Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12851 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 3.0e-88 328.6 172 100.0
SEGI_15047 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 3.9e-32 142.1 226 44.7
SEGI_09724 Sequoiadendron giganteum HOM05D003200 ORTHO05D003574 1.1e-18 97.4 133 50.4
ATR0807G127 Amborella trichopoda HOM05D003200 ORTHO05D003574 1.2e-09 67.4 114 38.6
Rhsim13G0227400 Rhododendron simsii HOM05D003200 ORTHO05D003574 1.6e-09 67.0 109 36.7
Hund21653 Selenicereus undatus HOM05D003200 ORTHO05D003574 3.6e-09 65.9 115 34.8
Ah.06g193140 Amaranthus hybridus HOM05D003200 ORTHO05D003574 4.7e-09 65.5 115 35.7
TAR623G0555 Trochodendron aralioides HOM05D003200 ORTHO05D003574 4.7e-09 65.5 105 36.2
Lj5g0003842 Lotus japonicus HOM05D003200 ORTHO05D003574 6.1e-09 65.1 114 36.8
MBI06_g07796_MAGBIO Magnolia biondii HOM05D003200 ORTHO05D003574 2.3e-08 63.2 120 35.8
QL01p009941 Quercus lobata HOM05D003200 ORTHO05D003574 2.3e-08 63.2 113 35.4
TAR369G0274 Trochodendron aralioides HOM05D003200 ORTHO05D003574 2.3e-08 63.2 110 35.5
Glyma.10G294900 Glycine max HOM05D003200 ORTHO05D003574 3.0e-08 62.8 115 35.7
Glyma.20G244700 Glycine max HOM05D003200 ORTHO05D003574 3.0e-08 62.8 115 35.7
unitig_60.g25721 Utricularia gibba HOM05D003200 ORTHO05D003574 3.0e-08 62.8 112 36.6
CSS0033476 Camellia sinensis var. sinensis HOM05D003200 ORTHO05D003574 5.2e-08 62.0 115 35.7
Duzib170G0875 Durio zibethinus HOM05D003200 ORTHO05D003574 5.2e-08 62.0 113 37.2
Phvul.007G005200 Phaseolus vulgaris HOM05D003200 ORTHO05D003574 5.2e-08 62.0 115 34.8
VMungo0720G1305 Vigna mungo HOM05D003200 ORTHO05D003574 6.7e-08 61.6 115 35.7
EL10Ac4g10333 Beta vulgaris HOM05D003200 ORTHO05D003574 8.8e-08 61.2 115 33.9
BcaB01g04823 Brassica carinata HOM05D003200 ORTHO05D003574 8.8e-08 61.2 113 37.2
BolC3t13598H Brassica oleracea HOM05D003200 ORTHO05D003574 8.8e-08 61.2 112 36.6
Lsat_1_v5_gn_1_68481 Lactuca sativa HOM05D003200 ORTHO05D003574 8.8e-08 61.2 112 35.7
Lsat_1_v5_gn_6_49141 Lactuca sativa HOM05D003200 ORTHO05D003574 8.8e-08 61.2 108 36.1
Sed0009987 Sechium edule HOM05D003200 ORTHO05D003574 8.8e-08 61.2 107 38.3
TWI34G0579 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 8.8e-08 61.2 110 35.5
Ciclev10015088m.g Citrus clementina HOM05D003200 ORTHO05D003574 1.5e-07 60.5 116 36.2
Lalb_Chr06g0164391 Lupinus albus HOM05D003200 ORTHO05D003574 1.5e-07 60.5 113 37.2
Sc16g0011990 Simmondsia chinensis HOM05D003200 ORTHO05D003574 1.5e-07 60.5 115 33.9
ATR0564G514 Amborella trichopoda HOM05D003200 ORTHO05D003574 2.0e-07 60.1 127 37.8
PSO339G4963 Papaver somniferum HOM05D003200 ORTHO05D003574 2.0e-07 60.1 117 36.8
Psat6g241840 Pisum sativum HOM05D003200 ORTHO05D003574 2.0e-07 60.1 108 38.9
unitig_0.g182 Utricularia gibba HOM05D003200 ORTHO05D003574 2.0e-07 60.1 112 36.6
A02p05900 Brassica napus HOM05D003200 ORTHO05D003574 2.6e-07 59.7 106 38.7
BraA02t05542Z Brassica rapa HOM05D003200 ORTHO05D003574 2.6e-07 59.7 106 38.7
Dinv36326 Davidia involucrata HOM05D003200 ORTHO05D003574 2.6e-07 59.7 115 33.9
HanXRQChr11g0345461 Helianthus annuus HOM05D003200 ORTHO05D003574 2.6e-07 59.7 114 35.1
Potri.001G011800 Populus trichocarpa HOM05D003200 ORTHO05D003574 2.6e-07 59.7 114 33.3
Actinidia06303 Actinidia chinensis HOM05D003200 ORTHO05D003574 3.3e-07 59.3 115 33.9
A03p09700 Brassica napus HOM05D003200 ORTHO05D003574 3.3e-07 59.3 112 36.6
C03p11280 Brassica napus HOM05D003200 ORTHO05D003574 3.3e-07 59.3 113 36.3
BraA03t10286Z Brassica rapa HOM05D003200 ORTHO05D003574 3.3e-07 59.3 112 36.6
AUR62000043 Chenopodium quinoa HOM05D003200 ORTHO05D003574 3.3e-07 59.3 85 38.8
Dinv43936 Davidia involucrata HOM05D003200 ORTHO05D003574 3.3e-07 59.3 111 37.8
Hma1.2p1_0505F.1_g168170 Hydrangea macrophylla HOM05D003200 ORTHO05D003574 3.3e-07 59.3 113 37.2
Sc09g0000340 Simmondsia chinensis HOM05D003200 ORTHO05D003574 3.3e-07 59.3 112 33.0
TAR633G1334 Trochodendron aralioides HOM05D003200 ORTHO05D003574 3.3e-07 59.3 110 36.4
A10p19820 Brassica napus HOM05D003200 ORTHO05D003574 4.4e-07 58.9 117 34.2
BraA10t44058Z Brassica rapa HOM05D003200 ORTHO05D003574 4.4e-07 58.9 117 34.2
Cfa009640 Carpinus fangiana HOM05D003200 ORTHO05D003574 4.4e-07 58.9 110 36.4
Lj9P622T4 Lonicera japonica HOM05D003200 ORTHO05D003574 4.4e-07 58.9 109 35.8
THA.LOC104811052 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 4.4e-07 58.9 116 34.5
FvH4_3g44330 Fragaria vesca HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
FAN11G2071 Fragaria x ananassa HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
FAN16G1057 Fragaria x ananassa HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
FAN21G1034 Fragaria x ananassa HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
FAN25G2592 Fragaria x ananassa HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
Prupe.6G014100 Prunus persica HOM05D003200 ORTHO05D003574 5.7e-07 58.5 109 34.9
RcHm_v2.0_Chr5g0080701 Rosa chinensis HOM05D003200 ORTHO05D003574 5.7e-07 58.5 108 37.0
Thecc.09G216900 Theobroma cacao HOM05D003200 ORTHO05D003574 5.7e-07 58.5 113 35.4
BcaB08g36558 Brassica carinata HOM05D003200 ORTHO05D003574 7.4e-07 58.2 117 34.2
C09p56140 Brassica napus HOM05D003200 ORTHO05D003574 7.4e-07 58.2 117 34.2
BolC9t58481H Brassica oleracea HOM05D003200 ORTHO05D003574 7.4e-07 58.2 117 34.2
AUR62019213 Chenopodium quinoa HOM05D003200 ORTHO05D003574 7.4e-07 58.2 82 39.0
Medtr1g116330 Medicago truncatula HOM05D003200 ORTHO05D003574 7.4e-07 58.2 112 38.4
Actinidia06863 Actinidia chinensis HOM05D003200 ORTHO05D003574 9.7e-07 57.8 117 35.0
Potri.003G214300 Populus trichocarpa HOM05D003200 ORTHO05D003574 9.7e-07 57.8 114 34.2
SGA_v2.0_scaffold1G00760 Striga asiatica HOM05D003200 ORTHO05D003574 9.7e-07 57.8 118 34.7
BolC2t06994H Brassica oleracea HOM05D003200 ORTHO05D003574 1.3e-06 57.4 107 35.5
Sabra01G0008800 Salix brachista HOM05D003200 ORTHO05D003574 1.3e-06 57.4 118 33.1
Sed0003084 Sechium edule HOM05D003200 ORTHO05D003574 1.3e-06 57.4 118 32.2
TPR.G10419 Trifolium pratense HOM05D003200 ORTHO05D003574 1.3e-06 57.4 112 38.4
BcaC04g19396 Brassica carinata HOM05D003200 ORTHO05D003574 1.7e-06 57.0 117 33.3
Ca_02880_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 1.7e-06 57.0 110 34.5
COL.COLO4_10428 Corchorus olitorius HOM05D003200 ORTHO05D003574 1.7e-06 57.0 75 41.3
Migut.D00540 Erythranthe guttata HOM05D003200 ORTHO05D003574 1.7e-06 57.0 117 35.9
Thhalv10013350m.g Eutrema salsugineum HOM05D003200 ORTHO05D003574 1.7e-06 57.0 116 33.6
Medtr2g061360 Medicago truncatula HOM05D003200 ORTHO05D003574 1.7e-06 57.0 102 38.2
THA.LOC104799746 Tarenaya hassleriana HOM05D003200 ORTHO05D003574 1.7e-06 57.0 117 33.3
AL6G31430 Arabidopsis lyrata HOM05D003200 ORTHO05D003574 2.2e-06 56.6 113 32.7
AT5G19900 Arabidopsis thaliana HOM05D003200 ORTHO05D003574 2.2e-06 56.6 113 32.7
MSTRG.17558 Avicennia marina HOM05D003200 ORTHO05D003574 2.2e-06 56.6 115 33.9
MSTRG.18395 Avicennia marina HOM05D003200 ORTHO05D003574 2.2e-06 56.6 115 35.7
BNapus_Darmor_BZH_scaffold_38p01970 Brassica napus HOM05D003200 ORTHO05D003574 2.2e-06 56.6 109 34.9
Carub.0006s1827 Capsella rubella HOM05D003200 ORTHO05D003574 2.2e-06 56.6 113 32.7
CARHR192960 Cardamine hirsuta HOM05D003200 ORTHO05D003574 2.2e-06 56.6 113 33.6
ECA233G5951 Erigeron canadensis HOM05D003200 ORTHO05D003574 2.2e-06 56.6 105 36.2
Nitab4.5_0005041g0060 Nicotiana tabacum HOM05D003200 ORTHO05D003574 2.2e-06 56.6 114 33.3
Sp6g24480 Schrenkiella parvula HOM05D003200 ORTHO05D003574 2.2e-06 56.6 116 33.6
Atru.chr3.2140 Acer truncatum HOM05D003200 ORTHO05D003574 2.8e-06 56.2 128 32.8
CiPaw.14G129600 Carya illinoinensis HOM05D003200 ORTHO05D003574 2.8e-06 56.2 115 33.0
Gohir.A05G066600 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.8e-06 56.2 113 32.7
Gohir.D05G069100 Gossypium hirsutum HOM05D003200 ORTHO05D003574 2.8e-06 56.2 113 32.7
Gorai.009G070100 Gossypium raimondii HOM05D003200 ORTHO05D003574 2.8e-06 56.2 113 32.7
Lj1P478T20 Lonicera japonica HOM05D003200 ORTHO05D003574 2.8e-06 56.2 112 33.0
Lj2P674T26 Lonicera japonica HOM05D003200 ORTHO05D003574 2.8e-06 56.2 112 33.9
MD03G1014800 Malus domestica HOM05D003200 ORTHO05D003574 2.8e-06 56.2 107 34.6
MD11G1016000 Malus domestica HOM05D003200 ORTHO05D003574 2.8e-06 56.2 107 34.6
SalBow2G1492 Salvia bowleyana HOM05D003200 ORTHO05D003574 2.8e-06 56.2 112 35.7
SalBow2G2949 Salvia bowleyana HOM05D003200 ORTHO05D003574 2.8e-06 56.2 112 35.7
TWI60G0814 Tripterygium wilfordii HOM05D003200 ORTHO05D003574 2.8e-06 56.2 110 33.6
TAR636G3550 Trochodendron aralioides HOM05D003200 ORTHO05D003574 2.8e-06 56.2 112 32.1
Aqoxy1G00122 Aquilegia oxysepala HOM05D003200 ORTHO05D003574 3.7e-06 55.8 113 33.6
Dinv43495 Davidia involucrata HOM05D003200 ORTHO05D003574 3.7e-06 55.8 108 32.4
Nitab4.5_0003436g0110 Nicotiana tabacum HOM05D003200 ORTHO05D003574 3.7e-06 55.8 114 36.0
SalBow2G0964 Salvia bowleyana HOM05D003200 ORTHO05D003574 3.7e-06 55.8 110 36.4
Atru.chr3.2127 Acer truncatum HOM05D003200 ORTHO05D003574 4.8e-06 55.5 118 34.7
Ca_11388_v3 Cicer arietinum L. HOM05D003200 ORTHO05D003574 6.3e-06 55.1 112 37.5
Duzib150G1584 Durio zibethinus HOM05D003200 ORTHO05D003574 6.3e-06 55.1 113 32.7
Lalb_Chr21g0307561 Lupinus albus HOM05D003200 ORTHO05D003574 6.3e-06 55.1 102 37.3
Eucgr.B03639 Eucalyptus grandis HOM05D003200 ORTHO05D003574 8.2e-06 54.7 78 38.5


User provided reference genes

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