Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12883 Sequoiadendron giganteum HOM05D047292 ORTHO05D000002 1.1e-44 183.0 91 100.0
SEGI_31842 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 2.2e-18 95.5 53 86.8
SEGI_09978 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.6e-16 89.4 53 83.0
SEGI_33183 Sequoiadendron giganteum HOM05D047292 ORTHO05D384702 1.3e-13 79.7 43 90.7
SEGI_22280 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.1e-12 74.7 78 52.6
SEGI_33642 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 4.2e-09 64.7 52 57.7
SHI52134 Sapria himalayana HOM05D000004 ORTHO05D000002 7.2e-09 63.9 55 52.7
SEGI_03418 Sequoiadendron giganteum HOM05D000010 ORTHO05D000151 7.2e-09 63.9 38 84.2
SEGI_22201 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 7.2e-09 63.9 52 55.8
SHI36384 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI37684 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI38968 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI47393 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI47577 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI47584 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI50214 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI53379 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI53605 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI53900 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI54999 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI55114 Sapria himalayana HOM05D000004 ORTHO05D000002 1.2e-08 63.2 55 54.5
SHI46232 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-08 62.8 55 54.5
SHI48165 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-08 62.8 55 54.5
SHI49998 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-08 62.8 55 54.5
SHI55249 Sapria himalayana HOM05D000004 ORTHO05D000002 1.6e-08 62.8 55 54.5
SHI45890 Sapria himalayana HOM05D000004 ORTHO05D000002 2.7e-08 62.0 55 52.7
SHI42747 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-08 61.2 55 54.5
SHI42770 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-08 61.2 55 52.7
SHI42953 Sapria himalayana HOM05D000004 ORTHO05D000002 4.7e-08 61.2 55 52.7
SHI40336 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-08 60.8 55 52.7
SHI46510 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-08 60.8 53 54.7
SHI50774 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-08 60.8 55 54.5
SHI51461 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-08 60.8 55 54.5
SHI54189 Sapria himalayana HOM05D000004 ORTHO05D000002 6.1e-08 60.8 55 52.7
SEGI_39024 Sequoiadendron giganteum HOM05D003441 ORTHO05D004516 6.1e-08 60.8 35 80.0
SHI34686 Sapria himalayana HOM05D000004 ORTHO05D000002 1.0e-07 60.1 54 51.9
SEGI_19822 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.0e-07 60.1 53 52.8
SHI54030 Sapria himalayana HOM05D000004 ORTHO05D000002 1.4e-07 59.7 55 52.7
SHI43800 Sapria himalayana HOM05D000004 ORTHO05D000002 1.8e-07 59.3 55 50.9
Ah.08g220540 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.0e-07 58.5 51 52.9
Ah.08g220550 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.0e-07 58.5 51 52.9
SEGI_05198 Sequoiadendron giganteum HOM05D008993 ORTHO05D010920 3.9e-07 58.2 67 40.3
SEGI_09231 Sequoiadendron giganteum HOM05D001874 ORTHO05D002166 5.1e-07 57.8 52 51.9
SEGI_30017 Sequoiadendron giganteum HOM05D002752 ORTHO05D014263 5.1e-07 57.8 67 41.8
SHI44389 Sapria himalayana HOM05D000004 ORTHO05D000002 6.7e-07 57.4 60 48.3
SEGI_39031 Sequoiadendron giganteum HOM05D000004 ORTHO05D016146 6.7e-07 57.4 52 51.9
SEGI_24361 Sequoiadendron giganteum HOM05D000004 ORTHO05D000002 1.1e-06 56.6 64 43.8
Gohir.A11G189066 Gossypium hirsutum HOM05D000004 ORTHO05D000002 1.5e-06 56.2 55 52.7
CSS0018828 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-06 55.8 51 54.9
CSS0031388 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.0e-06 55.8 55 49.1
SEGI_41613 Sequoiadendron giganteum HOM05D000210 ORTHO05D000247 2.0e-06 55.8 38 76.3
HanXRQChr01g0012431 Helianthus annuus HOM05D000004 ORTHO05D000002 3.3e-06 55.1 51 51.0
CSS0042036 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.7e-06 54.3 67 41.8
FvH4_4g10361 Fragaria vesca HOM05D000004 ORTHO05D000002 7.4e-06 53.9 51 49.0
HanXRQChr01g0021621 Helianthus annuus HOM05D000004 ORTHO05D000002 7.4e-06 53.9 50 52.0
SHI37742 Sapria himalayana HOM05D000004 ORTHO05D000002 7.4e-06 53.9 55 47.3
CSS0004331 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 51 52.9
CSS0013843 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 55 47.3
CSS0025343 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 51 52.9
CSS0026028 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 51 52.9
CSS0026362 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-06 53.5 51 52.9
Ca_23982_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 9.7e-06 53.5 51 47.1
Ca_28054_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 9.7e-06 53.5 51 47.1


User provided reference genes

Program Settings