Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13228 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 6.1e-85 317.4 154 100.0
SEGI_37027 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 2.1e-40 169.5 91 89.0
SEGI_24934 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 9.5e-38 160.6 88 85.2
SEGI_02562 Sequoiadendron giganteum HOM05D001236 ORTHO05D001090 1.7e-34 149.8 119 67.2
SEGI_39874 Sequoiadendron giganteum HOM05D005916 ORTHO05D007168 1.9e-30 136.3 79 87.3
SEGI_18639 Sequoiadendron giganteum HOM05D009239 ORTHO05D014369 1.8e-28 129.8 66 93.9
SEGI_11464 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 3.1e-20 102.4 53 90.6
SEGI_40045 Sequoiadendron giganteum HOM05D000181 ORTHO05D014369 3.1e-20 102.4 53 90.6
Mapoly0081s0059 Marchantia polymorpha HOM05D000181 ORTHO05D008796 2.1e-16 89.7 93 54.8
AagrBONN_evm.TU.Sc2ySwM_362.1257 Anthoceros agrestis HOM05D000181 ORTHO05D008796 6.0e-16 88.2 63 66.7
CSS0046503 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D008796 6.0e-16 88.2 65 61.5
Pp3c4_8640 Physcomitrium patens HOM05D000181 ORTHO05D008796 6.0e-16 88.2 86 53.5
MD02G1315900 Malus domestica HOM05D000181 ORTHO05D008796 7.9e-16 87.8 65 61.5
FvH4_1g24180 Fragaria vesca HOM05D000181 ORTHO05D008796 1.0e-15 87.4 65 60.0
FAN19G2441 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.0e-15 87.4 65 60.0
FAN23G1442 Fragaria x ananassa HOM05D000181 ORTHO05D008796 1.0e-15 87.4 65 60.0
Prupe.2G008800 Prunus persica HOM05D000181 ORTHO05D008796 1.0e-15 87.4 65 60.0
RcHm_v2.0_Chr2g0120571 Rosa chinensis HOM05D000181 ORTHO05D008796 1.0e-15 87.4 65 60.0
Lj1g0000900 Lotus japonicus HOM05D000181 ORTHO05D008796 1.3e-15 87.0 61 63.9
Sc07g0001700 Simmondsia chinensis HOM05D000181 ORTHO05D008796 1.3e-15 87.0 65 60.0
GSVIVG01026499001 Vitis vinifera HOM05D001952 ORTHO05D008796 1.3e-15 87.0 65 60.0
AL8G42000 Arabidopsis lyrata HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
AT5G64580 Arabidopsis thaliana HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Carub.0008s2538 Capsella rubella HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
CARHR278550 Cardamine hirsuta HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
DCAR_014343 Daucus carota HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Eucgr.H04960 Eucalyptus grandis HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Thhalv10003640m.g Eutrema salsugineum HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Gohir.A11G056700 Gossypium hirsutum HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Manes.13G083000 Manihot esculenta HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Nitab4.5_0000174g0060 Nicotiana tabacum HOM05D000181 ORTHO05D008796 1.7e-15 86.7 66 57.6
Potri.005G059700 Populus trichocarpa HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Sabra05G0050600 Salix brachista HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Sp2g27650 Schrenkiella parvula HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
Thecc.01G129300 Theobroma cacao HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 60.0
TAR625G0260 Trochodendron aralioides HOM05D000181 ORTHO05D008796 1.7e-15 86.7 65 58.5
Ah.03g146800 Amaranthus hybridus HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 58.5
BcaB02g09796 Brassica carinata HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
BcaC01g02686 Brassica carinata HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
A06p31320 Brassica napus HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
C03p61660 Brassica napus HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
BolC3t18429H Brassica oleracea HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
BraA06t26072Z Brassica rapa HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
ECA233G1045 Erigeron canadensis HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
FAN23G2380 Fragaria x ananassa HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
FAN26G0955 Fragaria x ananassa HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 58.5
FAN28G1095 Fragaria x ananassa HOM05D000181 ORTHO05D014369 2.3e-15 86.3 65 58.5
HanXRQChr15g0493481 Helianthus annuus HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
Lsat_1_v5_gn_4_137601 Lactuca sativa HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
SalBow1G3253 Salvia bowleyana HOM05D000181 ORTHO05D008796 2.3e-15 86.3 65 60.0
AUR62003594 Chenopodium quinoa HOM05D000181 ORTHO05D008796 3.0e-15 85.9 65 60.0
AUR62017907 Chenopodium quinoa HOM05D000181 ORTHO05D008796 3.0e-15 85.9 65 60.0
Nn5g28591 Nelumbo nucifera HOM05D000181 ORTHO05D008796 3.0e-15 85.9 65 58.5
Nitab4.5_0003622g0010 Nicotiana tabacum HOM05D000181 ORTHO05D008796 3.0e-15 85.9 66 57.6
Peaxi162Scf00066g01518 Petunia axillaris HOM05D000181 ORTHO05D008796 3.0e-15 85.9 65 58.5
Ciclev10000267m.g Citrus clementina HOM05D000181 ORTHO05D008796 3.9e-15 85.5 65 58.5
Migut.H00729 Erythranthe guttata HOM05D000181 ORTHO05D008796 3.9e-15 85.5 65 60.0
PSO017G6538 Papaver somniferum HOM05D000181 ORTHO05D008796 3.9e-15 85.5 61 62.3
PSO170G5995 Papaver somniferum HOM05D000181 ORTHO05D008796 3.9e-15 85.5 61 62.3
Hund04481 Selenicereus undatus HOM05D000181 ORTHO05D008796 3.9e-15 85.5 64 60.9
TWI75G0221 Tripterygium wilfordii HOM05D000181 ORTHO05D008796 3.9e-15 85.5 65 58.5
Atru.chr4.922 Acer truncatum HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
Ca_16934_v3 Cicer arietinum L. HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
COL.COLO4_35699 Corchorus olitorius HOM05D000181 ORTHO05D008796 5.1e-15 85.1 64 59.4
Gohir.D11G060900 Gossypium hirsutum HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
Gorai.007G065600 Gossypium raimondii HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
MBI03_g00431_MAGBIO Magnolia biondii HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
Medtr3g096000 Medicago truncatula HOM05D000181 ORTHO05D008796 5.1e-15 85.1 65 58.5
Aa31LG1G17360 Aethionema arabicum HOM05D000181 ORTHO05D008796 6.6e-15 84.7 65 58.5
Duzib147G0781 Durio zibethinus HOM05D000181 ORTHO05D008796 6.6e-15 84.7 65 58.5
Psat5g060120 Pisum sativum HOM05D000181 ORTHO05D008796 6.6e-15 84.7 65 58.5
TPR.G34653 Trifolium pratense HOM05D000181 ORTHO05D008796 6.6e-15 84.7 65 58.5
Dinv06068 Davidia involucrata HOM05D000181 ORTHO05D008796 8.7e-15 84.3 65 58.5
Sed0015491 Sechium edule HOM05D000181 ORTHO05D008796 8.7e-15 84.3 65 56.9
Solyc04g063360.3 Solanum lycopersicum HOM05D000181 ORTHO05D008796 8.7e-15 84.3 65 56.9
Sopen04g026280 Solanum pennellii HOM05D000181 ORTHO05D008796 8.7e-15 84.3 65 56.9
THA.LOC104799548 Tarenaya hassleriana HOM05D000181 ORTHO05D008796 8.7e-15 84.3 65 58.5
Aqoxy5G02248 Aquilegia oxysepala HOM05D000181 ORTHO05D008796 1.1e-14 84.0 80 52.5
PGR102G1783 Punica granatum HOM05D000181 ORTHO05D008796 1.1e-14 84.0 65 58.5
EL10Ac6g15283 Beta vulgaris HOM05D000181 ORTHO05D008796 1.5e-14 83.6 66 56.1
Cc07_g18240 Coffea canephora HOM05D000181 ORTHO05D008796 1.5e-14 83.6 65 58.5
Phvul.009G149600 Phaseolus vulgaris HOM05D000181 ORTHO05D008796 1.5e-14 83.6 65 56.9
HPP92_009285 Vanilla planifolia HOM05D000181 ORTHO05D008796 1.5e-14 83.6 61 60.7
ATR1136G075 Amborella trichopoda HOM05D000181 ORTHO05D008796 1.9e-14 83.2 65 58.5
Cpa.g.sc382.2 Carica papaya HOM05D000181 ORTHO05D008796 1.9e-14 83.2 65 58.5
QL06p029080 Quercus lobata HOM05D000181 ORTHO05D008796 2.5e-14 82.8 65 58.5
Glyma.04G213800 Glycine max HOM05D000181 ORTHO05D008796 3.3e-14 82.4 65 56.9
Glyma.06G152500 Glycine max HOM05D000181 ORTHO05D008796 3.3e-14 82.4 65 56.9
VMungo1309G1858 Vigna mungo HOM05D000181 ORTHO05D008796 3.3e-14 82.4 65 55.4
ClCG01G015450 Citrullus lanatus HOM05D000181 ORTHO05D008796 4.3e-14 82.0 65 56.9
Oeu037813.3 Olea europaea HOM05D000181 ORTHO05D008796 5.6e-14 81.6 65 56.9
SGA_v2.0_scaffold289G47267 Striga asiatica HOM05D000181 ORTHO05D008796 5.6e-14 81.6 65 56.9
CiPaw.03G123000 Carya illinoinensis HOM05D000181 ORTHO05D008796 7.3e-14 81.3 65 56.9
CDE08G1321 Ceratophyllum demersum HOM05D000181 ORTHO05D008796 9.6e-14 80.9 65 55.4
FAN28G2094 Fragaria x ananassa HOM05D000181 ORTHO05D014369 9.6e-14 80.9 57 63.2
MELO3C008051.2 Cucumis melo HOM05D000181 ORTHO05D008796 2.1e-13 79.7 65 53.8
Lalb_Chr08g0238431 Lupinus albus HOM05D000181 ORTHO05D008796 2.1e-13 79.7 65 56.9
CAN.G46.8 Capsicum annuum HOM05D000181 ORTHO05D008796 4.8e-13 78.6 53 62.3
Actinidia06632 Actinidia chinensis HOM05D000181 ORTHO05D008796 1.1e-12 77.4 78 48.7
CsaV3_6G041690 Cucumis sativus L. HOM05D000181 ORTHO05D008796 1.1e-12 77.4 65 50.8
Haze_25205 Corylus avellana HOM05D000181 ORTHO05D008796 1.4e-12 77.0 70 54.3
SEGI_13331 Sequoiadendron giganteum HOM05D000088 ORTHO05D004224 2.4e-12 76.3 40 90.0
Lj4C847G8 Lonicera japonica HOM05D000181 ORTHO05D008796 4.0e-12 75.5 53 62.3
CiPaw.03G123200 Carya illinoinensis HOM05D000181 ORTHO05D008796 3.4e-11 72.4 54 57.4
SMO358G0281 Selaginella moellendorffii HOM05D000181 ORTHO05D008796 5.8e-11 71.6 61 59.0
arahy.Tifrunner.gnm1.ann1.ESH7KG Arachis hypogaea HOM05D000219 ORTHO05D008796 7.6e-11 71.2 50 60.0
SEGI_24080 Sequoiadendron giganteum HOM05D003682 ORTHO05D004224 9.9e-11 70.9 38 86.8
SEGI_38278 Sequoiadendron giganteum HOM05D000181 ORTHO05D008796 2.9e-10 69.3 37 91.9
CBR_g6364 Chara braunii HOM05D000181 ORTHO05D008796 1.1e-06 57.4 53 52.8
unitig_27.g25343 Utricularia gibba HOM05D000181 ORTHO05D008796 4.3e-06 55.5 42 57.1


User provided reference genes

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