Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.3e-89 331.3 162 100.0
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 4.0e-18 95.5 88 53.4
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 4.0e-18 95.5 98 49.0
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 5.2e-18 95.1 107 46.7
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.2e-18 95.1 115 45.2
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 5.2e-18 95.1 98 48.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 1.2e-17 94.0 98 48.0
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.2e-17 94.0 138 39.9
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.5e-17 93.6 118 45.8
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-17 93.6 86 52.3
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.5e-17 93.6 86 52.3
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.5e-17 93.6 102 49.0
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.6e-17 92.8 64 64.1
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 2.6e-17 92.8 104 48.1
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.4e-17 92.4 88 48.9
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 3.4e-17 92.4 50 74.0
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.4e-17 92.0 50 74.0
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 4.4e-17 92.0 49 73.5
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 5.7e-17 91.7 49 75.5
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.7e-17 91.7 59 66.1
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 5.7e-17 91.7 117 45.3
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 7.5e-17 91.3 77 54.5
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 9.8e-17 90.9 95 50.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.3e-16 90.5 135 40.0
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.3e-16 90.5 104 48.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 1.3e-16 90.5 94 47.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.3e-16 90.5 55 65.5
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.7e-16 90.1 86 51.2
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.7e-16 90.1 86 51.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 1.7e-16 90.1 59 66.1
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.2e-16 89.7 88 50.0
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 3.7e-16 89.0 75 52.0
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.7e-16 89.0 135 39.3
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.7e-16 89.0 77 53.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 4.8e-16 88.6 53 69.8
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 4.8e-16 88.6 88 51.1
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 4.8e-16 88.6 78 53.8
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 6.3e-16 88.2 88 51.1
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 6.3e-16 88.2 62 61.3
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 6.3e-16 88.2 75 57.3
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 8.3e-16 87.8 101 45.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 8.3e-16 87.8 60 63.3
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 8.3e-16 87.8 62 58.1
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.3e-16 87.8 88 50.0
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 8.3e-16 87.8 57 64.9
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 8.3e-16 87.8 48 70.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 8.3e-16 87.8 86 47.7
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 8.3e-16 87.8 78 52.6
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.1e-15 87.4 116 41.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.1e-15 87.4 129 41.1
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 1.1e-15 87.4 129 41.1
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.1e-15 87.4 129 41.1
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.1e-15 87.4 48 72.9
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.1e-15 87.4 76 55.3
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 1.1e-15 87.4 81 51.9
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.1e-15 87.4 88 47.7
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.1e-15 87.4 105 45.7
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.4e-15 87.0 53 66.0
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.4e-15 87.0 75 54.7
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 1.8e-15 86.7 108 40.7
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.8e-15 86.7 82 48.8
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.8e-15 86.7 79 49.4
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.4e-15 86.3 64 57.8
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 2.4e-15 86.3 87 44.8
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 2.4e-15 86.3 106 47.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 3.1e-15 85.9 75 48.0
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.1e-15 85.9 69 58.0
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.1e-15 85.9 76 53.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 4.1e-15 85.5 53 67.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 5.4e-15 85.1 59 61.0
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 5.4e-15 85.1 64 57.8
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 5.4e-15 85.1 73 54.8
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 5.4e-15 85.1 93 48.4
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.4e-15 85.1 73 54.8
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 7.0e-15 84.7 51 70.6
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 7.0e-15 84.7 104 45.2
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 9.1e-15 84.3 60 63.3
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 9.1e-15 84.3 48 75.0
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 9.1e-15 84.3 93 49.5
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.2e-14 84.0 73 52.1
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.2e-14 84.0 53 66.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 2.0e-14 83.2 78 48.7
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.0e-14 83.2 78 53.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.0e-14 83.2 61 60.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.0e-14 83.2 97 45.4
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.7e-14 82.8 106 43.4
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.7e-14 82.8 79 51.9
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.7e-14 82.8 60 58.3
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 2.7e-14 82.8 67 58.2
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.5e-14 82.4 53 64.2
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 4.5e-14 82.0 80 43.8
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 7.7e-14 81.3 74 50.0
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.9e-13 79.3 71 50.7
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 3.8e-13 79.0 116 38.8
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 3.8e-13 79.0 57 57.9
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 8.5e-13 77.8 42 71.4
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.1e-12 77.4 82 48.8
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.1e-12 77.4 54 59.3
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.2e-12 75.5 55 65.5
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.5e-12 75.1 81 42.0
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 5.5e-12 75.1 43 69.8
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 9.5e-12 74.3 44 70.5


User provided reference genes

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