Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 3.8e-75 284.6 135 100.0
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.4e-61 239.6 135 80.7
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 2.0e-60 235.7 135 78.5
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 2.0e-60 235.7 135 80.0
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 4.6e-60 234.6 135 79.3
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 4.6e-60 234.6 135 79.3
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 4.6e-60 234.6 135 80.0
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 5.9e-60 234.2 135 79.3
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 5.9e-60 234.2 136 78.7
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 7.8e-60 233.8 135 80.7
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 7.8e-60 233.8 135 77.8
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 7.8e-60 233.8 136 80.1
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 7.8e-60 233.8 135 78.5
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 1.0e-59 233.4 135 79.3
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 2.3e-59 232.3 135 77.8
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 3.0e-59 231.9 135 79.3
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 3.0e-59 231.9 135 80.0
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 5.0e-59 231.1 136 77.2
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 6.6e-59 230.7 135 79.3
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 6.6e-59 230.7 135 77.0
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 8.6e-59 230.3 135 80.0
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 8.6e-59 230.3 136 77.2
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 8.6e-59 230.3 135 77.8
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 1.1e-58 229.9 135 77.0
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 1.1e-58 229.9 135 77.8
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 1.5e-58 229.6 135 77.0
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 1.5e-58 229.6 135 77.0
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 1.5e-58 229.6 134 77.6
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 1.9e-58 229.2 135 79.3
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 1.9e-58 229.2 136 77.9
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 2.5e-58 228.8 135 77.8
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 3.3e-58 228.4 135 76.3
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 4.3e-58 228.0 135 77.0
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 5.6e-58 227.6 135 74.8
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 5.6e-58 227.6 135 76.3
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 7.3e-58 227.3 136 77.9
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 7.3e-58 227.3 135 77.0
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 9.5e-58 226.9 135 77.0
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 9.5e-58 226.9 135 77.0
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 1.2e-57 226.5 135 77.0
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 1.2e-57 226.5 133 78.9
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 1.2e-57 226.5 135 78.5
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 1.2e-57 226.5 135 76.3
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 1.6e-57 226.1 135 77.8
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 2.1e-57 225.7 136 76.5
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 2.1e-57 225.7 136 74.3
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 2.8e-57 225.3 135 75.6
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 3.6e-57 224.9 135 77.0
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 3.6e-57 224.9 135 77.8
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 3.6e-57 224.9 135 77.8
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 4.7e-57 224.6 136 76.5
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 4.7e-57 224.6 136 75.7
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 6.2e-57 224.2 135 76.3
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 6.2e-57 224.2 135 74.8
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 6.2e-57 224.2 135 74.8
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 8.0e-57 223.8 135 74.1
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 8.0e-57 223.8 135 75.6
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 1.0e-56 223.4 135 76.3
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 1.8e-56 222.6 135 74.8
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.8e-56 222.6 135 74.1
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 2.3e-56 222.2 133 75.9
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 2.3e-56 222.2 134 78.4
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 3.1e-56 221.9 134 73.1
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 3.1e-56 221.9 133 77.4
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 5.2e-56 221.1 135 73.3
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 5.2e-56 221.1 135 74.8
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 6.8e-56 220.7 135 75.6
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 6.8e-56 220.7 133 72.9
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 8.9e-56 220.3 135 76.3
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 1.2e-55 219.9 134 76.1
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 1.5e-55 219.5 138 73.9
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 1.5e-55 219.5 135 74.8
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 1.5e-55 219.5 147 69.4
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 5.8e-55 217.6 145 69.7
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 2.2e-54 215.7 135 71.1
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 4.9e-54 214.5 123 80.5
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 4.1e-53 211.5 144 69.4
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 2.7e-52 208.8 125 75.2
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 6.2e-49 197.6 109 81.7
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 1.1e-48 196.8 136 66.2
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 3.1e-48 195.3 134 65.7
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 2.0e-47 192.6 132 63.6
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 1.9e-45 186.0 107 77.6
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 3.1e-40 168.7 107 71.0
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 4.0e-40 168.3 122 63.9
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 4.0e-40 168.3 112 71.4
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 9.9e-39 163.7 214 44.4
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 1.9e-37 159.5 95 77.9
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 4.1e-37 158.3 103 71.8
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 1.1e-34 150.2 135 58.5
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 1.1e-32 143.7 98 65.3
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 7.6e-31 137.5 125 52.0
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 1.9e-29 132.9 79 72.2
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 3.5e-28 128.6 133 48.1
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 4.9e-22 108.2 130 41.5
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 2.1e-20 102.8 127 41.7
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 5.1e-19 98.2 55 81.8
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 5.1e-19 98.2 55 81.8
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 6.7e-19 97.8 56 80.4
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 8.1e-17 90.9 122 36.9
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 2.9e-14 82.4 55 67.3
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 4.8e-09 65.1 39 74.4


User provided reference genes

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