Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 0.0e+00 1269.2 602 100.0
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 8.7e-228 793.9 376 100.0
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 1.3e-103 381.3 598 36.6
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 1.0e-98 365.2 602 36.9
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.8e-95 354.4 605 34.7
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 3.3e-94 350.1 602 34.2
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 5.7e-94 349.4 599 37.1
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 4.8e-93 346.3 599 36.2
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.4e-92 344.0 600 34.2
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 1.5e-91 341.3 592 34.8
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 4.2e-89 333.2 593 35.2
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 5.5e-89 332.8 592 34.5
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 1.6e-88 331.3 595 34.6
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 2.1e-88 330.9 607 35.6
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 4.6e-88 329.7 598 32.6
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 7.9e-88 328.9 593 34.1
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 1.8e-87 327.8 573 34.9
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 3.0e-87 327.0 598 34.4
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 3.0e-87 327.0 596 34.7
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 3.9e-87 326.6 600 36.2
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 6.7e-87 325.9 601 33.8
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 6.7e-87 325.9 598 34.3
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 8.7e-87 325.5 598 34.1
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 3.3e-86 323.6 589 33.4
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 9.7e-86 322.0 596 33.7
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 9.7e-86 322.0 604 34.6
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 9.7e-86 322.0 595 33.4
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 2.2e-85 320.9 598 34.1
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 2.2e-85 320.9 595 34.6
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 2.8e-85 320.5 598 33.8
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 3.7e-85 320.1 600 33.5
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 3.7e-85 320.1 593 34.1
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 4.8e-85 319.7 600 33.2
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.1e-84 318.5 596 33.9
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.8e-84 317.8 590 34.9
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 3.1e-84 317.0 595 33.8
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 4.1e-84 316.6 590 33.4
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 4.1e-84 316.6 593 33.7
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 9.1e-84 315.5 592 34.1
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 1.2e-83 315.1 607 33.4
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.0e-83 314.3 601 34.1
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.0e-82 312.0 601 33.4
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 3.8e-82 310.1 598 33.3
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 1.4e-81 308.1 608 33.2
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.2e-81 307.0 602 33.7
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 9.4e-81 305.4 598 33.8
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 2.7e-80 303.9 591 34.7
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 4.6e-80 303.1 604 33.3
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 3.9e-79 300.1 602 32.2
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 1.5e-78 298.1 594 33.0
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 1.3e-77 295.0 541 32.7
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 4.1e-76 290.0 590 34.4
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 3.4e-75 287.0 604 30.3
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 7.7e-75 285.8 538 34.6
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 1.1e-73 282.0 594 33.0
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 1.2e-72 278.5 538 34.6
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 7.9e-72 275.8 572 33.2
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 3.0e-71 273.9 594 31.1
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 7.4e-70 269.2 591 31.8
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 9.7e-70 268.9 589 31.7
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.3e-69 268.5 525 34.1
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 1.8e-68 264.6 379 39.6
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 3.8e-66 256.9 523 33.8
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.5e-65 255.0 583 31.7
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 3.2e-65 253.8 501 33.7
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 1.5e-62 245.0 374 36.6
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 9.7e-62 242.3 277 43.3
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 3.1e-60 237.3 278 42.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 5.3e-60 236.5 547 30.3
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 1.2e-59 235.3 414 34.8
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 1.3e-58 231.9 372 36.6
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.7e-58 231.5 274 44.2
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 6.5e-58 229.6 280 43.2
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 9.4e-57 225.7 290 42.8
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 7.7e-51 206.1 229 45.4
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 5.9e-35 153.3 127 55.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 9.5e-33 146.0 598 24.1
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 3.4e-30 137.5 142 49.3
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 1.1e-25 122.5 339 28.0
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.2e-21 108.2 194 34.0
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 3.9e-18 97.4 219 29.7
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 7.6e-14 83.2 186 30.6
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 1.4e-12 79.0 97 40.2
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 5.4e-12 77.0 225 26.7
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 3.9e-10 70.9 104 36.5
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 3.3e-09 67.8 91 36.3
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 5.6e-09 67.0 94 42.6
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.6e-08 65.5 82 42.7
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 8.1e-08 63.2 94 40.4
AagrBONN_evm.TU.Sc2ySwM_369.230 Anthoceros agrestis HOM05D024043 ORTHO05D031244 1.8e-07 62.0 97 37.1
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 2.4e-07 61.6 91 40.7


User provided reference genes

Program Settings