Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12986 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.5e-144 515.4 255 100.0
SEGI_10836 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 8.5e-116 420.6 338 66.9
SEGI_09994 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-61 240.4 148 81.1
SEGI_21118 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.6e-61 240.4 148 81.1
SEGI_20620 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.6e-61 238.8 160 75.0
SEGI_41100 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.4e-55 218.4 148 73.6
SEGI_26119 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-53 213.0 138 77.5
SEGI_01451 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.3e-52 209.9 137 76.6
SEGI_22494 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.5e-51 204.5 126 79.4
SEGI_17593 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.1e-49 201.1 134 73.1
SEGI_21703 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.2e-46 188.0 134 71.6
SEGI_37648 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.6e-43 177.9 110 82.7
SEGI_32072 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 2.7e-37 159.8 95 81.1
ATR0743G251 Amborella trichopoda HOM05D003580 ORTHO05D004441 3.0e-36 156.4 148 50.7
MBI18_g04901_MAGBIO Magnolia biondii HOM05D003580 ORTHO05D004441 2.5e-35 153.3 146 51.4
SEGI_18317 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.3e-35 152.9 98 77.6
SEGI_13143 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.6e-35 151.4 105 75.2
SEGI_24255 Sequoiadendron giganteum HOM05D000018 ORTHO05D003948 9.6e-35 151.4 103 71.8
PSO063G3475 Papaver somniferum HOM05D003580 ORTHO05D004441 1.4e-33 147.5 140 51.4
Aqoxy6G00271 Aquilegia oxysepala HOM05D003580 ORTHO05D004441 1.8e-33 147.1 140 50.0
SEGI_00546 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.8e-33 147.1 111 68.5
CDE04G2219 Ceratophyllum demersum HOM05D003580 ORTHO05D004441 4.0e-33 146.0 135 51.9
PSO675G0774 Papaver somniferum HOM05D003580 ORTHO05D004441 6.9e-33 145.2 134 53.7
SEGI_37860 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.2e-32 144.4 103 68.9
SEGI_00259 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.5e-32 144.1 95 75.8
GSVIVG01006267001 Vitis vinifera HOM05D003580 ORTHO05D004441 2.0e-32 143.7 140 51.4
Cc06_g21420 Coffea canephora HOM05D003580 ORTHO05D004441 2.6e-32 143.3 134 51.5
PSO732G0238 Papaver somniferum HOM05D003580 ORTHO05D004441 3.4e-32 142.9 134 53.0
TAR633G0565 Trochodendron aralioides HOM05D003580 ORTHO05D004441 3.4e-32 142.9 140 50.0
Solyc03g120700.3 Solanum lycopersicum HOM05D003580 ORTHO05D004441 4.4e-32 142.5 134 51.5
Sopen03g039520 Solanum pennellii HOM05D003580 ORTHO05D004441 4.4e-32 142.5 134 51.5
PGSC0003DMG400002624 Solanum tuberosum HOM05D003580 ORTHO05D004441 7.6e-32 141.7 134 51.5
TAR362G0544 Trochodendron aralioides HOM05D003580 ORTHO05D004441 7.6e-32 141.7 136 50.0
TWI53G0960 Tripterygium wilfordii HOM05D003580 ORTHO05D004441 9.9e-32 141.4 146 46.6
Nn1g09424 Nelumbo nucifera HOM05D003580 ORTHO05D004441 1.3e-31 141.0 146 46.6
Rhsim04G0086300 Rhododendron simsii HOM05D003580 ORTHO05D004441 1.7e-31 140.6 146 47.9
SEGI_23236 Sequoiadendron giganteum HOM05D003580 ORTHO05D000001 2.9e-31 139.8 98 71.4
SGA_v2.0_scaffold31G12887 Striga asiatica HOM05D003580 ORTHO05D004441 2.9e-31 139.8 198 42.4
Eucgr.G00871 Eucalyptus grandis HOM05D003580 ORTHO05D004441 4.9e-31 139.0 170 45.9
Prupe.1G575000 Prunus persica HOM05D003580 ORTHO05D004441 4.9e-31 139.0 134 50.7
SGA_v2.0_scaffold31G12889 Striga asiatica HOM05D003580 ORTHO05D004441 6.4e-31 138.7 140 49.3
Peaxi162Scf00076g00824 Petunia axillaris HOM05D003580 ORTHO05D004441 1.1e-30 137.9 134 50.0
SGA_v2.0_scaffold13G06689 Striga asiatica HOM05D003580 ORTHO05D004441 1.1e-30 137.9 140 49.3
Ciclev10014110m.g Citrus clementina HOM05D003580 ORTHO05D004441 1.4e-30 137.5 146 45.9
CAN.G438.18 Capsicum annuum HOM05D003580 ORTHO05D004441 2.4e-30 136.7 134 49.3
MD08G1237500 Malus domestica HOM05D003580 ORTHO05D004441 2.4e-30 136.7 134 50.0
Sabra10G0136200 Salix brachista HOM05D003580 ORTHO05D004441 3.2e-30 136.3 146 47.3
CANSAT64G0454 Cannabis sativa HOM05D003580 ORTHO05D004441 4.2e-30 136.0 134 50.0
Potri.010G177200 Populus trichocarpa HOM05D003580 ORTHO05D004441 4.2e-30 136.0 146 46.6
PGR042G2902 Punica granatum HOM05D003580 ORTHO05D004441 4.2e-30 136.0 135 49.6
vmacro09152 Vaccinium macrocarpon HOM05D003580 ORTHO05D004441 4.2e-30 136.0 134 47.8
HanXRQChr01g0024861 Helianthus annuus HOM05D003580 ORTHO05D004441 5.4e-30 135.6 147 48.3
Nn5g28173 Nelumbo nucifera HOM05D003580 ORTHO05D004441 5.4e-30 135.6 140 47.1
Hund21939 Selenicereus undatus HOM05D003580 ORTHO05D004441 5.4e-30 135.6 146 46.6
MD15G1429400 Malus domestica HOM05D003580 ORTHO05D004441 7.1e-30 135.2 134 48.5
Mapoly0006s0304 Marchantia polymorpha HOM05D003580 ORTHO05D004441 9.3e-30 134.8 131 48.9
Psat6g176280 Pisum sativum HOM05D003580 ORTHO05D004441 9.3e-30 134.8 146 45.9
AUR62006600 Chenopodium quinoa HOM05D003580 ORTHO05D004441 1.6e-29 134.0 159 44.7
Sabra08G0059400 Salix brachista HOM05D003580 ORTHO05D004441 1.6e-29 134.0 146 45.9
Ah.04g159420 Amaranthus hybridus HOM05D003580 ORTHO05D004441 2.1e-29 133.7 185 41.6
Cpa.g.sc440.1 Carica papaya HOM05D003580 ORTHO05D004441 2.1e-29 133.7 146 43.8
AUR62000253 Chenopodium quinoa HOM05D003580 ORTHO05D004441 2.1e-29 133.7 146 46.6
COL.COLO4_02821 Corchorus olitorius HOM05D003580 ORTHO05D004441 2.1e-29 133.7 135 47.4
Migut.J00662 Erythranthe guttata HOM05D003580 ORTHO05D004441 2.1e-29 133.7 146 46.6
Glyma.20G188500 Glycine max HOM05D003580 ORTHO05D004441 2.1e-29 133.7 146 45.9
AT5G16300 Arabidopsis thaliana HOM05D003580 ORTHO05D004441 2.7e-29 133.3 146 45.9
HanXRQChr12g0356901 Helianthus annuus HOM05D003580 ORTHO05D004441 2.7e-29 133.3 146 47.9
Lj2A356T45 Lonicera japonica HOM05D003580 ORTHO05D004441 2.7e-29 133.3 146 44.5
Medtr1g492710 Medicago truncatula HOM05D003580 ORTHO05D004441 2.7e-29 133.3 146 45.2
Sed0017385 Sechium edule HOM05D003580 ORTHO05D004441 2.7e-29 133.3 134 47.0
HPP92_017521 Vanilla planifolia HOM05D003580 ORTHO05D004441 2.7e-29 133.3 140 47.9
RcHm_v2.0_Chr7g0220971 Rosa chinensis HOM05D003580 ORTHO05D004441 3.5e-29 132.9 207 38.6
MSTRG.19281 Avicennia marina HOM05D003580 ORTHO05D004441 4.6e-29 132.5 140 49.3
Lalb_Chr02g0151301 Lupinus albus HOM05D003580 ORTHO05D004441 4.6e-29 132.5 146 44.5
Glyma.10G201900 Glycine max HOM05D003580 ORTHO05D004441 6.0e-29 132.1 146 45.9
Oeu011931.1 Olea europaea HOM05D003580 ORTHO05D004441 6.0e-29 132.1 134 49.3
Sed0022441 Sechium edule HOM05D003580 ORTHO05D004441 6.0e-29 132.1 174 39.7
Actinidia30566 Actinidia chinensis HOM05D003580 ORTHO05D004441 7.9e-29 131.7 135 48.9
ClCG11G011150 Citrullus lanatus HOM05D003580 ORTHO05D004441 7.9e-29 131.7 135 46.7
Thhalv10012518m.g Eutrema salsugineum HOM05D003580 ORTHO05D004441 7.9e-29 131.7 146 46.6
Gohir.A05G405500 Gossypium hirsutum HOM05D003580 ORTHO05D004441 7.9e-29 131.7 146 44.5
Lsat_1_v5_gn_1_58860 Lactuca sativa HOM05D003580 ORTHO05D004441 7.9e-29 131.7 147 45.6
CsaV3_2G009280 Cucumis sativus L. HOM05D003580 ORTHO05D004441 1.0e-28 131.3 135 45.9
Duzib140G0001 Durio zibethinus HOM05D003580 ORTHO05D004441 1.0e-28 131.3 173 41.0
FvH4_5g28760 Fragaria vesca HOM05D003580 ORTHO05D004441 1.0e-28 131.3 134 48.5
FAN18G2191 Fragaria x ananassa HOM05D003580 ORTHO05D004441 1.0e-28 131.3 134 48.5
Gorai.012G011900 Gossypium raimondii HOM05D003580 ORTHO05D004441 1.0e-28 131.3 146 44.5
Phvul.007G105200 Phaseolus vulgaris HOM05D003580 ORTHO05D004441 1.0e-28 131.3 146 44.5
Potri.008G079700 Populus trichocarpa HOM05D003580 ORTHO05D004441 1.0e-28 131.3 146 45.2
Sc16g0010760 Simmondsia chinensis HOM05D003580 ORTHO05D004441 1.0e-28 131.3 147 44.9
TPR.G2546 Trifolium pratense HOM05D003580 ORTHO05D004441 1.0e-28 131.3 146 44.5
VMungo0720G1645 Vigna mungo HOM05D003580 ORTHO05D004441 1.0e-28 131.3 146 43.8
Actinidia22096 Actinidia chinensis HOM05D003580 ORTHO05D004441 1.3e-28 131.0 135 48.9
EL10Ac4g10045 Beta vulgaris HOM05D003580 ORTHO05D004441 1.3e-28 131.0 159 43.4
Ca_10488_v3 Cicer arietinum L. HOM05D003580 ORTHO05D004441 1.3e-28 131.0 146 45.2
Lj5g0021899 Lotus japonicus HOM05D003580 ORTHO05D004441 1.3e-28 131.0 188 38.3
SEGI_10162 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 1.3e-28 131.0 74 85.1
Aa31LG11G13320 Aethionema arabicum HOM05D003580 ORTHO05D004441 1.7e-28 130.6 182 39.0
Gohir.D04G010100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.7e-28 130.6 146 44.5
MELO3C008782.2 Cucumis melo HOM05D003580 ORTHO05D004441 2.3e-28 130.2 135 45.9
unitig_749.g14304 Utricularia gibba HOM05D003580 ORTHO05D004441 2.3e-28 130.2 193 39.9
arahy.Tifrunner.gnm1.ann1.TPGZ8P Arachis hypogaea HOM05D003580 ORTHO05D004441 3.0e-28 129.8 147 43.5
arahy.Tifrunner.gnm1.ann1.U0AKQE Arachis hypogaea HOM05D003580 ORTHO05D004441 3.0e-28 129.8 147 43.5
Carub.0006s1449 Capsella rubella HOM05D003580 ORTHO05D004441 3.0e-28 129.8 146 45.9
ECA248G2481 Erigeron canadensis HOM05D003580 ORTHO05D004441 3.9e-28 129.4 147 45.6
Oeu055491.1 Olea europaea HOM05D003580 ORTHO05D004441 3.9e-28 129.4 134 47.8
SEGI_07846 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 3.9e-28 129.4 83 77.1
FAN08G0025 Fragaria x ananassa HOM05D003580 ORTHO05D004441 5.1e-28 129.0 207 37.2
Lalb_Chr21g0313231 Lupinus albus HOM05D003580 ORTHO05D004441 5.1e-28 129.0 146 43.8
Manes.13G155600 Manihot esculenta HOM05D003580 ORTHO05D004441 5.1e-28 129.0 146 43.2
QL01p005312 Quercus lobata HOM05D003580 ORTHO05D004441 6.6e-28 128.6 146 44.5
Sp6g27860 Schrenkiella parvula HOM05D003580 ORTHO05D004441 6.6e-28 128.6 146 44.5
AL6G27200 Arabidopsis lyrata HOM05D003580 ORTHO05D004441 8.7e-28 128.3 181 38.7
FAN13G3018 Fragaria x ananassa HOM05D003580 ORTHO05D004441 8.7e-28 128.3 134 47.8
Gohir.D05G331100 Gossypium hirsutum HOM05D003580 ORTHO05D004441 8.7e-28 128.3 173 39.9
Gorai.009G355000 Gossypium raimondii HOM05D003580 ORTHO05D004441 8.7e-28 128.3 173 39.9
Pp3c18_6580 Physcomitrium patens HOM05D003580 ORTHO05D004441 8.7e-28 128.3 131 45.0
BcaB01g04993 Brassica carinata HOM05D003580 ORTHO05D004441 1.1e-27 127.9 146 44.5
Dinv14589 Davidia involucrata HOM05D003580 ORTHO05D004441 1.1e-27 127.9 146 43.8
A10p22770 Brassica napus HOM05D003580 ORTHO05D004441 1.5e-27 127.5 146 45.2
Pp3c21_18130 Physcomitrium patens HOM05D003580 ORTHO05D004441 1.5e-27 127.5 144 42.4
CARHR197010 Cardamine hirsuta HOM05D003580 ORTHO05D004441 1.9e-27 127.1 146 42.5
Cfa002307 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.9e-27 127.1 134 47.0
Cfa002308 Carpinus fangiana HOM05D003580 ORTHO05D004441 1.9e-27 127.1 134 47.0
Haze_24513 Corylus avellana HOM05D003580 ORTHO05D004441 1.9e-27 127.1 134 47.0
Gohir.A04G049300 Gossypium hirsutum HOM05D003580 ORTHO05D004441 1.9e-27 127.1 173 39.3
CiPaw.04G180400 Carya illinoinensis HOM05D003580 ORTHO05D004441 2.5e-27 126.7 135 46.7
DCAR_019887 Daucus carota HOM05D003580 ORTHO05D004441 3.3e-27 126.3 134 45.5
FAN04G1111 Fragaria x ananassa HOM05D003580 ORTHO05D004441 3.3e-27 126.3 207 36.7
C09p60740 Brassica napus HOM05D003580 ORTHO05D004441 4.3e-27 125.9 146 44.5
BolC9t58909H Brassica oleracea HOM05D003580 ORTHO05D004441 4.3e-27 125.9 146 44.5
THA.LOC104820933 Tarenaya hassleriana HOM05D003580 ORTHO05D004441 5.6e-27 125.6 147 40.8
SEGI_02603 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 9.6e-27 124.8 72 83.3
BraA10t44342Z Brassica rapa HOM05D003580 ORTHO05D004441 2.1e-26 123.6 146 44.5
A03p07660 Brassica napus HOM05D003580 ORTHO05D004441 1.4e-25 120.9 146 41.8
BraA03t10094Z Brassica rapa HOM05D003580 ORTHO05D004441 1.4e-25 120.9 146 41.8
C03p08900 Brassica napus HOM05D003580 ORTHO05D004441 1.8e-25 120.6 146 42.5
BolC3t13385H Brassica oleracea HOM05D003580 ORTHO05D004441 1.8e-25 120.6 146 42.5
AagrBONN_evm.TU.Sc2ySwM_228.612 Anthoceros agrestis HOM05D003580 ORTHO05D004441 2.4e-25 120.2 149 43.0
Os01g0777000 Oryza sativa ssp. japonica HOM05D003580 ORTHO05D004441 2.4e-25 120.2 140 44.3
SEGI_40013 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 6.9e-25 118.6 80 71.2
SEGI_40357 Sequoiadendron giganteum HOM05D003580 ORTHO05D000003 5.8e-24 115.5 85 68.2
CSS0030366 Camellia sinensis var. sinensis HOM05D003580 ORTHO05D004441 9.9e-24 114.8 146 41.8
Zm00001eb151630 Zea mays HOM05D003580 ORTHO05D004441 9.9e-24 114.8 142 43.0
Thecc.05G131900 Theobroma cacao HOM05D003580 ORTHO05D004441 2.2e-23 113.6 154 40.9
SHI02481 Sapria himalayana HOM05D003580 ORTHO05D004441 2.4e-22 110.2 135 40.7
Zm00001eb369950 Zea mays HOM05D003580 ORTHO05D004441 5.4e-22 109.0 142 40.1
Dinv20243 Davidia involucrata HOM05D003580 ORTHO05D004441 7.1e-22 108.6 127 42.5
CBR_g38826 Chara braunii HOM05D000019 ORTHO05D000048 3.5e-21 106.3 180 34.4
SMO116G0219 Selaginella moellendorffii HOM05D003580 ORTHO05D004441 1.8e-20 104.0 160 40.0
Eucgr.A01176 Eucalyptus grandis HOM05D003580 ORTHO05D004441 1.5e-19 100.9 131 41.2
Atru.chr10.123 Acer truncatum HOM05D003580 ORTHO05D004441 6.2e-18 95.5 88 51.1
SEGI_40445 Sequoiadendron giganteum HOM05D003580 ORTHO05D004441 4.5e-16 89.4 58 79.3
SEGI_06299 Sequoiadendron giganteum HOM05D003580 ORTHO05D019257 1.0e-12 78.2 41 87.8
Atru.chr10.105 Acer truncatum HOM05D003580 ORTHO05D004441 1.9e-06 57.4 40 65.0


User provided reference genes

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