Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 4.9e-85 317.8 161 100.0
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.3e-45 186.8 143 66.4
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 1.3e-45 186.8 152 64.5
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.2e-45 186.0 141 68.8
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 3.8e-45 185.3 143 68.5
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 8.4e-45 184.1 162 63.6
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 3.2e-44 182.2 127 73.2
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 3.2e-44 182.2 150 66.7
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.2e-44 181.8 148 65.5
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 1.2e-43 180.3 144 66.7
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 1.6e-43 179.9 162 59.9
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 2.1e-43 179.5 153 66.0
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.7e-43 179.1 149 65.1
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 2.7e-43 179.1 154 63.6
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.7e-43 179.1 163 62.0
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 3.5e-43 178.7 148 64.9
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 3.5e-43 178.7 148 64.9
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 4.6e-43 178.3 138 68.1
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 4.6e-43 178.3 108 79.6
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 7.9e-43 177.6 150 62.7
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 7.9e-43 177.6 131 67.2
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 1.3e-42 176.8 162 64.2
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.3e-42 176.8 145 62.1
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.3e-42 176.8 136 68.4
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 2.3e-42 176.0 138 68.8
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 2.3e-42 176.0 134 68.7
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.0e-42 175.6 137 67.9
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 3.0e-42 175.6 115 76.5
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 3.0e-42 175.6 138 65.2
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 3.0e-42 175.6 161 60.9
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 3.9e-42 175.3 158 60.1
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 3.9e-42 175.3 102 82.4
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 3.9e-42 175.3 136 66.2
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 8.7e-42 174.1 139 66.2
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 1.5e-41 173.3 164 61.0
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.5e-41 173.3 138 67.4
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 1.9e-41 172.9 168 59.5
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 1.9e-41 172.9 164 59.1
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 2.5e-41 172.6 111 78.4
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 2.5e-41 172.6 153 64.1
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.5e-41 172.6 122 73.0
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.5e-41 172.6 122 73.0
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 3.3e-41 172.2 138 65.9
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 4.3e-41 171.8 161 60.9
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.3e-41 171.8 112 75.9
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 4.3e-41 171.8 119 71.4
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 4.3e-41 171.8 135 66.7
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 4.3e-41 171.8 142 65.5
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 5.6e-41 171.4 126 69.0
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 5.6e-41 171.4 158 62.7
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 7.4e-41 171.0 98 80.6
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 7.4e-41 171.0 133 68.4
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 7.4e-41 171.0 159 62.3
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 9.6e-41 170.6 161 60.9
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 9.6e-41 170.6 163 58.3
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 9.6e-41 170.6 159 62.3
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.3e-40 170.2 99 84.8
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.6e-40 169.9 152 62.5
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.6e-40 169.9 159 61.6
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.8e-40 169.1 151 58.9
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 2.8e-40 169.1 143 65.7
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.7e-40 168.7 151 58.9
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 4.8e-40 168.3 167 57.5
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 4.8e-40 168.3 133 66.9
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 6.2e-40 167.9 131 67.2
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 6.2e-40 167.9 112 75.9
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 6.2e-40 167.9 164 60.4
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 6.2e-40 167.9 99 82.8
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 8.2e-40 167.5 98 82.7
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 8.2e-40 167.5 164 60.4
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.1e-39 167.2 153 60.8
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 1.4e-39 166.8 140 65.0
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-39 166.8 138 65.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 1.4e-39 166.8 138 65.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.4e-39 166.8 133 66.9
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.4e-39 166.8 133 66.2
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 1.4e-39 166.8 120 73.3
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.8e-39 166.4 138 65.9
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.8e-39 166.4 138 65.9
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 1.8e-39 166.4 102 79.4
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 1.8e-39 166.4 102 79.4
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.4e-39 166.0 136 64.0
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 3.1e-39 165.6 139 64.7
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-39 165.6 139 65.5
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 3.1e-39 165.6 139 64.7
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 3.1e-39 165.6 139 64.7
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 3.1e-39 165.6 139 65.5
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 3.1e-39 165.6 161 58.4
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 3.1e-39 165.6 147 62.6
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 5.3e-39 164.9 144 60.4
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 5.3e-39 164.9 139 65.5
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 6.9e-39 164.5 134 67.2
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 6.9e-39 164.5 157 58.0
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-38 163.7 139 64.0
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.5e-38 163.3 139 64.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.0e-38 162.9 146 61.0
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.0e-38 162.9 121 68.6
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.6e-38 162.5 98 81.6
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 3.4e-38 162.2 121 67.8
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 3.4e-38 162.2 99 78.8
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 4.5e-38 161.8 111 73.0
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 5.8e-38 161.4 139 64.0
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.0e-37 160.6 143 59.4
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 1.7e-37 159.8 131 64.1
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 2.2e-37 159.5 99 76.8
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.1e-36 157.1 156 53.2
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 5.5e-36 154.8 99 74.7
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 9.3e-36 154.1 115 65.2
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.6e-35 153.3 166 50.0
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 4.6e-35 151.8 162 55.6
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 3.0e-34 149.1 149 54.4
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 6.7e-34 147.9 100 68.0
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 1.9e-33 146.4 100 70.0
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 2.5e-33 146.0 125 64.0
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 8.2e-32 141.0 81 82.7
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 2.5e-25 119.4 111 62.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 2.2e-24 116.3 72 76.4
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 3.4e-22 109.0 137 49.6
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 4.2e-20 102.1 90 55.6
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 9.7e-17 90.9 86 53.5
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 1.7e-13 80.1 50 78.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 2.2e-13 79.7 93 46.2
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 8.5e-13 77.8 48 79.2
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 8.5e-13 77.8 48 79.2
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 1.4e-12 77.0 128 46.1


User provided reference genes

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