Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12949 Sequoiadendron giganteum HOM05D007288 ORTHO05D009200 1.0e-41 172.9 84 100.0
ATR0594G195 Amborella trichopoda HOM05D007288 ORTHO05D009200 1.7e-25 119.0 81 66.7
FAN16G0816 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.4e-22 109.4 81 64.2
MSTRG.12620 Avicennia marina HOM05D007288 ORTHO05D009200 1.8e-22 109.0 81 64.2
FAN21G3325 Fragaria x ananassa HOM05D007288 ORTHO05D009200 1.8e-22 109.0 81 64.2
PSO339G6024 Papaver somniferum HOM05D007288 ORTHO05D009200 2.3e-22 108.6 81 61.7
FvH4_3g33990 Fragaria vesca HOM05D007288 ORTHO05D009200 4.0e-22 107.8 81 63.0
MD11G1120900 Malus domestica HOM05D007288 ORTHO05D009200 5.2e-22 107.5 81 61.7
Phvul.L000462 Phaseolus vulgaris HOM05D007288 ORTHO05D009200 6.8e-22 107.1 81 58.0
FAN11G2413 Fragaria x ananassa HOM05D007288 ORTHO05D009200 8.9e-22 106.7 81 61.7
Glyma.15G044300 Glycine max HOM05D007288 ORTHO05D009200 1.2e-21 106.3 81 56.8
Lj2A1042T48 Lonicera japonica HOM05D007288 ORTHO05D009200 1.2e-21 106.3 81 64.2
QL01p035799 Quercus lobata HOM05D007288 ORTHO05D009200 1.2e-21 106.3 81 63.0
RcHm_v2.0_Chr5g0061521 Rosa chinensis HOM05D007288 ORTHO05D009200 1.5e-21 105.9 81 61.7
Lj3g0012395 Lotus japonicus HOM05D007288 ORTHO05D009200 2.0e-21 105.5 81 59.3
TAR623G1771 Trochodendron aralioides HOM05D007288 ORTHO05D009200 2.0e-21 105.5 81 63.0
Medtr2g093050 Medicago truncatula HOM05D007288 ORTHO05D009200 2.6e-21 105.1 81 59.3
SalBow3G3212 Salvia bowleyana HOM05D007288 ORTHO05D009200 2.6e-21 105.1 81 64.2
Nitab4.5_0004512g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 4.4e-21 104.4 79 64.6
Nitab4.5_0014946g0010 Nicotiana tabacum HOM05D007288 ORTHO05D009200 4.4e-21 104.4 79 64.6
VMungo1080G1892 Vigna mungo HOM05D007288 ORTHO05D009200 4.4e-21 104.4 81 58.0
Actinidia00813 Actinidia chinensis HOM05D007288 ORTHO05D009200 5.8e-21 104.0 81 60.5
Haze_23956 Corylus avellana HOM05D007288 ORTHO05D009200 5.8e-21 104.0 81 61.7
PSO384G1093 Papaver somniferum HOM05D007288 ORTHO05D009200 5.8e-21 104.0 81 59.3
Psat5g276680 Pisum sativum HOM05D007288 ORTHO05D009200 5.8e-21 104.0 81 58.0
Aqoxy4G03169 Aquilegia oxysepala HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 63.0
arahy.Tifrunner.gnm1.ann1.A288I1 Arachis hypogaea HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 59.3
CANSAT54G2720 Cannabis sativa HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 60.5
CDE04G2273 Ceratophyllum demersum HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 64.2
Ca_01448_v3 Cicer arietinum L. HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 58.0
Psat2g091240 Pisum sativum HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 58.0
Solyc11g072610.3 Solanum lycopersicum HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 61.7
Sopen11g030260 Solanum pennellii HOM05D007288 ORTHO05D009200 7.5e-21 103.6 81 61.7
arahy.Tifrunner.gnm1.ann1.93BU3Z Arachis hypogaea HOM05D007288 ORTHO05D009200 1.3e-20 102.8 81 58.0
AUR62025046 Chenopodium quinoa HOM05D007288 ORTHO05D009200 1.3e-20 102.8 81 60.5
TPR.G11620 Trifolium pratense HOM05D007288 ORTHO05D009200 1.3e-20 102.8 81 58.0
Cc01_g11850 Coffea canephora HOM05D007288 ORTHO05D009200 1.7e-20 102.4 80 62.5
Cfa011389 Carpinus fangiana HOM05D007288 ORTHO05D009200 2.9e-20 101.7 81 60.5
Gohir.D07G098000 Gossypium hirsutum HOM05D007288 ORTHO05D009200 2.9e-20 101.7 81 63.0
Gorai.001G105400 Gossypium raimondii HOM05D007288 ORTHO05D009200 2.9e-20 101.7 81 63.0
Sed0021724 Sechium edule HOM05D007288 ORTHO05D009200 2.9e-20 101.7 81 64.2
ClCG02G020790 Citrullus lanatus HOM05D007288 ORTHO05D009200 8.3e-20 100.1 81 63.0
vmacro14486 Vaccinium macrocarpon HOM05D007288 ORTHO05D009200 8.3e-20 100.1 81 59.3
CiPaw.13G104600 Carya illinoinensis HOM05D007288 ORTHO05D009200 1.4e-19 99.4 81 59.3
Hma1.2p1_0861F.1_g229670 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 1.9e-19 99.0 81 59.3
Hma1.2p1_0861F.1_g229675 Hydrangea macrophylla HOM05D007288 ORTHO05D009200 1.9e-19 99.0 81 59.3
Lalb_Chr14g0374871 Lupinus albus HOM05D007288 ORTHO05D009200 1.9e-19 99.0 81 56.8
TWI75G0177 Tripterygium wilfordii HOM05D007288 ORTHO05D009200 1.9e-19 99.0 81 59.3
CsaV3_6G021820 Cucumis sativus L. HOM05D007288 ORTHO05D009200 2.4e-19 98.6 81 61.7
Hund08177 Selenicereus undatus HOM05D007288 ORTHO05D009200 2.4e-19 98.6 81 59.3
COL.COLO4_18386 Corchorus olitorius HOM05D007288 ORTHO05D009200 3.2e-19 98.2 81 60.5
MELO3C025727.2 Cucumis melo HOM05D007288 ORTHO05D009200 3.2e-19 98.2 81 61.7
Lsat_1_v5_gn_5_164600 Lactuca sativa HOM05D007288 ORTHO05D009200 3.2e-19 98.2 81 63.0
Oeu058505.2 Olea europaea HOM05D007288 ORTHO05D009200 3.2e-19 98.2 81 61.7
Atru.chr3.3740 Acer truncatum HOM05D007288 ORTHO05D009200 4.1e-19 97.8 81 59.3
BolC4t27295H Brassica oleracea HOM05D007288 ORTHO05D009200 5.4e-19 97.4 81 55.6
Ciclev10028721m.g Citrus clementina HOM05D007288 ORTHO05D009200 5.4e-19 97.4 81 56.8
DCAR_005289 Daucus carota HOM05D007288 ORTHO05D009200 5.4e-19 97.4 81 59.3
ECA248G2408 Erigeron canadensis HOM05D007288 ORTHO05D009200 7.1e-19 97.1 81 59.3
BcaB06g28228 Brassica carinata HOM05D007288 ORTHO05D009200 9.2e-19 96.7 81 55.6
BcaC02g08159 Brassica carinata HOM05D007288 ORTHO05D009200 9.2e-19 96.7 81 55.6
A04p21650 Brassica napus HOM05D007288 ORTHO05D009200 9.2e-19 96.7 81 55.6
C04p57770 Brassica napus HOM05D007288 ORTHO05D009200 9.2e-19 96.7 81 55.6
CSS0002437 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 9.2e-19 96.7 81 58.0
Sc21g0000170 Simmondsia chinensis HOM05D007288 ORTHO05D009200 1.2e-18 96.3 81 59.3
Manes.04G027100 Manihot esculenta HOM05D007288 ORTHO05D009200 1.6e-18 95.9 81 56.8
unitig_61.g26166 Utricularia gibba HOM05D007288 ORTHO05D009200 2.1e-18 95.5 81 58.0
AT2G28560 Arabidopsis thaliana HOM05D007288 ORTHO05D009200 2.7e-18 95.1 81 53.1
GSVIVG01025099001 Vitis vinifera HOM05D007288 ORTHO05D009200 3.5e-18 94.7 81 58.0
Thhalv10017710m.g Eutrema salsugineum HOM05D007288 ORTHO05D009200 4.6e-18 94.4 81 51.9
BraA04t17729Z Brassica rapa HOM05D007288 ORTHO05D009200 6.0e-18 94.0 81 55.6
Sp4g11390 Schrenkiella parvula HOM05D007288 ORTHO05D009200 2.3e-17 92.0 81 51.9
THA.LOC104800033 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 2.3e-17 92.0 81 53.1
THA.LOC104815758 Tarenaya hassleriana HOM05D007288 ORTHO05D009200 2.3e-17 92.0 81 53.1
AagrBONN_evm.TU.Sc2ySwM_368.1709 Anthoceros agrestis HOM05D007288 ORTHO05D009200 3.0e-17 91.7 81 55.6
SGA_v2.0_scaffold146G36239 Striga asiatica HOM05D007288 ORTHO05D009200 3.0e-17 91.7 85 57.6
Carub.0004s0953 Capsella rubella HOM05D007288 ORTHO05D009200 5.1e-17 90.9 81 50.6
CARHR121570 Cardamine hirsuta HOM05D007288 ORTHO05D009200 8.6e-17 90.1 81 50.6
Eucgr.B02451 Eucalyptus grandis HOM05D007288 ORTHO05D009200 8.6e-17 90.1 81 55.6
Thecc.09G336000 Theobroma cacao HOM05D007288 ORTHO05D009200 1.9e-16 89.0 81 59.3
HanXRQChr15g0493521 Helianthus annuus HOM05D007288 ORTHO05D009200 7.3e-16 87.0 81 54.3
Pp3c25_15290 Physcomitrium patens HOM05D007288 ORTHO05D009200 1.2e-15 86.3 81 49.4
HPP92_001033 Vanilla planifolia HOM05D007288 ORTHO05D009200 1.6e-15 85.9 79 53.2
Mapoly0007s0061 Marchantia polymorpha HOM05D007288 ORTHO05D009200 2.1e-15 85.5 81 49.4
Zm00001eb355220 Zea mays HOM05D007288 ORTHO05D009200 8.9e-14 80.1 80 50.0
CBR_g23396 Chara braunii HOM05D007288 ORTHO05D009200 5.8e-13 77.4 83 45.8
Os05g0121700 Oryza sativa ssp. japonica HOM05D007288 ORTHO05D009200 9.9e-13 76.6 81 49.4
Peaxi162Scf00616g00015 Petunia axillaris HOM05D007288 ORTHO05D009200 1.7e-12 75.9 69 56.5
PGR102G2823 Punica granatum HOM05D007288 ORTHO05D009200 2.9e-12 75.1 52 65.4
CSS0029402 Camellia sinensis var. sinensis HOM05D007288 ORTHO05D009200 6.4e-12 73.9 69 53.6
Nn2g10628 Nelumbo nucifera HOM05D007288 ORTHO05D009200 2.4e-11 72.0 52 63.5
Prupe.6G090900 Prunus persica HOM05D007288 ORTHO05D009200 5.4e-11 70.9 49 63.3
Cpa.g.sc139.41 Carica papaya HOM05D007288 ORTHO05D009200 1.6e-10 69.3 52 59.6
Gohir.A07G093400 Gossypium hirsutum HOM05D007288 ORTHO05D009200 2.1e-10 68.9 49 63.3
Oeu047705.1 Olea europaea HOM05D007288 ORTHO05D009200 2.1e-10 68.9 50 66.0
Ah.01g002370 Amaranthus hybridus HOM05D007288 ORTHO05D009200 2.7e-10 68.6 52 59.6
ECA248G3450 Erigeron canadensis HOM05D000009 ORTHO05D000008 3.9e-09 64.7 40 72.5
Dinv32816 Davidia involucrata HOM05D007288 ORTHO05D009200 1.1e-08 63.2 52 57.7
MCO10G289 Micromonas commoda HOM05D007288 ORTHO05D009200 1.4e-06 56.2 103 34.0
PRCOL_00002179 Prasinoderma coloniale HOM05D007288 ORTHO05D009200 6.9e-06 53.9 90 42.2


User provided reference genes

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