Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 3.4e-141 505.0 254 100.0
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 8.0e-58 228.0 266 46.2
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 7.5e-56 221.5 274 44.2
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.2e-55 219.9 268 44.4
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 4.9e-55 218.8 269 44.2
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 8.3e-55 218.0 269 44.6
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.1e-54 217.6 270 44.4
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.4e-54 217.2 272 43.8
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.4e-54 217.2 272 43.8
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 1.8e-54 216.9 264 42.4
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.4e-54 216.5 269 44.2
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.1e-54 215.7 270 44.1
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 2.0e-53 213.4 270 43.3
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 2.0e-53 213.4 270 43.3
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 2.0e-53 213.4 275 45.8
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 1.3e-52 210.7 264 46.6
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 1.3e-52 210.7 264 46.6
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.3e-52 209.9 273 45.1
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 3.0e-52 209.5 241 49.0
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.0e-52 209.5 273 46.2
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 6.6e-52 208.4 238 50.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 6.6e-52 208.4 273 44.3
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 6.6e-52 208.4 243 46.5
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 8.6e-52 208.0 247 48.6
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 1.1e-51 207.6 266 42.9
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 1.5e-51 207.2 269 46.1
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.9e-51 206.8 267 45.7
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 2.5e-51 206.5 234 48.7
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 7.3e-51 204.9 262 43.1
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 7.3e-51 204.9 234 48.3
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 9.5e-51 204.5 234 48.3
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 9.5e-51 204.5 276 44.9
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 9.5e-51 204.5 273 45.1
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.2e-50 204.1 248 47.2
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.2e-50 204.1 234 47.9
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.8e-50 203.0 235 47.2
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 3.6e-50 202.6 273 44.3
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 3.6e-50 202.6 269 44.2
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 4.7e-50 202.2 228 48.7
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 8.0e-50 201.4 228 47.4
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 8.0e-50 201.4 234 47.4
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 1.0e-49 201.1 272 44.5
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.4e-49 200.7 262 43.1
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 1.8e-49 200.3 266 44.7
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 1.8e-49 200.3 269 44.6
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 2.3e-49 199.9 247 45.7
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.1e-49 199.5 265 41.5
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 3.1e-49 199.5 263 44.9
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.1e-49 199.5 234 46.2
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 4.0e-49 199.1 243 44.9
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 4.0e-49 199.1 272 44.1
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 4.0e-49 199.1 272 44.1
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 4.0e-49 199.1 234 46.6
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 5.2e-49 198.7 273 43.2
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 6.8e-49 198.4 274 43.1
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 6.8e-49 198.4 234 46.6
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 1.2e-48 197.6 247 45.7
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 1.2e-48 197.6 244 46.3
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 1.5e-48 197.2 270 41.1
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 3.4e-48 196.1 268 44.0
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 3.4e-48 196.1 242 45.9
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 3.4e-48 196.1 231 48.5
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 3.4e-48 196.1 273 44.7
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 4.4e-48 195.7 270 41.1
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 4.4e-48 195.7 271 42.4
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 4.4e-48 195.7 237 47.7
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 5.8e-48 195.3 272 41.5
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 7.5e-48 194.9 235 46.4
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 2.2e-47 193.4 240 45.0
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 2.9e-47 193.0 214 50.0
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 4.9e-47 192.2 274 44.2
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 6.4e-47 191.8 270 42.2
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 8.3e-47 191.4 266 41.7
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 2.4e-46 189.9 264 42.4
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 3.2e-46 189.5 243 46.9
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 5.4e-46 188.7 226 48.2
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 7.0e-46 188.3 233 44.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 1.6e-45 187.2 241 44.4
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 2.7e-45 186.4 236 43.2
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 2.7e-45 186.4 243 44.9
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 2.7e-45 186.4 243 44.9
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 1.3e-44 184.1 243 44.4
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 1.7e-44 183.7 251 43.8
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 8.6e-44 181.4 273 40.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 7.3e-43 178.3 217 43.8
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 9.5e-43 177.9 234 42.7
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 6.8e-41 171.8 234 42.3
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.2e-40 171.0 253 40.3
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 1.7e-39 167.2 228 43.4
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 3.5e-37 159.5 242 40.5
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 7.8e-37 158.3 179 48.0
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 1.3e-36 157.5 179 48.6
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 1.7e-36 157.1 268 39.6
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 2.3e-36 156.8 217 40.1
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 2.3e-36 156.8 245 39.6
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 5.1e-36 155.6 242 40.9
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 6.6e-36 155.2 232 39.7
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.2e-34 151.0 246 40.7
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 2.3e-33 146.7 232 41.8
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 3.1e-33 146.4 242 39.7
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 4.0e-33 146.0 239 41.4
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 4.0e-33 146.0 239 41.4
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 2.0e-32 143.7 234 40.6
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 5.8e-32 142.1 267 37.5
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.4e-30 136.7 190 38.4
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.2e-30 136.3 190 38.4
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 3.0e-28 129.8 238 35.3
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 3.9e-28 129.4 262 35.1
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 3.3e-27 126.3 155 47.7
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 4.0e-25 119.4 232 36.2
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 1.4e-22 110.9 215 38.1
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.9e-22 110.5 146 41.1
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 6.6e-20 102.1 214 35.0
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 1.3e-18 97.8 168 37.5
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 2.2e-15 87.0 90 50.0
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.8e-15 86.3 110 40.9
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 6.4e-15 85.5 85 48.2
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 6.4e-15 85.5 85 48.2
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 2.6e-08 63.5 81 46.9
MCO12G436 Micromonas commoda HOM05D006853 ORTHO05D008906 5.8e-08 62.4 173 27.7
CBR_g31493 Chara braunii HOM05D030646 ORTHO05D028724 9.3e-06 55.1 180 26.1


User provided reference genes

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