Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 0.0e+00 1483.4 822 100.0
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 2.1e-22 112.1 258 31.0
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 8.7e-21 106.7 216 33.3
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 4.3e-20 104.4 233 33.5
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 4.3e-20 104.4 217 35.0
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 7.4e-20 103.6 217 33.2
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 2.4e-18 98.6 229 31.0
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 1.2e-17 96.3 288 31.9
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 1.2e-17 96.3 229 30.6
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 2.6e-17 95.1 216 31.9
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 4.5e-17 94.4 202 30.7
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 5.8e-17 94.0 199 32.7
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 7.6e-17 93.6 264 28.8
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 1.0e-16 93.2 198 30.8
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 1.3e-16 92.8 211 30.3
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 2.2e-16 92.0 201 32.3
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 2.9e-16 91.7 215 31.2
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 3.8e-16 91.3 202 31.7
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 6.5e-16 90.5 197 31.5
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 1.4e-15 89.4 274 29.6
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 2.5e-15 88.6 217 29.5
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 3.2e-15 88.2 215 27.9
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 5.5e-15 87.4 256 27.7
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 5.5e-15 87.4 180 31.1
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 5.5e-15 87.4 198 31.8
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 7.1e-15 87.0 223 31.8
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 9.3e-15 86.7 305 26.6
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.6e-14 85.9 209 31.6
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 2.1e-14 85.5 198 32.3
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 2.1e-14 85.5 198 30.8
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 3.5e-14 84.7 132 38.6
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 3.5e-14 84.7 252 28.6
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 7.9e-14 83.6 203 30.0
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 7.9e-14 83.6 235 29.4
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 7.9e-14 83.6 197 30.5
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 7.9e-14 83.6 199 31.2
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 7.9e-14 83.6 133 36.1
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 1.0e-13 83.2 198 30.3
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.0e-13 83.2 210 26.2
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 1.0e-13 83.2 194 32.0
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 1.3e-13 82.8 198 28.8
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 1.8e-13 82.4 198 29.3
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.8e-13 82.4 209 28.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 3.0e-13 81.6 243 26.7
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 5.1e-13 80.9 131 37.4
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 6.7e-13 80.5 197 30.5
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 8.7e-13 80.1 199 30.2
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 1.1e-12 79.7 292 27.7
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 1.5e-12 79.3 198 27.8
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 1.5e-12 79.3 256 29.7
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 2.5e-12 78.6 130 36.9
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 3.3e-12 78.2 198 30.3
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.3e-12 77.8 224 29.0
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 5.7e-12 77.4 198 28.3
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.4e-12 77.0 287 28.2
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 7.4e-12 77.0 210 27.6
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 9.7e-12 76.6 201 30.3
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 9.7e-12 76.6 121 36.4
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 9.7e-12 76.6 287 27.5
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 1.3e-11 76.3 256 28.9
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 1.3e-11 76.3 165 30.3
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 1.6e-11 75.9 198 29.3
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.6e-11 75.9 200 31.5
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 2.2e-11 75.5 210 27.1
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 2.2e-11 75.5 208 24.5
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 2.2e-11 75.5 196 26.5
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.8e-11 75.1 198 30.3
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 3.7e-11 74.7 218 27.5
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 3.7e-11 74.7 197 32.0
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 4.8e-11 74.3 210 25.2
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 4.8e-11 74.3 132 36.4
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 4.8e-11 74.3 270 27.0
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 6.3e-11 73.9 126 35.7
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.1e-10 73.2 209 28.7
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 1.1e-10 73.2 219 26.5
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.4e-10 72.8 265 26.4
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.8e-10 72.4 289 27.3
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.1e-10 71.6 210 24.8
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.1e-10 71.6 216 30.1
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 4.1e-10 71.2 269 25.7
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 4.1e-10 71.2 227 26.4
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 5.3e-10 70.9 167 35.9
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.2e-09 69.7 219 26.9
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 1.5e-09 69.3 296 26.0
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 1.5e-09 69.3 93 33.3
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 1.5e-09 69.3 98 36.7
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 1.5e-09 69.3 130 34.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.0e-09 68.9 217 27.2
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 2.6e-09 68.6 204 28.9
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 1.3e-08 66.2 199 26.6
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 1.7e-08 65.9 130 30.8
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 6.5e-08 63.9 98 29.6
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 8.5e-08 63.5 196 28.1
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.1e-07 63.2 48 60.4
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 1.4e-07 62.8 56 51.8
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 7.2e-07 60.5 127 29.9
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 2.7e-06 58.5 180 26.1
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 4.6e-06 57.8 69 37.7
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 6.1e-06 57.4 149 29.5


User provided reference genes

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