Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.1e-157 560.1 325 100.0
SEGI_20360 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.4e-59 233.4 136 88.2
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 5.3e-22 109.4 276 33.3
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 5.3e-22 109.4 213 34.7
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 6.9e-22 109.0 257 33.1
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 5.0e-20 102.8 287 32.1
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 8.5e-20 102.1 262 32.4
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 1.1e-19 101.7 225 34.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.9e-19 100.9 272 30.5
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 2.5e-19 100.5 222 36.5
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 3.2e-19 100.1 292 31.5
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 9.4e-19 98.6 272 31.6
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 9.4e-19 98.6 262 31.7
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 2.1e-18 97.4 294 30.3
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 4.7e-18 96.3 287 30.7
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 6.1e-18 95.9 254 32.3
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 6.1e-18 95.9 246 31.7
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 7.9e-18 95.5 283 29.3
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 7.9e-18 95.5 247 32.8
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 1.0e-17 95.1 275 29.1
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.8e-17 94.4 228 32.0
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.3e-17 94.0 255 32.9
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.3e-17 94.0 230 33.0
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 3.0e-17 93.6 197 33.0
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 3.0e-17 93.6 259 30.5
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 5.2e-17 92.8 256 32.0
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 5.2e-17 92.8 257 31.5
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 8.8e-17 92.0 306 32.0
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 1.1e-16 91.7 184 34.8
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.1e-16 91.7 247 30.8
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.0e-16 90.9 272 27.9
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 2.6e-16 90.5 274 29.9
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 2.6e-16 90.5 266 31.2
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.3e-16 90.1 265 32.5
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 4.4e-16 89.7 262 32.1
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 4.4e-16 89.7 255 31.8
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 5.7e-16 89.4 259 30.5
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 5.7e-16 89.4 259 30.5
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 7.4e-16 89.0 309 28.2
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 7.4e-16 89.0 293 30.7
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 9.7e-16 88.6 228 32.0
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 9.7e-16 88.6 252 32.9
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 9.7e-16 88.6 253 32.4
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.3e-15 88.2 249 31.3
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 1.3e-15 88.2 270 30.4
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 2.2e-15 87.4 249 29.7
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 2.8e-15 87.0 277 29.6
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 3.7e-15 86.7 286 27.3
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.3e-15 85.9 252 30.6
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 6.3e-15 85.9 252 30.6
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.1e-14 85.1 241 29.9
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 2.4e-14 84.0 245 29.0
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 2.4e-14 84.0 287 28.2
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 4.1e-14 83.2 271 30.3
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 7.0e-14 82.4 255 30.6
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 9.1e-14 82.0 247 30.0
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 9.1e-14 82.0 191 31.4
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 9.1e-14 82.0 278 29.1
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.2e-13 81.6 284 28.9
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.2e-13 81.6 311 24.8
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.6e-13 81.3 261 29.5
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 2.0e-13 80.9 256 28.9
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 2.6e-13 80.5 187 32.1
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 4.5e-13 79.7 224 31.2
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 4.5e-13 79.7 199 32.2
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 1.3e-12 78.2 183 33.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.7e-12 77.8 176 31.2
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 2.2e-12 77.4 275 26.2
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 3.8e-12 76.6 277 28.5
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 3.8e-12 76.6 279 30.5
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 6.5e-12 75.9 193 31.1
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 6.5e-12 75.9 291 26.8
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 8.5e-12 75.5 269 28.3
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 8.5e-12 75.5 272 29.0
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.1e-11 75.1 180 30.6
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 1.5e-11 74.7 280 29.6
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.5e-11 74.7 273 28.9
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 1.9e-11 74.3 273 29.3
SEGI_13549 Sequoiadendron giganteum HOM05D000193 ORTHO05D009359 7.2e-11 72.4 38 89.5
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 9.4e-11 72.0 228 31.1
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 1.2e-10 71.6 254 28.3
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 2.1e-10 70.9 274 28.5
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 1.8e-09 67.8 267 26.2
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 3.0e-09 67.0 261 28.4
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 5.2e-09 66.2 272 26.5
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 6.7e-09 65.9 261 28.4
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 2.6e-08 63.9 280 28.2
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 2.6e-08 63.9 261 27.6
Mapoly0028s0047 Marchantia polymorpha HOM05D007444 ORTHO05D009359 4.4e-08 63.2 121 32.2
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 4.4e-08 63.2 116 36.2
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 8.2e-07 58.9 225 28.4
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 2.4e-06 57.4 273 26.7


User provided reference genes

Program Settings