Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13417 Sequoiadendron giganteum HOM05D006313 ORTHO05D007853 3.1e-55 218.0 95 100.0
Sopen04g036010 Solanum pennellii HOM05D006313 ORTHO05D007853 8.8e-42 173.3 95 77.9
PGSC0003DMG400009982 Solanum tuberosum HOM05D006313 ORTHO05D007853 2.0e-41 172.2 95 75.8
PGR083G2847 Punica granatum HOM05D006313 ORTHO05D007853 2.6e-41 171.8 93 78.5
CSS0043965 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 3.3e-41 171.4 93 77.4
Gohir.D05G182400 Gossypium hirsutum HOM05D006313 ORTHO05D007853 3.3e-41 171.4 95 76.8
Gorai.009G187700 Gossypium raimondii HOM05D006313 ORTHO05D007853 3.3e-41 171.4 95 76.8
MELO3C017021.2 Cucumis melo HOM05D006313 ORTHO05D007853 5.7e-41 170.6 93 78.5
Thecc.08G059800 Theobroma cacao HOM05D006313 ORTHO05D007853 5.7e-41 170.6 95 74.7
Duzib093G1521 Durio zibethinus HOM05D006313 ORTHO05D007853 7.4e-41 170.2 93 78.5
QL02p014292 Quercus lobata HOM05D006313 ORTHO05D007853 7.4e-41 170.2 93 75.3
Eucgr.F01772 Eucalyptus grandis HOM05D006313 ORTHO05D007853 9.7e-41 169.9 95 75.8
GSVIVG01013365001 Vitis vinifera HOM05D006313 ORTHO05D007853 9.7e-41 169.9 93 76.3
vmacro04407 Vaccinium macrocarpon HOM05D006313 ORTHO05D007853 1.7e-40 169.1 95 76.8
Dinv31948 Davidia involucrata HOM05D006313 ORTHO05D007853 2.8e-40 168.3 95 74.7
AUR62040798 Chenopodium quinoa HOM05D006313 ORTHO05D007853 3.7e-40 167.9 95 74.7
Haze_22787 Corylus avellana HOM05D006313 ORTHO05D007853 3.7e-40 167.9 93 76.3
Prupe.1G353800 Prunus persica HOM05D006313 ORTHO05D007853 3.7e-40 167.9 93 77.4
CiPaw.07G138200 Carya illinoinensis HOM05D006313 ORTHO05D007853 4.8e-40 167.5 93 76.3
Gohir.A05G179200 Gossypium hirsutum HOM05D006313 ORTHO05D007853 4.8e-40 167.5 95 75.8
Peaxi162Scf00711g00530 Petunia axillaris HOM05D006313 ORTHO05D007853 4.8e-40 167.5 93 75.3
RcHm_v2.0_Chr6g0304381 Rosa chinensis HOM05D006313 ORTHO05D007853 4.8e-40 167.5 93 76.3
MBI08_g24269_MAGBIO Magnolia biondii HOM05D006313 ORTHO05D007853 6.3e-40 167.2 93 74.2
A04p23350 Brassica napus HOM05D006313 ORTHO05D007853 8.2e-40 166.8 95 73.7
C04p59650 Brassica napus HOM05D006313 ORTHO05D007853 8.2e-40 166.8 95 73.7
BolC4t27473H Brassica oleracea HOM05D006313 ORTHO05D007853 8.2e-40 166.8 95 73.7
BraA04t17863Z Brassica rapa HOM05D006313 ORTHO05D007853 8.2e-40 166.8 95 73.7
ClCG11G018700 Citrullus lanatus HOM05D006313 ORTHO05D007853 8.2e-40 166.8 93 75.3
Thhalv10016264m.g Eutrema salsugineum HOM05D006313 ORTHO05D007853 8.2e-40 166.8 95 73.7
BcaB06g28382 Brassica carinata HOM05D006313 ORTHO05D007853 1.1e-39 166.4 95 72.6
Carub.0004s1176 Capsella rubella HOM05D006313 ORTHO05D007853 1.1e-39 166.4 95 73.7
Rhsim07G0255100 Rhododendron simsii HOM05D006313 ORTHO05D007853 1.1e-39 166.4 95 73.7
CsaV3_4G037230 Cucumis sativus L. HOM05D006313 ORTHO05D007853 1.4e-39 166.0 93 76.3
MD08G1002100 Malus domestica HOM05D006313 ORTHO05D007853 1.4e-39 166.0 93 76.3
ATR0661G251 Amborella trichopoda HOM05D006313 ORTHO05D007853 1.8e-39 165.6 95 73.7
FAN15G3120 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.8e-39 165.6 92 76.1
FAN20G0447 Fragaria x ananassa HOM05D006313 ORTHO05D007853 1.8e-39 165.6 92 76.1
Medtr5g066730 Medicago truncatula HOM05D006313 ORTHO05D007853 1.8e-39 165.6 93 73.1
Nitab4.5_0000588g0050 Nicotiana tabacum HOM05D006313 ORTHO05D007853 1.8e-39 165.6 95 72.6
Sp4g13150 Schrenkiella parvula HOM05D006313 ORTHO05D007853 1.8e-39 165.6 95 72.6
TPR.G21513 Trifolium pratense HOM05D006313 ORTHO05D007853 1.8e-39 165.6 93 72.0
TAR381G0755 Trochodendron aralioides HOM05D006313 ORTHO05D007853 1.8e-39 165.6 93 74.2
EL10Ac1g01951 Beta vulgaris HOM05D006313 ORTHO05D007853 2.4e-39 165.2 95 73.7
Cpa.g.sc801.5 Carica papaya HOM05D006313 ORTHO05D007853 3.1e-39 164.9 95 71.6
Hma1.2p1_0507F.1_g168570 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 3.1e-39 164.9 95 73.7
Hma1.2p1_0507F.1_g168580 Hydrangea macrophylla HOM05D006313 ORTHO05D007853 3.1e-39 164.9 95 73.7
CAN.G311.119 Capsicum annuum HOM05D006313 ORTHO05D007853 4.1e-39 164.5 95 70.5
AL4G25490 Arabidopsis lyrata HOM05D006313 ORTHO05D007853 5.3e-39 164.1 95 71.6
Glyma.14G223400 Glycine max HOM05D006313 ORTHO05D007853 6.9e-39 163.7 93 73.1
Manes.18G004800 Manihot esculenta HOM05D006313 ORTHO05D007853 6.9e-39 163.7 93 74.2
Oeu000694.1 Olea europaea HOM05D006313 ORTHO05D007853 9.1e-39 163.3 95 70.5
VMungo0647G1480 Vigna mungo HOM05D006313 ORTHO05D007853 9.1e-39 163.3 93 72.0
AT2G30600 Arabidopsis thaliana HOM05D006313 ORTHO05D007853 1.2e-38 162.9 95 71.6
PSO170G0983 Papaver somniferum HOM05D006313 ORTHO05D007853 1.5e-38 162.5 93 73.1
PSO210G6994 Papaver somniferum HOM05D006313 ORTHO05D007853 1.5e-38 162.5 93 73.1
CANSAT25G3184 Cannabis sativa HOM05D006313 ORTHO05D007853 2.0e-38 162.2 93 74.2
Sabra02G0007500 Salix brachista HOM05D006313 ORTHO05D007853 2.6e-38 161.8 93 75.3
CDE02G1829 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 4.5e-38 161.0 93 73.1
Atru.chr13.141 Acer truncatum HOM05D006313 ORTHO05D007853 5.9e-38 160.6 93 73.1
AagrBONN_evm.TU.Sc2ySwM_228.121 Anthoceros agrestis HOM05D006313 ORTHO05D007853 1.0e-37 159.8 95 71.6
Aqoxy5G01036 Aquilegia oxysepala HOM05D006313 ORTHO05D007853 1.0e-37 159.8 93 71.0
Lj5g0009044 Lotus japonicus HOM05D006313 ORTHO05D007853 1.0e-37 159.8 93 71.0
Hund05111 Selenicereus undatus HOM05D006313 ORTHO05D007853 1.0e-37 159.8 95 70.5
THA.LOC104825426 Tarenaya hassleriana HOM05D006313 ORTHO05D007853 1.0e-37 159.8 95 69.5
unitig_22.g5883 Utricularia gibba HOM05D006313 ORTHO05D007853 1.0e-37 159.8 95 71.6
Phvul.001G001100 Phaseolus vulgaris HOM05D006313 ORTHO05D007853 1.3e-37 159.5 93 69.9
CDE04G1532 Ceratophyllum demersum HOM05D006313 ORTHO05D007853 2.2e-37 158.7 93 71.0
TWI12G0830 Tripterygium wilfordii HOM05D006313 ORTHO05D007853 2.2e-37 158.7 93 73.1
Aa31LG5G6170 Aethionema arabicum HOM05D006313 ORTHO05D007853 2.9e-37 158.3 92 71.7
Potri.002G010100 Populus trichocarpa HOM05D006313 ORTHO05D007853 3.8e-37 157.9 93 73.1
DCAR_013918 Daucus carota HOM05D006313 ORTHO05D007853 5.0e-37 157.5 95 68.4
SGA_v2.0_scaffold54G19673 Striga asiatica HOM05D006313 ORTHO05D007853 8.5e-37 156.8 95 67.4
arahy.Tifrunner.gnm1.ann1.N9IWSS Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-36 156.4 93 69.9
arahy.Tifrunner.gnm1.ann1.TM2XQH Arachis hypogaea HOM05D006313 ORTHO05D007853 1.1e-36 156.4 93 69.9
Mapoly0001s0491 Marchantia polymorpha HOM05D006313 ORTHO05D007853 1.4e-36 156.0 94 67.0
Potri.005G251300 Populus trichocarpa HOM05D006313 ORTHO05D007853 1.4e-36 156.0 93 72.0
Ca_25243_v3 Cicer arietinum L. HOM05D006313 ORTHO05D007853 3.2e-36 154.8 93 67.7
Cc10_g00630 Coffea canephora HOM05D006313 ORTHO05D007853 3.2e-36 154.8 93 66.7
Sabra05G0194300 Salix brachista HOM05D006313 ORTHO05D007853 7.2e-36 153.7 93 72.0
Sabra05G0194600 Salix brachista HOM05D006313 ORTHO05D007853 7.2e-36 153.7 93 72.0
Ciclev10003249m.g Citrus clementina HOM05D006313 ORTHO05D007853 9.4e-36 153.3 93 69.9
Lalb_Chr01g0008341 Lupinus albus HOM05D006313 ORTHO05D007853 9.4e-36 153.3 93 66.7
Migut.N02954 Erythranthe guttata HOM05D006313 ORTHO05D007853 1.6e-35 152.5 95 65.3
Pp3c3_5520 Physcomitrium patens HOM05D006313 ORTHO05D007853 1.6e-35 152.5 95 68.4
HanXRQChr15g0492461 Helianthus annuus HOM05D006313 ORTHO05D007853 4.7e-35 151.0 92 69.6
Lsat_1_v5_gn_9_45201 Lactuca sativa HOM05D006313 ORTHO05D007853 4.7e-35 151.0 93 68.8
ECA232G0012 Erigeron canadensis HOM05D006313 ORTHO05D007853 3.0e-34 148.3 95 66.3
SHI07994 Sapria himalayana HOM05D006313 ORTHO05D007853 3.9e-34 147.9 95 68.4
Sc02g0009110 Simmondsia chinensis HOM05D006313 ORTHO05D007853 2.8e-32 141.7 93 67.7
SMO361G0777 Selaginella moellendorffii HOM05D006313 ORTHO05D007853 7.0e-31 137.1 92 60.9
CBR_g6381 Chara braunii HOM05D006313 ORTHO05D007853 1.6e-30 136.0 95 58.9
HPP92_022696 Vanilla planifolia HOM05D006313 ORTHO05D007853 1.6e-30 136.0 93 64.5
FAN27G1942 Fragaria x ananassa HOM05D006313 ORTHO05D007853 2.0e-30 135.6 72 80.6
CARHR124070 Cardamine hirsuta HOM05D006313 ORTHO05D007853 3.8e-29 131.3 79 69.6
Cfa014086 Carpinus fangiana HOM05D006313 ORTHO05D007853 6.5e-29 130.6 72 76.4
AUR62036859 Chenopodium quinoa HOM05D006313 ORTHO05D007853 1.1e-28 129.8 73 74.0
Lj4A10G75 Lonicera japonica HOM05D006313 ORTHO05D007853 2.7e-27 125.2 74 70.3
Nn5g30955 Nelumbo nucifera HOM05D006313 ORTHO05D007853 2.7e-22 108.6 64 73.4
CSS0049724 Camellia sinensis var. sinensis HOM05D006313 ORTHO05D007853 1.3e-21 106.3 65 70.8
COL.COLO4_05222 Corchorus olitorius HOM05D006313 ORTHO05D007853 5.0e-21 104.4 52 82.7
Cre03.g158850 Chlamydomonas reinhardtii HOM05D006313 ORTHO05D007853 1.1e-20 103.2 91 51.6
Actinidia37918 Actinidia chinensis HOM05D006313 ORTHO05D007853 7.0e-15 84.0 46 73.9
PRCOL_00004404 Prasinoderma coloniale HOM05D006313 ORTHO05D007853 8.8e-10 67.0 92 37.0


User provided reference genes

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