Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12849 Sequoiadendron giganteum HOM05D003461 ORTHO05D004386 2.8e-131 471.9 227 100.0
ATR0037G074 Amborella trichopoda HOM05D003461 ORTHO05D004386 8.8e-32 141.4 114 71.1
Lj7C712G4 Lonicera japonica HOM05D003461 ORTHO05D004386 8.8e-32 141.4 96 75.0
RcHm_v2.0_Chr6g0312731 Rosa chinensis HOM05D003461 ORTHO05D004386 2.6e-31 139.8 96 75.0
Prupe.1G466400 Prunus persica HOM05D003461 ORTHO05D004386 3.4e-31 139.4 96 75.0
TAR383G0906 Trochodendron aralioides HOM05D003461 ORTHO05D004386 3.4e-31 139.4 96 75.0
FAN24G1347 Fragaria x ananassa HOM05D003461 ORTHO05D004386 4.4e-31 139.0 97 74.2
CAN.G21.14 Capsicum annuum HOM05D003461 ORTHO05D004386 5.7e-31 138.7 96 75.0
arahy.Tifrunner.gnm1.ann1.4R6GA4 Arachis hypogaea HOM05D003461 ORTHO05D004386 7.5e-31 138.3 99 71.7
Nn2g11834 Nelumbo nucifera HOM05D003461 ORTHO05D004386 7.5e-31 138.3 96 75.0
Peaxi162Scf00105g01316 Petunia axillaris HOM05D003461 ORTHO05D004386 7.5e-31 138.3 96 75.0
MD08G1135800 Malus domestica HOM05D003461 ORTHO05D004386 9.8e-31 137.9 96 74.0
Solyc08g067860.2 Solanum lycopersicum HOM05D003461 ORTHO05D004386 9.8e-31 137.9 96 75.0
Sopen08g021790 Solanum pennellii HOM05D003461 ORTHO05D004386 9.8e-31 137.9 96 75.0
Dinv30215 Davidia involucrata HOM05D003461 ORTHO05D004386 1.3e-30 137.5 96 72.9
FvH4_2g30180 Fragaria vesca HOM05D003461 ORTHO05D004386 1.3e-30 137.5 96 74.0
FAN15G0070 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.3e-30 137.5 96 74.0
FAN20G1067 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.3e-30 137.5 96 74.0
FAN27G2808 Fragaria x ananassa HOM05D003461 ORTHO05D004386 1.3e-30 137.5 96 74.0
Nitab4.5_0009600g0030 Nicotiana tabacum HOM05D003461 ORTHO05D004386 1.7e-30 137.1 96 74.0
HPP92_015152 Vanilla planifolia HOM05D003461 ORTHO05D004386 1.7e-30 137.1 96 74.0
arahy.Tifrunner.gnm1.ann1.3VS957 Arachis hypogaea HOM05D003461 ORTHO05D004386 2.2e-30 136.7 96 72.9
Manes.13G069700 Manihot esculenta HOM05D003461 ORTHO05D004386 2.8e-30 136.3 96 74.0
DCAR_006261 Daucus carota HOM05D003461 ORTHO05D004386 3.7e-30 136.0 96 72.9
BcaC02g08333 Brassica carinata HOM05D003461 ORTHO05D004386 6.3e-30 135.2 96 74.0
A04p19870 Brassica napus HOM05D003461 ORTHO05D004386 6.3e-30 135.2 96 74.0
C04p55600 Brassica napus HOM05D003461 ORTHO05D004386 6.3e-30 135.2 96 74.0
Glyma.04G072400 Glycine max HOM05D003461 ORTHO05D004386 8.3e-30 134.8 96 72.9
BraA04t17575Z Brassica rapa HOM05D003461 ORTHO05D004386 1.1e-29 134.4 104 70.2
SalBow4G0560 Salvia bowleyana HOM05D003461 ORTHO05D004386 1.1e-29 134.4 97 70.1
AT2G25660 Arabidopsis thaliana HOM05D003461 ORTHO05D004386 1.4e-29 134.0 96 74.0
BolC4t27084H Brassica oleracea HOM05D003461 ORTHO05D004386 1.4e-29 134.0 93 75.3
Carub.0004s0545 Capsella rubella HOM05D003461 ORTHO05D004386 1.4e-29 134.0 96 74.0
Sp4g05280 Schrenkiella parvula HOM05D003461 ORTHO05D004386 1.4e-29 134.0 96 74.0
Thecc.09G143900 Theobroma cacao HOM05D003461 ORTHO05D004386 1.4e-29 134.0 96 72.9
Aqoxy7G01835 Aquilegia oxysepala HOM05D003461 ORTHO05D004386 1.8e-29 133.7 105 68.6
AL4G17260 Arabidopsis lyrata HOM05D003461 ORTHO05D004386 1.8e-29 133.7 96 74.0
Lalb_Chr11g0063991 Lupinus albus HOM05D003461 ORTHO05D004386 1.8e-29 133.7 96 72.9
Sc09g0008870 Simmondsia chinensis HOM05D003461 ORTHO05D004386 1.8e-29 133.7 96 71.9
GSVIVG01035727001 Vitis vinifera HOM05D003461 ORTHO05D004386 1.8e-29 133.7 96 72.9
Atru.chr7.2323 Acer truncatum HOM05D003461 ORTHO05D004386 2.4e-29 133.3 96 72.9
Phvul.001G055800 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 2.4e-29 133.3 96 71.9
Aa31sc76G80 Aethionema arabicum HOM05D003461 ORTHO05D004386 4.1e-29 132.5 96 72.9
BcaB06g28084 Brassica carinata HOM05D003461 ORTHO05D004386 4.1e-29 132.5 96 72.9
Ciclev10007226m.g Citrus clementina HOM05D003461 ORTHO05D004386 4.1e-29 132.5 96 72.9
Dinv35880 Davidia involucrata HOM05D003461 ORTHO05D004386 4.1e-29 132.5 96 70.8
VMungo0647G2469 Vigna mungo HOM05D003461 ORTHO05D004386 4.1e-29 132.5 96 70.8
COL.COLO4_24068 Corchorus olitorius HOM05D003461 ORTHO05D004386 5.4e-29 132.1 96 71.9
Ah.12g063310 Amaranthus hybridus HOM05D003461 ORTHO05D004386 7.0e-29 131.7 96 69.8
TWI34G1710 Tripterygium wilfordii HOM05D003461 ORTHO05D004386 7.0e-29 131.7 96 70.8
Cc08_g08280 Coffea canephora HOM05D003461 ORTHO05D004386 9.1e-29 131.3 96 68.8
MD15G1115200 Malus domestica HOM05D003461 ORTHO05D004386 9.1e-29 131.3 96 70.8
THA.LOC104819890 Tarenaya hassleriana HOM05D003461 ORTHO05D004386 9.1e-29 131.3 96 70.8
Oeu019417.3 Olea europaea HOM05D003461 ORTHO05D004386 1.2e-28 131.0 96 67.7
Os01g0179400 Oryza sativa ssp. japonica HOM05D003461 ORTHO05D004386 1.6e-28 130.6 96 67.7
PSO063G5065 Papaver somniferum HOM05D003461 ORTHO05D004386 1.6e-28 130.6 112 66.1
PSO782G2185 Papaver somniferum HOM05D003461 ORTHO05D004386 1.6e-28 130.6 112 66.1
EL10Ac2g02534 Beta vulgaris HOM05D003461 ORTHO05D004386 2.0e-28 130.2 96 68.8
Glyma.06G073700 Glycine max HOM05D003461 ORTHO05D004386 2.0e-28 130.2 96 68.8
Pp3c4_150 Physcomitrium patens HOM05D003461 ORTHO05D004386 2.7e-28 129.8 97 70.1
CANSAT01G0438 Cannabis sativa HOM05D003461 ORTHO05D004386 3.5e-28 129.4 96 68.8
Haze_21625 Corylus avellana HOM05D003461 ORTHO05D004386 3.5e-28 129.4 96 69.8
Migut.A00272 Erythranthe guttata HOM05D003461 ORTHO05D004386 4.5e-28 129.0 96 68.8
Thhalv10000008m.g Eutrema salsugineum HOM05D003461 ORTHO05D004386 4.5e-28 129.0 96 71.9
Gohir.A06G048100 Gossypium hirsutum HOM05D003461 ORTHO05D004386 5.9e-28 128.6 97 72.2
Gohir.D06G048050 Gossypium hirsutum HOM05D003461 ORTHO05D004386 5.9e-28 128.6 97 72.2
Gohir.D06G048151 Gossypium hirsutum HOM05D003461 ORTHO05D004386 5.9e-28 128.6 97 72.2
Gorai.010G053900 Gossypium raimondii HOM05D003461 ORTHO05D004386 5.9e-28 128.6 97 72.2
Hund28667 Selenicereus undatus HOM05D003461 ORTHO05D004386 5.9e-28 128.6 96 70.8
Hund28681 Selenicereus undatus HOM05D003461 ORTHO05D004386 5.9e-28 128.6 96 70.8
Cpa.g.sc91.7 Carica papaya HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 70.8
AUR62024833 Chenopodium quinoa HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 68.8
AUR62032384 Chenopodium quinoa HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 68.8
Gorai.009G011800 Gossypium raimondii HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 69.8
Rhsim07G0154200 Rhododendron simsii HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 68.8
Zm00001eb122270 Zea mays HOM05D003461 ORTHO05D004386 7.7e-28 128.3 96 66.7
CARHR115590 Cardamine hirsuta HOM05D003461 ORTHO05D004386 1.0e-27 127.9 96 69.8
Gohir.A05G010700 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.0e-27 127.9 96 69.8
Mapoly0004s0170 Marchantia polymorpha HOM05D003461 ORTHO05D004386 1.0e-27 127.9 117 58.1
PGR044G2079 Punica granatum HOM05D003461 ORTHO05D004386 1.0e-27 127.9 96 69.8
SGA_v2.0_scaffold27G11498 Striga asiatica HOM05D003461 ORTHO05D004386 1.0e-27 127.9 96 66.7
vmacro05447 Vaccinium macrocarpon HOM05D003461 ORTHO05D004386 1.0e-27 127.9 96 68.8
Gohir.D05G011400 Gossypium hirsutum HOM05D003461 ORTHO05D004386 1.3e-27 127.5 96 69.8
Lj5g0000879 Lotus japonicus HOM05D003461 ORTHO05D004386 1.3e-27 127.5 96 67.7
Sabra18G0035400 Salix brachista HOM05D003461 ORTHO05D004386 1.3e-27 127.5 97 70.1
Actinidia14640 Actinidia chinensis HOM05D003461 ORTHO05D004386 1.7e-27 127.1 96 68.8
CsaV3_3G046700 Cucumis sativus L. HOM05D003461 ORTHO05D004386 1.7e-27 127.1 96 70.8
Potri.018G034700 Populus trichocarpa HOM05D003461 ORTHO05D004386 1.7e-27 127.1 96 70.8
CSS0003133 Camellia sinensis var. sinensis HOM05D003461 ORTHO05D004386 2.2e-27 126.7 96 69.8
MELO3C003666.2 Cucumis melo HOM05D003461 ORTHO05D004386 2.2e-27 126.7 96 70.8
Glyma.17G204000 Glycine max HOM05D003461 ORTHO05D004386 2.9e-27 126.3 96 68.8
ClCG05G017220 Citrullus lanatus HOM05D003461 ORTHO05D004386 3.8e-27 125.9 97 70.1
unitig_747.g21880 Utricularia gibba HOM05D003461 ORTHO05D004386 3.8e-27 125.9 96 66.7
ECA240G1832 Erigeron canadensis HOM05D003461 ORTHO05D004386 5.0e-27 125.6 96 67.7
Duzib150G1527 Durio zibethinus HOM05D003461 ORTHO05D004386 8.5e-27 124.8 96 68.8
Psat6g031040 Pisum sativum HOM05D003461 ORTHO05D004386 1.1e-26 124.4 97 70.1
Phvul.009G098100 Phaseolus vulgaris HOM05D003461 ORTHO05D004386 2.5e-26 123.2 96 65.6
Sed0017351 Sechium edule HOM05D003461 ORTHO05D004386 2.5e-26 123.2 96 68.8
Medtr1g010300 Medicago truncatula HOM05D003461 ORTHO05D004386 4.2e-26 122.5 97 68.0
AagrBONN_evm.TU.Sc2ySwM_228.5632 Anthoceros agrestis HOM05D003461 ORTHO05D004386 1.2e-25 120.9 96 66.7
VMungo1309G1485 Vigna mungo HOM05D003461 ORTHO05D004386 1.6e-25 120.6 96 65.6
TPR.G20094 Trifolium pratense HOM05D003461 ORTHO05D004386 3.6e-25 119.4 97 68.0
Lj1g0021913 Lotus japonicus HOM05D003461 ORTHO05D004386 4.7e-25 119.0 96 63.5
Actinidia15711 Actinidia chinensis HOM05D003461 ORTHO05D004386 6.1e-25 118.6 96 64.6
Medtr3g108080 Medicago truncatula HOM05D003461 ORTHO05D004386 6.1e-25 118.6 96 66.7
Lsat_1_v5_gn_5_45581 Lactuca sativa HOM05D003461 ORTHO05D004386 1.0e-24 117.9 95 64.2
Ca_15696_v3 Cicer arietinum L. HOM05D003461 ORTHO05D004386 3.0e-24 116.3 97 66.0
Psat5g027760 Pisum sativum HOM05D003461 ORTHO05D004386 3.0e-24 116.3 96 64.6
SMO347G0057 Selaginella moellendorffii HOM05D003461 ORTHO05D004386 3.4e-23 112.8 109 56.0
Lsat_1_v5_gn_9_53460 Lactuca sativa HOM05D003461 ORTHO05D004386 1.3e-22 110.9 96 62.5
TPR.G34693 Trifolium pratense HOM05D003461 ORTHO05D004386 6.3e-22 108.6 96 62.5
HanXRQChr08g0221141 Helianthus annuus HOM05D003461 ORTHO05D004386 1.6e-20 104.0 96 57.3
CBR_g20101 Chara braunii HOM05D003461 ORTHO05D004386 3.5e-20 102.8 97 59.8
Eucgr.C02859 Eucalyptus grandis HOM05D003461 ORTHO05D004386 3.3e-18 96.3 72 68.1
Lsat_1_v5_gn_9_70541 Lactuca sativa HOM05D003461 ORTHO05D004386 1.7e-14 84.0 74 58.1
CiPaw.07G217600 Carya illinoinensis HOM05D003461 ORTHO05D004386 2.7e-12 76.6 49 77.6
Lsat_1_v5_gn_9_113480 Lactuca sativa HOM05D003461 ORTHO05D004386 3.5e-12 76.3 63 61.9
Glyma.14G129400 Glycine max HOM05D003461 ORTHO05D004386 2.3e-11 73.6 49 73.5
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.3e-11 73.6 54 63.0
SEGI_00417 Sequoiadendron giganteum HOM05D002775 ORTHO05D006750 3.9e-11 72.8 40 80.0
SEGI_40801 Sequoiadendron giganteum HOM05D003314 ORTHO05D000285 8.6e-11 71.6 98 42.9
SEGI_41300 Sequoiadendron giganteum HOM05D003314 ORTHO05D015881 8.6e-11 71.6 98 42.9
Lsat_1_v5_gn_3_38460 Lactuca sativa HOM05D003461 ORTHO05D014082 3.3e-10 69.7 49 69.4
SEGI_16346 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 5.6e-10 68.9 39 76.9
SEGI_11681 Sequoiadendron giganteum HOM05D002474 ORTHO05D007142 8.0e-09 65.1 40 72.5
Lsat_1_v5_gn_4_41661 Lactuca sativa HOM05D003461 ORTHO05D004386 1.8e-08 63.9 59 61.0
SEGI_13735 Sequoiadendron giganteum HOM05D004690 ORTHO05D005527 1.5e-07 60.8 74 45.9
SEGI_03367 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 2.6e-07 60.1 102 37.3
SEGI_12999 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 2.6e-07 60.1 135 31.9
SEGI_19377 Sequoiadendron giganteum HOM05D013703 ORTHO05D000002 4.9e-06 55.8 81 39.5


User provided reference genes

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