Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12993 Sequoiadendron giganteum HOM05D006682 ORTHO05D008627 3.7e-146 521.5 271 100.0
C08p27040 Brassica napus HOM05D006682 ORTHO05D008627 1.0e-66 257.7 189 66.7
BcaB01g00476 Brassica carinata HOM05D006682 ORTHO05D008627 2.9e-66 256.1 189 66.1
A09p44960 Brassica napus HOM05D006682 ORTHO05D008627 2.9e-66 256.1 189 66.1
BolC8t50319H Brassica oleracea HOM05D006682 ORTHO05D008627 2.9e-66 256.1 189 66.1
BraA09t39955Z Brassica rapa HOM05D006682 ORTHO05D008627 2.9e-66 256.1 189 66.1
AL5G32250 Arabidopsis lyrata HOM05D006682 ORTHO05D008627 5.0e-66 255.4 184 67.4
Sp5g10480 Schrenkiella parvula HOM05D006682 ORTHO05D008627 6.5e-66 255.0 183 68.3
AT3G51790 Arabidopsis thaliana HOM05D006682 ORTHO05D008627 8.5e-66 254.6 184 66.8
Thhalv10010653m.g Eutrema salsugineum HOM05D006682 ORTHO05D008627 8.5e-66 254.6 189 66.7
THA.LOC104807019 Tarenaya hassleriana HOM05D006682 ORTHO05D008627 8.5e-66 254.6 189 67.2
Aa31sc655G20 Aethionema arabicum HOM05D006682 ORTHO05D008627 1.5e-65 253.8 176 68.8
BcaB01g00416 Brassica carinata HOM05D006682 ORTHO05D008627 3.2e-65 252.7 183 67.8
CARHR161420 Cardamine hirsuta HOM05D006682 ORTHO05D008627 7.2e-65 251.5 183 67.2
Manes.06G166600 Manihot esculenta HOM05D006682 ORTHO05D008627 1.6e-64 250.4 182 67.0
Nn3g18894 Nelumbo nucifera HOM05D006682 ORTHO05D008627 3.6e-64 249.2 177 69.5
PGR102G2323 Punica granatum HOM05D006682 ORTHO05D008627 4.7e-64 248.8 183 67.8
MELO3C015204.2 Cucumis melo HOM05D006682 ORTHO05D008627 8.0e-64 248.1 174 67.2
Eucgr.B03679 Eucalyptus grandis HOM05D006682 ORTHO05D008627 8.0e-64 248.1 183 66.7
CsaV3_1G042700 Cucumis sativus L. HOM05D006682 ORTHO05D008627 1.4e-63 247.3 174 67.2
CSS0008647 Camellia sinensis var. sinensis HOM05D006682 ORTHO05D008627 1.8e-63 246.9 177 67.2
TAR623G0191 Trochodendron aralioides HOM05D006682 ORTHO05D008627 2.3e-63 246.5 178 68.5
TAR623G0396 Trochodendron aralioides HOM05D006682 ORTHO05D008627 2.3e-63 246.5 178 68.5
Gohir.A01G228400 Gossypium hirsutum HOM05D006682 ORTHO05D008627 3.0e-63 246.1 175 66.9
Gohir.D01G218300 Gossypium hirsutum HOM05D006682 ORTHO05D008627 3.0e-63 246.1 175 66.9
Gorai.002G265000 Gossypium raimondii HOM05D006682 ORTHO05D008627 3.0e-63 246.1 175 66.9
MD03G1024200 Malus domestica HOM05D006682 ORTHO05D008627 3.0e-63 246.1 184 65.8
MD11G1029300 Malus domestica HOM05D006682 ORTHO05D008627 5.2e-63 245.4 182 65.9
FAN16G2773 Fragaria x ananassa HOM05D006682 ORTHO05D008627 6.8e-63 245.0 178 67.4
Lalb_Chr08g0245621 Lupinus albus HOM05D006682 ORTHO05D008627 6.8e-63 245.0 180 65.6
FAN11G1823 Fragaria x ananassa HOM05D006682 ORTHO05D008627 8.8e-63 244.6 178 67.4
Sed0028089 Sechium edule HOM05D006682 ORTHO05D008627 8.8e-63 244.6 179 64.8
FvH4_3g43060 Fragaria vesca HOM05D006682 ORTHO05D008627 1.2e-62 244.2 178 67.4
FAN21G3201 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.2e-62 244.2 178 67.4
FAN25G2895 Fragaria x ananassa HOM05D006682 ORTHO05D008627 1.2e-62 244.2 178 67.4
Prupe.6G023600 Prunus persica HOM05D006682 ORTHO05D008627 1.2e-62 244.2 186 65.1
Aqoxy2G00055 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.5e-62 243.8 176 67.0
arahy.Tifrunner.gnm1.ann1.1N3H6Z Arachis hypogaea HOM05D006682 ORTHO05D008627 2.0e-62 243.4 194 62.4
ClCG03G013350 Citrullus lanatus HOM05D006682 ORTHO05D008627 2.0e-62 243.4 175 65.1
Dinv36276 Davidia involucrata HOM05D006682 ORTHO05D008627 2.0e-62 243.4 176 65.9
Sc16g0009700 Simmondsia chinensis HOM05D006682 ORTHO05D008627 2.0e-62 243.4 181 68.5
RcHm_v2.0_Chr5g0077121 Rosa chinensis HOM05D006682 ORTHO05D008627 2.6e-62 243.0 178 66.9
CANSAT80G0450 Cannabis sativa HOM05D006682 ORTHO05D008627 3.4e-62 242.7 175 68.0
Cpa.g.sc21.74 Carica papaya HOM05D006682 ORTHO05D008627 3.4e-62 242.7 175 65.7
MBI13_g31544_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 3.4e-62 242.7 190 64.7
Haze_23101 Corylus avellana HOM05D006682 ORTHO05D008627 4.4e-62 242.3 176 65.3
Thecc.05G010600 Theobroma cacao HOM05D006682 ORTHO05D008627 4.4e-62 242.3 175 65.1
Lj1A355T5 Lonicera japonica HOM05D006682 ORTHO05D008627 5.7e-62 241.9 171 66.7
Duzib128G1702 Durio zibethinus HOM05D006682 ORTHO05D008627 7.5e-62 241.5 175 65.1
arahy.Tifrunner.gnm1.ann1.11YZMF Arachis hypogaea HOM05D006682 ORTHO05D008627 1.3e-61 240.7 185 64.3
EL10Ac3g05849 Beta vulgaris HOM05D006682 ORTHO05D008627 1.7e-61 240.4 178 67.4
Cpa.g.sc12.111 Carica papaya HOM05D006682 ORTHO05D008627 1.7e-61 240.4 177 64.4
CiPaw.13G163300 Carya illinoinensis HOM05D006682 ORTHO05D008627 3.7e-61 239.2 176 64.2
Ciclev10012386m.g Citrus clementina HOM05D006682 ORTHO05D008627 3.7e-61 239.2 175 66.3
Cfa009742 Carpinus fangiana HOM05D006682 ORTHO05D008627 4.8e-61 238.8 176 64.8
COL.COLO4_14494 Corchorus olitorius HOM05D006682 ORTHO05D008627 4.8e-61 238.8 175 64.0
Glyma.11G132200 Glycine max HOM05D006682 ORTHO05D008627 1.1e-60 237.7 181 63.5
VMungo1127G1130 Vigna mungo HOM05D006682 ORTHO05D008627 1.4e-60 237.3 185 61.6
Ah.13g066750 Amaranthus hybridus HOM05D006682 ORTHO05D008627 1.8e-60 236.9 192 63.0
ATR0605G320 Amborella trichopoda HOM05D006682 ORTHO05D008627 1.8e-60 236.9 189 62.4
Manes.14G001136 Manihot esculenta HOM05D006682 ORTHO05D008627 2.4e-60 236.5 181 64.1
Lj3g0017048 Lotus japonicus HOM05D006682 ORTHO05D008627 3.1e-60 236.1 188 62.8
TWI38G0692 Tripterygium wilfordii HOM05D006682 ORTHO05D008627 3.1e-60 236.1 177 65.0
CDE03G0115 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 4.1e-60 235.7 175 61.7
Glyma.12G056800 Glycine max HOM05D006682 ORTHO05D008627 4.1e-60 235.7 181 63.0
Hma1.2p1_0401F.1_g144700 Hydrangea macrophylla HOM05D006682 ORTHO05D008627 5.4e-60 235.3 173 66.5
Phvul.011G058400 Phaseolus vulgaris HOM05D006682 ORTHO05D008627 5.4e-60 235.3 180 62.2
Rhsim13G0223700 Rhododendron simsii HOM05D006682 ORTHO05D008627 1.2e-59 234.2 180 64.4
CDE04G1557 Ceratophyllum demersum HOM05D006682 ORTHO05D008627 1.6e-59 233.8 175 61.7
Ca_20573_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 1.6e-59 233.8 170 64.7
Ca_30508_v3 Cicer arietinum L. HOM05D006682 ORTHO05D008627 1.6e-59 233.8 170 64.7
Psat7g213040 Pisum sativum HOM05D006682 ORTHO05D008627 1.6e-59 233.8 178 62.4
Actinidia16314 Actinidia chinensis HOM05D006682 ORTHO05D008627 2.0e-59 233.4 176 63.6
ECA233G5908 Erigeron canadensis HOM05D006682 ORTHO05D008627 3.5e-59 232.6 187 62.0
QL01p005270 Quercus lobata HOM05D006682 ORTHO05D008627 3.5e-59 232.6 175 63.4
Sabra03G0151700 Salix brachista HOM05D006682 ORTHO05D008627 7.7e-59 231.5 175 64.0
Lsat_1_v5_gn_8_74980 Lactuca sativa HOM05D006682 ORTHO05D008627 1.3e-58 230.7 171 64.3
Medtr4g065610 Medicago truncatula HOM05D006682 ORTHO05D008627 1.3e-58 230.7 183 59.0
Potri.003G205200 Populus trichocarpa HOM05D006682 ORTHO05D008627 2.3e-58 229.9 175 62.9
MSTRG.18416 Avicennia marina HOM05D006682 ORTHO05D008627 5.0e-58 228.8 187 63.1
SHI11277 Sapria himalayana HOM05D006682 ORTHO05D008627 9.5e-57 224.6 174 62.6
HPP92_017841 Vanilla planifolia HOM05D006682 ORTHO05D008627 1.2e-56 224.2 200 59.5
Os10g0545800 Oryza sativa ssp. japonica HOM05D006682 ORTHO05D008627 2.1e-56 223.4 179 62.6
Cc00_g20370 Coffea canephora HOM05D006682 ORTHO05D008627 6.1e-56 221.9 186 60.2
SGA_v2.0_scaffold42G16114 Striga asiatica HOM05D006682 ORTHO05D008627 6.1e-56 221.9 192 56.8
Zm00001eb022720 Zea mays HOM05D006682 ORTHO05D008627 1.4e-55 220.7 175 62.9
Pp3c14_20080 Physcomitrium patens HOM05D006682 ORTHO05D008627 4.0e-55 219.2 206 55.3
SalBow5G1085 Salvia bowleyana HOM05D006682 ORTHO05D008627 8.9e-55 218.0 189 59.3
SalBow8G0417 Salvia bowleyana HOM05D006682 ORTHO05D008627 8.9e-55 218.0 189 59.3
DCAR_014742 Daucus carota HOM05D006682 ORTHO05D008627 2.6e-54 216.5 163 63.8
SGA_v2.0_scaffold4G02325 Striga asiatica HOM05D006682 ORTHO05D008627 5.7e-54 215.3 185 57.3
Zm00001eb394030 Zea mays HOM05D006682 ORTHO05D008627 7.5e-54 214.9 206 55.3
Solyc09g005870.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 1.3e-53 214.2 183 57.9
Migut.O00578 Erythranthe guttata HOM05D006682 ORTHO05D008627 1.7e-53 213.8 180 58.9
PSO384G2735 Papaver somniferum HOM05D006682 ORTHO05D008627 2.2e-53 213.4 177 57.1
CAN.G350.11 Capsicum annuum HOM05D006682 ORTHO05D008627 3.7e-53 212.6 195 54.9
Nitab4.5_0002026g0020 Nicotiana tabacum HOM05D006682 ORTHO05D008627 3.7e-53 212.6 175 60.0
Mapoly0003s0021 Marchantia polymorpha HOM05D006682 ORTHO05D008627 4.9e-53 212.2 194 57.7
PGSC0003DMG400023913 Solanum tuberosum HOM05D006682 ORTHO05D008627 4.9e-53 212.2 195 54.4
PSO339G5979 Papaver somniferum HOM05D006682 ORTHO05D008627 6.3e-53 211.8 177 56.5
Solyc03g033990.1 Solanum lycopersicum HOM05D006682 ORTHO05D008627 8.3e-53 211.5 183 57.4
Sopen03g006750 Solanum pennellii HOM05D006682 ORTHO05D008627 8.3e-53 211.5 183 57.4
Sopen09g001750 Solanum pennellii HOM05D006682 ORTHO05D008627 1.8e-52 210.3 183 56.8
PGSC0003DMG400009816 Solanum tuberosum HOM05D006682 ORTHO05D008627 5.4e-52 208.8 183 56.8
Lj3P268T21 Lonicera japonica HOM05D006682 ORTHO05D008627 2.0e-51 206.8 165 61.8
AUR62015492 Chenopodium quinoa HOM05D006682 ORTHO05D008627 1.1e-49 201.1 165 61.8
TPR.G35025 Trifolium pratense HOM05D006682 ORTHO05D008627 5.6e-49 198.7 174 54.6
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 2.4e-44 183.3 162 57.4
Psat7g244600 Pisum sativum HOM05D006682 ORTHO05D008627 4.6e-43 179.1 150 55.3
unitig_26.g10134 Utricularia gibba HOM05D006682 ORTHO05D008627 1.1e-41 174.5 182 52.7
HanXRQChr17g0534121 Helianthus annuus HOM05D006682 ORTHO05D008627 8.3e-37 158.3 107 68.2
Nitab4.5_0000492g0110 Nicotiana tabacum HOM05D006682 ORTHO05D008627 2.0e-22 110.5 94 58.5
GSVIVG01025303001 Vitis vinifera HOM05D006682 ORTHO05D008627 3.4e-22 109.8 94 59.6
EL10Ac6g14324 Beta vulgaris HOM05D006682 ORTHO05D007363 9.6e-17 91.7 74 58.1
CBR_g49935 Chara braunii HOM05D000019 ORTHO05D000048 9.6e-17 91.7 122 45.9
Carub.0005s1814 Capsella rubella HOM05D006682 ORTHO05D008627 2.1e-16 90.5 67 61.2
CBR_g49937 Chara braunii HOM05D000019 ORTHO05D000002 4.4e-14 82.8 74 47.3
MBI13_g31542_MAGBIO Magnolia biondii HOM05D006682 ORTHO05D008627 7.6e-14 82.0 71 52.1
Actinidia06890 Actinidia chinensis HOM05D006682 ORTHO05D054450 1.4e-07 61.2 62 48.4
Aqoxy4G00577 Aquilegia oxysepala HOM05D006682 ORTHO05D008627 1.5e-06 57.8 45 62.2
Peaxi162Scf00029g00296 Petunia axillaris HOM05D006682 ORTHO05D008627 2.6e-06 57.0 51 52.9


User provided reference genes

Program Settings