Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 2.3e-93 345.5 166 100.0
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 2.5e-36 156.0 142 55.6
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 3.3e-36 155.6 89 75.3
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 4.3e-36 155.2 142 52.1
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 5.6e-36 154.8 95 70.5
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 5.6e-36 154.8 81 82.7
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 7.4e-36 154.5 85 77.6
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 7.4e-36 154.5 85 77.6
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 9.6e-36 154.1 81 81.5
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 1.3e-35 153.7 86 77.9
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 1.6e-35 153.3 76 86.8
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 1.6e-35 153.3 101 69.3
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 1.6e-35 153.3 87 77.0
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 2.1e-35 152.9 86 77.9
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 2.1e-35 152.9 87 75.9
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 2.1e-35 152.9 97 70.1
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 2.8e-35 152.5 85 78.8
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 2.8e-35 152.5 114 62.3
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.7e-35 152.1 85 76.5
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 3.7e-35 152.1 88 76.1
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 3.7e-35 152.1 102 70.6
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 3.7e-35 152.1 85 77.6
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 4.8e-35 151.8 85 75.3
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 4.8e-35 151.8 85 76.5
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 4.8e-35 151.8 81 79.0
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 6.2e-35 151.4 85 76.5
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 8.1e-35 151.0 87 75.9
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 8.1e-35 151.0 87 75.9
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 8.1e-35 151.0 87 75.9
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 8.1e-35 151.0 85 76.5
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 8.1e-35 151.0 129 58.1
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 1.1e-34 150.6 81 81.5
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 1.8e-34 149.8 83 79.5
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 2.4e-34 149.4 92 75.0
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.1e-34 149.1 85 75.3
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 3.1e-34 149.1 85 75.3
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 3.1e-34 149.1 87 73.6
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 3.1e-34 149.1 135 56.3
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 4.0e-34 148.7 83 77.1
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 4.0e-34 148.7 142 52.1
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 5.3e-34 148.3 90 72.2
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 6.9e-34 147.9 86 74.4
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 6.9e-34 147.9 86 74.4
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 1.2e-33 147.1 91 69.2
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 1.2e-33 147.1 86 75.6
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 1.2e-33 147.1 84 75.0
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 1.2e-33 147.1 94 68.1
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.2e-33 147.1 83 74.7
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 1.5e-33 146.7 104 68.3
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 1.5e-33 146.7 77 80.5
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 2.0e-33 146.4 142 52.1
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 2.0e-33 146.4 101 65.3
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 2.0e-33 146.4 84 72.6
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 2.6e-33 146.0 77 80.5
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 2.6e-33 146.0 88 72.7
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 2.6e-33 146.0 86 73.3
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 3.4e-33 145.6 90 71.1
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 3.4e-33 145.6 85 72.9
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 3.4e-33 145.6 92 67.4
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 5.8e-33 144.8 94 69.1
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 7.6e-33 144.4 79 75.9
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 1.3e-32 143.7 83 73.5
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.7e-32 143.3 124 54.8
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 2.2e-32 142.9 101 64.4
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.2e-32 142.9 85 70.6
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 2.2e-32 142.9 98 65.3
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 2.2e-32 142.9 102 64.7
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 2.9e-32 142.5 76 80.3
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 2.9e-32 142.5 85 71.8
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 4.9e-32 141.7 103 61.2
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 4.9e-32 141.7 104 62.5
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 8.4e-32 141.0 84 69.0
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 8.4e-32 141.0 70 82.9
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 8.4e-32 141.0 85 74.1
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 1.9e-31 139.8 85 69.4
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.9e-31 139.8 77 76.6
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 7.1e-31 137.9 70 81.4
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 7.1e-31 137.9 98 62.2
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 1.6e-30 136.7 70 81.4
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 6.0e-30 134.8 75 77.3
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 4.3e-28 128.6 63 85.7
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.3e-27 127.1 63 84.1
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 2.8e-27 125.9 71 78.9
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 1.1e-26 124.0 78 69.2
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 2.4e-26 122.9 88 65.9
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 9.0e-26 120.9 92 63.0
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 9.0e-26 120.9 61 85.2
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 1.2e-25 120.6 73 78.1
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 1.5e-25 120.2 71 78.9
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 1.5e-25 120.2 69 75.4
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 3.4e-25 119.0 73 69.9
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 1.1e-23 114.0 60 81.7
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 1.4e-23 113.6 81 64.2
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 3.2e-23 112.5 70 62.9
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 4.2e-23 112.1 65 73.8
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.7e-22 109.4 72 68.1
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 3.0e-21 105.9 100 53.0
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 4.8e-19 98.6 76 67.1
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 4.5e-17 92.0 63 57.1
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 2.5e-12 76.3 49 67.3


User provided reference genes

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