Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_13044 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 7.4e-141 503.8 247 100.0
SEGI_22450 Sequoiadendron giganteum HOM05D007235 ORTHO05D008985 4.3e-125 451.4 236 92.8
Duzib093G1209 Durio zibethinus HOM05D007235 ORTHO05D008985 3.5e-66 255.8 212 59.9
Gorai.002G238400 Gossypium raimondii HOM05D007235 ORTHO05D008985 3.9e-65 252.3 221 57.0
PSO339G2372 Papaver somniferum HOM05D007235 ORTHO05D008985 5.0e-65 251.9 235 53.2
MBI17_g35889_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 1.5e-64 250.4 210 58.1
PSO339G1765 Papaver somniferum HOM05D007235 ORTHO05D008985 2.5e-64 249.6 221 55.7
COL.COLO4_29683 Corchorus olitorius HOM05D007235 ORTHO05D008985 3.3e-64 249.2 212 59.4
DCAR_013408 Daucus carota HOM05D007235 ORTHO05D008985 3.3e-64 249.2 214 57.0
Prupe.7G102400 Prunus persica HOM05D007235 ORTHO05D008985 4.3e-64 248.8 232 54.7
TWI74G0874 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 7.3e-64 248.1 229 55.0
TWI74G1128 Tripterygium wilfordii HOM05D007235 ORTHO05D008985 7.3e-64 248.1 229 55.0
Atru.chr8.1456 Acer truncatum HOM05D007235 ORTHO05D008985 1.6e-63 246.9 222 54.1
GSVIVG01033881001 Vitis vinifera HOM05D007235 ORTHO05D008985 1.6e-63 246.9 214 56.5
Actinidia05406 Actinidia chinensis HOM05D007235 ORTHO05D008985 2.1e-63 246.5 222 54.5
Aqoxy2G01076 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 2.1e-63 246.5 212 57.5
PSO801G0535 Papaver somniferum HOM05D007235 ORTHO05D008985 2.8e-63 246.1 211 55.9
FAN14G3457 Fragaria x ananassa HOM05D007235 ORTHO05D008985 3.6e-63 245.7 230 57.0
RcHm_v2.0_Chr3g0474671 Rosa chinensis HOM05D007235 ORTHO05D008985 3.6e-63 245.7 230 55.7
Atru.chr8.1458 Acer truncatum HOM05D007235 ORTHO05D008985 4.7e-63 245.4 212 56.6
Gohir.A01G204900 Gossypium hirsutum HOM05D007235 ORTHO05D008985 4.7e-63 245.4 221 56.6
FvH4_6g19352 Fragaria vesca HOM05D007235 ORTHO05D008985 1.8e-62 243.4 216 57.9
CSS0010120 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 2.3e-62 243.0 213 54.5
CSS0012377 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 2.3e-62 243.0 213 54.5
Lj7C625T8 Lonicera japonica HOM05D007235 ORTHO05D008985 2.3e-62 243.0 212 57.5
CsaV3_6G040770 Cucumis sativus L. HOM05D007235 ORTHO05D008985 4.0e-62 242.3 210 58.1
Dinv31713 Davidia involucrata HOM05D007235 ORTHO05D008985 8.9e-62 241.1 212 55.2
FAN14G5756 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.2e-61 240.7 211 56.4
MD12G1029200 Malus domestica HOM05D007235 ORTHO05D008985 1.2e-61 240.7 208 55.3
CSS0040083 Camellia sinensis var. sinensis HOM05D007235 ORTHO05D008985 1.5e-61 240.4 213 53.5
CiPaw.10G011900 Carya illinoinensis HOM05D007235 ORTHO05D008985 1.5e-61 240.4 212 55.7
MELO3C024556.2 Cucumis melo HOM05D007235 ORTHO05D008985 4.4e-61 238.8 211 57.3
Dinv31712 Davidia involucrata HOM05D007235 ORTHO05D008985 4.4e-61 238.8 212 53.8
DCAR_007760 Daucus carota HOM05D007235 ORTHO05D008985 5.8e-61 238.4 211 55.5
Aqoxy2G01105 Aquilegia oxysepala HOM05D007235 ORTHO05D008985 7.5e-61 238.0 222 54.5
FvH4_6g19350 Fragaria vesca HOM05D007235 ORTHO05D008985 9.8e-61 237.7 211 55.9
Potri.006G210325 Populus trichocarpa HOM05D007235 ORTHO05D008985 2.9e-60 236.1 229 52.8
Cfa016637 Carpinus fangiana HOM05D007235 ORTHO05D008985 4.9e-60 235.3 230 52.6
HPP92_006812 Vanilla planifolia HOM05D007235 ORTHO05D008985 1.1e-59 234.2 213 54.5
FAN02G2734 Fragaria x ananassa HOM05D007235 ORTHO05D008985 4.1e-59 232.3 211 54.5
Lsat_1_v5_gn_9_21080 Lactuca sativa HOM05D007235 ORTHO05D008985 4.1e-59 232.3 236 49.6
SalBow3G1230 Salvia bowleyana HOM05D007235 ORTHO05D008985 4.1e-59 232.3 222 52.3
ClCG04G010150 Citrullus lanatus HOM05D007235 ORTHO05D008985 1.2e-58 230.7 212 54.2
Migut.J01007 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.2e-58 230.7 214 55.6
Lj2C141T11 Lonicera japonica HOM05D007235 ORTHO05D008985 1.2e-58 230.7 211 53.6
Ciclev10013621m.g Citrus clementina HOM05D007235 ORTHO05D008985 1.6e-58 230.3 215 54.0
Manes.09G053100 Manihot esculenta HOM05D007235 ORTHO05D008985 2.7e-58 229.6 212 54.7
Potri.006G210150 Populus trichocarpa HOM05D007235 ORTHO05D008985 1.0e-57 227.6 229 52.0
SalBow3G3787 Salvia bowleyana HOM05D007235 ORTHO05D008985 1.7e-57 226.9 211 54.0
Rhsim03G0070500 Rhododendron simsii HOM05D007235 ORTHO05D008985 2.3e-57 226.5 233 48.9
Rhsim03G0070400 Rhododendron simsii HOM05D007235 ORTHO05D008985 3.9e-57 225.7 240 50.4
Prupe.8G215200 Prunus persica HOM05D007235 ORTHO05D008985 1.4e-54 217.2 232 47.0
FAN02G0370 Fragaria x ananassa HOM05D007235 ORTHO05D008985 1.3e-52 210.7 213 53.1
Haze_19644 Corylus avellana HOM05D007235 ORTHO05D008985 3.2e-51 206.1 199 53.8
Sabra06G0161900 Salix brachista HOM05D007235 ORTHO05D008985 1.6e-50 203.8 195 55.4
Haze_19642 Corylus avellana HOM05D007235 ORTHO05D008985 1.1e-48 197.6 181 53.0
AagrBONN_evm.TU.Sc2ySwM_228.2009 Anthoceros agrestis HOM05D007235 ORTHO05D008985 7.3e-48 194.9 226 46.5
Mapoly0090s0057 Marchantia polymorpha HOM05D007235 ORTHO05D008985 5.2e-46 188.7 209 48.3
Rhsim03G0072800 Rhododendron simsii HOM05D007235 ORTHO05D008985 7.6e-45 184.9 248 41.1
Cfa016638 Carpinus fangiana HOM05D007235 ORTHO05D008985 8.7e-41 171.4 221 44.3
MD10G1176100 Malus domestica HOM05D007235 ORTHO05D008985 2.4e-35 153.3 250 37.6
ATR0820G010 Amborella trichopoda HOM05D007235 ORTHO05D008985 2.7e-34 149.8 134 52.2
QL07p038338 Quercus lobata HOM05D007235 ORTHO05D008985 1.1e-32 144.4 152 48.0
MBI17_g48245_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 2.5e-32 143.3 168 44.0
Thecc.05G094000 Theobroma cacao HOM05D007235 ORTHO05D008985 2.2e-28 130.2 211 41.2
MBI17_g41038_MAGBIO Magnolia biondii HOM05D007235 ORTHO05D008985 6.4e-28 128.6 124 48.4
DCAR_007761 Daucus carota HOM05D007235 ORTHO05D008985 1.6e-26 124.0 104 60.6
Cc06_g21800 Coffea canephora HOM05D007235 ORTHO05D008985 7.4e-24 115.2 151 39.7
Hma1.2p1_0769F.1_g215770 Hydrangea macrophylla HOM05D007235 ORTHO05D008985 1.6e-23 114.0 118 49.2
Cfa009503 Carpinus fangiana HOM05D007235 ORTHO05D008985 2.6e-21 106.7 226 34.1
QL07p038331 Quercus lobata HOM05D007235 ORTHO05D008985 9.3e-19 98.2 94 52.1
QL07p038319 Quercus lobata HOM05D007235 ORTHO05D008985 1.8e-17 94.0 70 62.9
Actinidia37302 Actinidia chinensis HOM05D007235 ORTHO05D008985 4.8e-15 85.9 80 52.5
Dinv28424 Davidia involucrata HOM05D007235 ORTHO05D008985 5.5e-11 72.4 76 43.4
Migut.J01009 Erythranthe guttata HOM05D007235 ORTHO05D008985 1.6e-10 70.9 100 37.0
PSO801G0111 Papaver somniferum HOM05D007235 ORTHO05D008985 3.5e-10 69.7 60 50.0
Dinv03307 Davidia involucrata HOM05D007235 ORTHO05D008985 2.3e-09 67.0 65 43.1
Duzib106G1334 Durio zibethinus HOM05D007235 ORTHO05D008985 3.0e-09 66.6 56 60.7
C07p56320 Brassica napus HOM05D001324 ORTHO05D001220 3.9e-09 66.2 213 30.5
A03p58290 Brassica napus HOM05D001324 ORTHO05D001220 5.1e-09 65.9 213 27.7
BolC7t46111H Brassica oleracea HOM05D001324 ORTHO05D001220 5.1e-09 65.9 213 28.2
Gohir.D01G194350 Gossypium hirsutum HOM05D007235 ORTHO05D008985 5.1e-09 65.9 70 47.1
BraA03t14892Z Brassica rapa HOM05D001324 ORTHO05D001220 6.7e-09 65.5 213 27.7
MD05G1193200 Malus domestica HOM05D001324 ORTHO05D001220 8.7e-09 65.1 214 29.4
Rhsim04G0176000 Rhododendron simsii HOM05D001324 ORTHO05D001220 8.7e-09 65.1 212 26.4
Hund03056 Selenicereus undatus HOM05D001324 ORTHO05D001220 1.1e-08 64.7 215 30.2
PGR031G0046 Punica granatum HOM05D001324 ORTHO05D001220 1.5e-08 64.3 227 27.8
PGR031G3556 Punica granatum HOM05D001324 ORTHO05D001220 1.5e-08 64.3 227 27.8
Ah.13g072610 Amaranthus hybridus HOM05D001324 ORTHO05D001220 1.9e-08 63.9 214 28.0
BcaC06g32611 Brassica carinata HOM05D001324 ORTHO05D001220 1.9e-08 63.9 235 26.8
PGR031G3279 Punica granatum HOM05D001324 ORTHO05D001220 1.9e-08 63.9 227 27.8
Eucgr.H00753 Eucalyptus grandis HOM05D001324 ORTHO05D001220 4.3e-08 62.8 228 25.9
CARHR003340 Cardamine hirsuta HOM05D001324 ORTHO05D001220 5.7e-08 62.4 229 28.8
Sp7g26560 Schrenkiella parvula HOM05D001324 ORTHO05D001220 5.7e-08 62.4 217 29.5
Lsat_1_v5_gn_2_39940 Lactuca sativa HOM05D001324 ORTHO05D001220 7.4e-08 62.0 208 26.9
RcHm_v2.0_Chr6g0287381 Rosa chinensis HOM05D001324 ORTHO05D001220 7.4e-08 62.0 222 27.0
arahy.Tifrunner.gnm1.ann1.5HI5D0 Arachis hypogaea HOM05D001324 ORTHO05D001220 9.7e-08 61.6 215 28.4
arahy.Tifrunner.gnm1.ann1.T6398M Arachis hypogaea HOM05D001324 ORTHO05D001220 9.7e-08 61.6 215 28.4
Glyma.12G132800 Glycine max HOM05D001324 ORTHO05D001220 9.7e-08 61.6 214 27.6
Pp3c14_16140 Physcomitrium patens HOM05D001324 ORTHO05D001220 9.7e-08 61.6 213 26.8
Solyc09g072610.3 Solanum lycopersicum HOM05D001324 ORTHO05D001220 9.7e-08 61.6 216 26.9
Aa31LG2G21800 Aethionema arabicum HOM05D001324 ORTHO05D001220 1.3e-07 61.2 209 26.8
A10p02500 Brassica napus HOM05D001324 ORTHO05D001220 1.3e-07 61.2 227 27.3
BraA10t42518Z Brassica rapa HOM05D001324 ORTHO05D001220 1.3e-07 61.2 225 27.1
ClCG07G001210 Citrullus lanatus HOM05D001324 ORTHO05D001220 1.3e-07 61.2 214 27.6
Migut.D00453 Erythranthe guttata HOM05D001324 ORTHO05D001220 1.3e-07 61.2 210 26.2
Phvul.011G136600 Phaseolus vulgaris HOM05D001324 ORTHO05D001220 1.3e-07 61.2 215 27.0
PGSC0003DMG400024294 Solanum tuberosum HOM05D001324 ORTHO05D001220 1.3e-07 61.2 214 26.6
HPP92_005128 Vanilla planifolia HOM05D001324 ORTHO05D001220 1.3e-07 61.2 215 27.4
CiPaw.03G267800 Carya illinoinensis HOM05D001324 ORTHO05D001220 1.6e-07 60.8 220 29.5
FAN20G0642 Fragaria x ananassa HOM05D001324 ORTHO05D001220 1.6e-07 60.8 214 27.1
Lsat_1_v5_gn_2_39740 Lactuca sativa HOM05D001324 ORTHO05D001220 1.6e-07 60.8 214 27.6
Sabra10G0038000 Salix brachista HOM05D001324 ORTHO05D001220 1.6e-07 60.8 209 29.2
CSS0025103 Camellia sinensis var. sinensis HOM05D001324 ORTHO05D001220 2.2e-07 60.5 211 28.4
CSS0032744 Camellia sinensis var. sinensis HOM05D001324 ORTHO05D001220 2.2e-07 60.5 211 28.4
Carub.0007s1210 Capsella rubella HOM05D001324 ORTHO05D001220 2.2e-07 60.5 207 27.1
CsaV3_3G028130 Cucumis sativus L. HOM05D001324 ORTHO05D001220 2.2e-07 60.5 213 27.7
DCAR_000925 Daucus carota HOM05D001324 ORTHO05D001220 2.2e-07 60.5 207 28.5
Sopen09g028420 Solanum pennellii HOM05D001324 ORTHO05D001220 2.2e-07 60.5 214 26.6
THA.LOC104808642 Tarenaya hassleriana HOM05D001324 ORTHO05D001220 2.2e-07 60.5 210 27.6
THA.LOC104820072 Tarenaya hassleriana HOM05D001324 ORTHO05D001220 2.2e-07 60.5 212 28.3
VMungo1127G0502 Vigna mungo HOM05D001324 ORTHO05D001220 2.2e-07 60.5 212 26.4
AT4G28570 Arabidopsis thaliana HOM05D001324 ORTHO05D001220 2.8e-07 60.1 216 28.2
MELO3C012854.2 Cucumis melo HOM05D001324 ORTHO05D001220 2.8e-07 60.1 211 28.9
Zm00001eb185040 Zea mays HOM05D001324 ORTHO05D001220 2.8e-07 60.1 211 26.5
MSTRG.18337 Avicennia marina HOM05D001324 ORTHO05D001220 3.7e-07 59.7 213 28.2
Thhalv10024496m.g Eutrema salsugineum HOM05D001324 ORTHO05D001220 3.7e-07 59.7 130 33.8
HPP92_008550 Vanilla planifolia HOM05D001324 ORTHO05D001220 3.7e-07 59.7 231 25.1
CANSAT78G1809 Cannabis sativa HOM05D001324 ORTHO05D001220 4.8e-07 59.3 207 27.5
FAN15G0508 Fragaria x ananassa HOM05D001324 ORTHO05D001220 4.8e-07 59.3 214 26.6
arahy.Tifrunner.gnm1.ann1.HX0053 Arachis hypogaea HOM05D001324 ORTHO05D001220 6.3e-07 58.9 245 25.7
arahy.Tifrunner.gnm1.ann1.YJKT09 Arachis hypogaea HOM05D001324 ORTHO05D001220 6.3e-07 58.9 244 25.0
ECA248G3225 Erigeron canadensis HOM05D001324 ORTHO05D001220 6.3e-07 58.9 206 26.7
FvH4_2g21000 Fragaria vesca HOM05D001324 ORTHO05D001220 6.3e-07 58.9 222 27.0
FAN24G1405 Fragaria x ananassa HOM05D001324 ORTHO05D001220 6.3e-07 58.9 222 27.0
FAN27G0459 Fragaria x ananassa HOM05D001324 ORTHO05D001220 6.3e-07 58.9 222 26.6
Phvul.010G070584 Phaseolus vulgaris HOM05D001324 ORTHO05D001220 6.3e-07 58.9 215 26.0
Psat3g057160 Pisum sativum HOM05D001324 ORTHO05D001220 6.3e-07 58.9 233 24.5
Prupe.8G219700 Prunus persica HOM05D001324 ORTHO05D001220 6.3e-07 58.9 214 26.6
QL09p040231 Quercus lobata HOM05D001324 ORTHO05D001220 6.3e-07 58.9 227 27.8
Aa31LG1G20820 Aethionema arabicum HOM05D001324 ORTHO05D001220 8.2e-07 58.5 227 27.3
AagrBONN_evm.TU.Sc2ySwM_117.3444 Anthoceros agrestis HOM05D001324 ORTHO05D001220 8.2e-07 58.5 229 27.5
CARHR236360 Cardamine hirsuta HOM05D001324 ORTHO05D001220 8.2e-07 58.5 217 27.2
Duzib138G0940 Durio zibethinus HOM05D001324 ORTHO05D001220 8.2e-07 58.5 208 26.4
Eucgr.K02114 Eucalyptus grandis HOM05D001324 ORTHO05D001220 8.2e-07 58.5 243 26.3
SMO196G0016 Selaginella moellendorffii HOM05D001324 ORTHO05D001220 8.2e-07 58.5 233 29.6
TPR.G9201 Trifolium pratense HOM05D001324 ORTHO05D001220 8.2e-07 58.5 233 24.0
Ciclev10013607m.g Citrus clementina HOM05D007235 ORTHO05D008985 1.1e-06 58.2 68 47.1
FvH4_2g21040 Fragaria vesca HOM05D001324 ORTHO05D001220 1.1e-06 58.2 219 26.5
Glyma.19G166500 Glycine max HOM05D001324 ORTHO05D001220 1.1e-06 58.2 207 26.6
Lalb_Chr03g0030061 Lupinus albus HOM05D001324 ORTHO05D001220 1.1e-06 58.2 213 27.2
SMO234G0068 Selaginella moellendorffii HOM05D001324 ORTHO05D001220 1.1e-06 58.2 233 29.6
Duzib151G0980 Durio zibethinus HOM05D001324 ORTHO05D001220 1.4e-06 57.8 213 28.2
PGR083G0140 Punica granatum HOM05D001324 ORTHO05D001220 1.4e-06 57.8 132 32.6
ATR0736G148 Amborella trichopoda HOM05D001324 ORTHO05D001220 1.8e-06 57.4 210 26.2
arahy.Tifrunner.gnm1.ann1.C4X96D Arachis hypogaea HOM05D001324 ORTHO05D001220 1.8e-06 57.4 238 26.9
BcaC05g24477 Brassica carinata HOM05D001324 ORTHO05D001220 1.8e-06 57.4 227 28.2
C05p02310 Brassica napus HOM05D001324 ORTHO05D001220 1.8e-06 57.4 228 26.8
Carub.0001s0315 Capsella rubella HOM05D001324 ORTHO05D001220 1.8e-06 57.4 228 27.2
CDE08G0157 Ceratophyllum demersum HOM05D001324 ORTHO05D001220 2.4e-06 57.0 232 25.9
Ca_18861_v3 Cicer arietinum L. HOM05D001324 ORTHO05D001220 2.4e-06 57.0 212 26.9
Medtr7g097210 Medicago truncatula HOM05D001324 ORTHO05D001220 2.4e-06 57.0 232 23.3
Phvul.001G162800 Phaseolus vulgaris HOM05D001324 ORTHO05D001220 2.4e-06 57.0 212 27.4
Sp1g02830 Schrenkiella parvula HOM05D001324 ORTHO05D001220 2.4e-06 57.0 225 27.6
AL1G13600 Arabidopsis lyrata HOM05D001324 ORTHO05D001220 3.1e-06 56.6 229 27.9
BolC7t41895H Brassica oleracea HOM05D001324 ORTHO05D001220 3.1e-06 56.6 208 26.9
Lj3g0018874 Lotus japonicus HOM05D001324 ORTHO05D001220 3.1e-06 56.6 214 28.0
Medtr0651s0010 Medicago truncatula HOM05D001324 ORTHO05D001220 3.1e-06 56.6 212 26.9
Medtr4g080890 Medicago truncatula HOM05D001324 ORTHO05D001220 3.1e-06 56.6 212 26.9
Sed0013034 Sechium edule HOM05D001324 ORTHO05D001220 3.1e-06 56.6 223 26.9
HPP92_002552 Vanilla planifolia HOM05D001324 ORTHO05D001220 3.1e-06 56.6 211 28.0
AT1G03990 Arabidopsis thaliana HOM05D001324 ORTHO05D001220 4.1e-06 56.2 231 26.8
EL10Ac3g04977 Beta vulgaris HOM05D001324 ORTHO05D001220 4.1e-06 56.2 208 27.4
CAN.G1078.7 Capsicum annuum HOM05D001324 ORTHO05D001220 4.1e-06 56.2 211 28.4
TAR623G1371 Trochodendron aralioides HOM05D007235 ORTHO05D008985 4.1e-06 56.2 31 74.2
C03p53160 Brassica napus HOM05D001324 ORTHO05D001220 5.3e-06 55.8 212 26.4
Ciclev10018992m.g Citrus clementina HOM05D001324 ORTHO05D001220 5.3e-06 55.8 208 28.8
Glyma.06G272200 Glycine max HOM05D001324 ORTHO05D001220 5.3e-06 55.8 123 35.0
PSO017G2391 Papaver somniferum HOM05D001324 ORTHO05D001220 5.3e-06 55.8 228 25.4
MSTRG.4149 Avicennia marina HOM05D001324 ORTHO05D001220 6.9e-06 55.5 229 24.9
CAN.G220.40 Capsicum annuum HOM05D001324 ORTHO05D001220 6.9e-06 55.5 229 24.5
AUR62015543 Chenopodium quinoa HOM05D001324 ORTHO05D001220 6.9e-06 55.5 208 27.4
HanXRQChr09g0264571 Helianthus annuus HOM05D001324 ORTHO05D001220 6.9e-06 55.5 209 26.3
Os02g0621800 Oryza sativa ssp. japonica HOM05D001324 ORTHO05D001220 6.9e-06 55.5 210 27.6
Potri.010G069100 Populus trichocarpa HOM05D001324 ORTHO05D001220 6.9e-06 55.5 215 27.9
Aa31LG8G9910 Aethionema arabicum HOM05D001324 ORTHO05D001220 9.0e-06 55.1 207 28.0
Nn3g19722 Nelumbo nucifera HOM05D001324 ORTHO05D001220 9.0e-06 55.1 241 26.1


User provided reference genes

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