.03G192700 Theobroma cacao HOM05D005459 ORTHO05D006751 7.8e-36 155.2 214 44.4
FvH4_7g31010 Fragaria vesca HOM05D005459 ORTHO05D006751 1.3e-35 154.5 208 43.3
FAN06G0889 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.3e-35 154.5 208 43.3
FAN06G3802 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.3e-35 154.5 208 43.3
Zm00001eb410070 Zea mays HOM05D005459 ORTHO05D006751 1.3e-35 154.5 214 42.1
VMungo0647G0840 Vigna mungo HOM05D005459 ORTHO05D006751 2.3e-35 153.7 207 40.6
PSO135G0062 Papaver somniferum HOM05D005459 ORTHO05D006751 6.6e-35 152.1 209 43.1
vmacro10106 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 6.6e-35 152.1 276 36.2
GSVIVG01028720001 Vitis vinifera HOM05D005459 ORTHO05D006751 6.6e-35 152.1 210 42.9
Cfa016362 Carpinus fangiana HOM05D005459 ORTHO05D006751 8.7e-35 151.8 206 44.7
MD07G1285000 Malus domestica HOM05D005459 ORTHO05D006751 8.7e-35 151.8 212 41.0
Haze_00111 Corylus avellana HOM05D005459 ORTHO05D006751 1.1e-34 151.4 207 44.0
Duzib084G0355 Durio zibethinus HOM05D005459 ORTHO05D006751 1.1e-34 151.4 209 42.1
Peaxi162Scf00618g00514 Petunia axillaris HOM05D005459 ORTHO05D006751 1.1e-34 151.4 211 40.8
Gohir.D12G253700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 1.5e-34 151.0 209 41.6
Sed0000581 Sechium edule HOM05D005459 ORTHO05D006751 2.5e-34 150.2 210 40.0
Aqoxy7G00148 Aquilegia oxysepala HOM05D005459 ORTHO05D006751 3.3e-34 149.8 207 42.0
Gorai.008G270800 Gossypium raimondii HOM05D005459 ORTHO05D006751 4.3e-34 149.4 209 41.1
Lj3C911T3 Lonicera japonica HOM05D005459 ORTHO05D006751 5.6e-34 149.1 211 41.7
Gohir.D12G252700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 7.3e-34 148.7 209 41.1
RcHm_v2.0_Chr1g0380091 Rosa chinensis HOM05D005459 ORTHO05D006751 7.3e-34 148.7 293 35.5
Hma1.2p1_0327F.1_g126730 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 1.2e-33 147.9 205 39.0
CANSAT64G0927 Cannabis sativa HOM05D005459 ORTHO05D006751 2.1e-33 147.1 211 39.3
HanXRQChr14g0462841 Helianthus annuus HOM05D005459 ORTHO05D006751 2.8e-33 146.7 205 42.9
PGR142G2821 Punica granatum HOM05D005459 ORTHO05D006751 3.6e-33 146.4 207 39.6
FAN10G1104 Fragaria x ananassa HOM05D005459 ORTHO05D006751 4.7e-33 146.0 210 41.4
FAN10G1158 Fragaria x ananassa HOM05D005459 ORTHO05D006751 4.7e-33 146.0 210 41.4
Manes.06G157100 Manihot esculenta HOM05D005459 ORTHO05D006751 6.2e-33 145.6 210 41.0
Psat6g038640 Pisum sativum HOM05D005459 ORTHO05D006751 8.1e-33 145.2 210 39.0
BcaC06g31482 Brassica carinata HOM05D005459 ORTHO05D006751 1.1e-32 144.8 209 41.6
Glyma.10G065800 Glycine max HOM05D005459 ORTHO05D006751 1.1e-32 144.8 207 40.1
FAN01G1429 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.4e-32 144.4 210 41.0
Eucgr.K00329 Eucalyptus grandis HOM05D005459 ORTHO05D006751 1.8e-32 144.1 207 40.1
Mapoly0084s0006 Marchantia polymorpha HOM05D005459 ORTHO05D006751 4.0e-32 142.9 201 42.8
Solyc06g051900.3 Solanum lycopersicum HOM05D005459 ORTHO05D006751 5.3e-32 142.5 211 39.8
Sopen06g017930 Solanum pennellii HOM05D005459 ORTHO05D006751 9.0e-32 141.7 211 39.8
Thhalv10027718m.g Eutrema salsugineum HOM05D005459 ORTHO05D006751 1.2e-31 141.4 209 41.6
AT5G41480 Arabidopsis thaliana HOM05D005459 ORTHO05D006751 1.5e-31 141.0 206 41.7
Cc02_g01880 Coffea canephora HOM05D005459 ORTHO05D006751 1.5e-31 141.0 206 39.3
Nitab4.5_0004934g0010 Nicotiana tabacum HOM05D005459 ORTHO05D006751 2.0e-31 140.6 211 39.3
Rhsim09G0203700 Rhododendron simsii HOM05D005459 ORTHO05D006751 2.0e-31 140.6 211 39.3
SHI02435 Sapria himalayana HOM05D005459 ORTHO05D006751 2.0e-31 140.6 208 39.9
Sp7g00510 Schrenkiella parvula HOM05D005459 ORTHO05D006751 4.4e-31 139.4 209 40.7
Migut.F01051 Erythranthe guttata HOM05D005459 ORTHO05D006751 5.8e-31 139.0 212 40.1
Prupe.2G307100 Prunus persica HOM05D005459 ORTHO05D006751 5.8e-31 139.0 210 38.6
C07p29540 Brassica napus HOM05D005459 ORTHO05D006751 7.6e-31 138.7 209 40.7
CiPaw.06G007500 Carya illinoinensis HOM05D005459 ORTHO05D006751 7.6e-31 138.7 125 55.2
Lsat_1_v5_gn_2_134221 Lactuca sativa HOM05D005459 ORTHO05D006751 7.6e-31 138.7 211 38.9
QL09p010988 Quercus lobata HOM05D005459 ORTHO05D006751 9.9e-31 138.3 211 41.2
SalBow2G0671 Salvia bowleyana HOM05D005459 ORTHO05D006751 9.9e-31 138.3 208 38.9
PGSC0003DMG400002352 Solanum tuberosum HOM05D005459 ORTHO05D006751 9.9e-31 138.3 214 40.2
unitig_578.g16671 Utricularia gibba HOM05D005459 ORTHO05D006751 9.9e-31 138.3 208 37.5
CSS0021725 Camellia sinensis var. sinensis HOM05D005459 ORTHO05D006751 1.7e-30 137.5 218 40.8
BolC7t43505H Brassica oleracea HOM05D005459 ORTHO05D006751 2.2e-30 137.1 210 41.0
CDE02G4072 Ceratophyllum demersum HOM05D005459 ORTHO05D006751 2.2e-30 137.1 208 38.5
DCAR_024416 Daucus carota HOM05D005459 ORTHO05D006751 2.9e-30 136.7 214 36.9
CAN.G589.10 Capsicum annuum HOM05D005459 ORTHO05D006751 4.9e-30 136.0 211 38.4
Atru.chr1.246 Acer truncatum HOM05D005459 ORTHO05D006751 8.4e-30 135.2 125 53.6
AL7G47930 Arabidopsis lyrata HOM05D005459 ORTHO05D006751 8.4e-30 135.2 209 39.7
Hma1.2p1_0327F.1_g126720 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 1.1e-29 134.8 133 48.9
Sc13g0009600 Simmondsia chinensis HOM05D005459 ORTHO05D006751 1.1e-29 134.8 208 37.5
Carub.0007s3402 Capsella rubella HOM05D005459 ORTHO05D006751 1.4e-29 134.4 210 39.0
A06p46000 Brassica napus HOM05D005459 ORTHO05D006751 1.9e-29 134.0 210 40.0
BraA06t27464Z Brassica rapa HOM05D005459 ORTHO05D006751 1.9e-29 134.0 210 40.0
CAN.G394.13 Capsicum annuum HOM05D005459 ORTHO05D006751 2.4e-29 133.7 208 38.5
HPP92_026772 Vanilla planifolia HOM05D005459 ORTHO05D006751 5.4e-29 132.5 211 37.0
Aa31LG9G520 Aethionema arabicum HOM05D005459 ORTHO05D006751 7.1e-29 132.1 212 39.6
CsaV3_3G021950 Cucumis sativus L. HOM05D005459 ORTHO05D006751 7.1e-29 132.1 206 39.3
AUR62006152 Chenopodium quinoa HOM05D005459 ORTHO05D006751 7.8e-28 128.6 235 34.9
FAN03G0338 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.3e-27 127.9 208 40.4
AUR62019336 Chenopodium quinoa HOM05D005459 ORTHO05D006751 1.7e-27 127.5 248 33.5
EL10Ac3g05347 Beta vulgaris HOM05D005459 ORTHO05D006751 3.0e-27 126.7 207 37.7
ECA246G1562 Erigeron canadensis HOM05D005459 ORTHO05D006751 6.6e-27 125.6 121 52.9
Hund04829 Selenicereus undatus HOM05D005459 ORTHO05D006751 3.3e-26 123.2 230 35.7
Pp3c1_19310 Physcomitrium patens HOM05D005459 ORTHO05D006751 4.3e-26 122.9 226 37.6
ClCG05G008710 Citrullus lanatus HOM05D005459 ORTHO05D006751 1.3e-25 121.3 244 33.6
SGA_v2.0_scaffold55G19735 Striga asiatica HOM05D005459 ORTHO05D006751 1.3e-25 121.3 207 36.7
CARHR213570 Cardamine hirsuta HOM05D005459 ORTHO05D006751 8.1e-25 118.6 104 54.8
SMO118G0218 Selaginella moellendorffii HOM05D005459 ORTHO05D006751 3.1e-24 116.7 205 34.1
Actinidia03157 Actinidia chinensis HOM05D005459 ORTHO05D006751 1.7e-22 110.9 89 59.6
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 1.4e-21 107.8 121 43.8
Dinv35306 Davidia involucrata HOM05D005459 ORTHO05D006751 3.5e-20 103.2 77 63.6
AagrBONN_evm.TU.Sc2ySwM_117.3837 Anthoceros agrestis HOM05D005459 ORTHO05D006751 1.3e-19 101.3 112 47.3
Ca_12679_v3 Cicer arietinum L. HOM05D005459 ORTHO05D006751 1.6e-17 94.4 166 37.3
Sabra15G0016700 Salix brachista HOM05D005459 ORTHO05D006751 1.8e-16 90.9 163 35.6
Gohir.A12G251800 Gossypium hirsutum HOM05D005459 ORTHO05D006751 4.9e-14 82.8 60 66.7
Medtr7g100937 Medicago truncatula HOM05D005459 ORTHO05D006751 1.4e-13 81.3 153 35.3
Ah.13g069840 Amaranthus hybridus HOM05D005459 ORTHO05D006751 9.3e-13 78.6 165 32.1
Glyma.14G160851 Glycine max HOM05D005459 ORTHO05D006751 2.1e-12 77.4 151 33.8
Phvul.001G060700 Phaseolus vulgaris HOM05D005459 ORTHO05D006751 2.1e-12 77.4 207 28.5
CARHR289170 Cardamine hirsuta HOM05D005459 ORTHO05D006751 1.9e-10 70.9 58 56.9
Hma1.2p1_1655F.1_g295920 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 6.2e-09 65.9 53 56.6
MELO3C026934.2 Cucumis melo HOM05D005459 ORTHO05D006751 4.5e-07 59.7 44 59.1
Ah.13g069860 Amaranthus hybridus HOM05D005459 ORTHO05D006751 1.3e-06 58.2 44 56.8
vmacro20553 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 2.2e-06 57.4 90 37.8
Cre03.g176800 Chlamydomonas reinhardtii HOM05D005459 ORTHO05D006751 2.9e-06 57.0 172 27.3


User provided reference genes

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