Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12719 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 1.9e-27 125.2 67 100.0
Lj4C710T4 Lonicera japonica HOM05D003420 ORTHO05D003970 4.0e-17 90.9 53 86.8
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 5.3e-17 90.5 53 86.8
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 5.3e-17 90.5 55 81.8
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 6.9e-17 90.1 53 88.7
Cpa.g.sc88.64 Carica papaya HOM05D003420 ORTHO05D003970 6.9e-17 90.1 55 81.8
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 6.9e-17 90.1 53 86.8
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 6.9e-17 90.1 53 86.8
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 6.9e-17 90.1 53 86.8
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 6.9e-17 90.1 53 86.8
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 84.9
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 84.9
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 86.8
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 84.9
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 84.9
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 84.9
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 9.0e-17 89.7 53 86.8
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 1.2e-16 89.4 53 84.9
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 1.2e-16 89.4 53 84.9
vmacro11080 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 1.2e-16 89.4 53 84.9
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 1.2e-16 89.4 53 84.9
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 1.5e-16 89.0 53 84.9
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 1.5e-16 89.0 53 84.9
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 2.0e-16 88.6 53 83.0
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 2.0e-16 88.6 53 83.0
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 84.9
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 84.9
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 83.0
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 83.0
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 83.0
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 83.0
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 2.6e-16 88.2 53 83.0
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 3.4e-16 87.8 53 83.0
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 3.4e-16 87.8 53 83.0
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 3.4e-16 87.8 53 84.9
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 3.4e-16 87.8 53 84.9
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 3.4e-16 87.8 52 84.6
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 81.1
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 84.9
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 4.5e-16 87.4 53 83.0
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 5.8e-16 87.0 53 83.0
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 5.8e-16 87.0 53 83.0
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 5.8e-16 87.0 53 83.0
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 5.8e-16 87.0 52 82.7
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 5.8e-16 87.0 53 83.0
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 5.8e-16 87.0 53 83.0
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 7.6e-16 86.7 53 83.0
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 7.6e-16 86.7 53 81.1
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 7.6e-16 86.7 53 83.0
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 7.6e-16 86.7 53 81.1
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 7.6e-16 86.7 53 81.1
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 83.0
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 83.0
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 83.0
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 9.9e-16 86.3 53 81.1
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 79.2
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 81.1
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 83.0
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 83.0
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 81.1
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 83.0
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 83.0
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 1.3e-15 85.9 53 83.0
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.7e-15 85.5 53 81.1
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.7e-15 85.5 53 81.1
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 1.7e-15 85.5 53 83.0
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 1.7e-15 85.5 52 80.8
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 1.7e-15 85.5 52 80.8
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 2.2e-15 85.1 52 82.7
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 2.2e-15 85.1 52 82.7
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 2.2e-15 85.1 52 82.7
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 2.2e-15 85.1 53 81.1
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 2.2e-15 85.1 53 81.1
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 2.2e-15 85.1 53 81.1
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 2.2e-15 85.1 53 81.1
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 2.9e-15 84.7 53 81.1
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 3.8e-15 84.3 53 81.1
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 4.9e-15 84.0 53 79.2
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 6.4e-15 83.6 53 81.1
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 6.4e-15 83.6 53 81.1
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 6.4e-15 83.6 53 79.2
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 6.4e-15 83.6 53 77.4
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 8.4e-15 83.2 53 79.2
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 1.9e-14 82.0 53 79.2
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 1.9e-14 82.0 53 77.4
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.9e-14 82.0 53 77.4
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 4.2e-14 80.9 53 75.5
ClCG08G008060 Citrullus lanatus HOM05D003420 ORTHO05D003970 5.5e-14 80.5 53 77.4
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 5.5e-14 80.5 53 75.5
SHI09125 Sapria himalayana HOM05D003420 ORTHO05D003970 5.5e-14 80.5 54 75.9
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 7.1e-14 80.1 54 79.6
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 7.1e-14 80.1 53 75.5
Haze_13388 Corylus avellana HOM05D011287 ORTHO05D013061 9.3e-14 79.7 51 78.4
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.2e-13 79.3 52 76.9
AagrBONN_evm.TU.Sc2ySwM_117.1499 Anthoceros agrestis HOM05D003420 ORTHO05D003970 4.6e-13 77.4 52 80.8
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 1.8e-12 75.5 52 76.9
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 2.3e-12 75.1 53 77.4
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 2.3e-12 75.1 52 76.9
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
CARHR290960 Cardamine hirsuta HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 6.7e-12 73.6 53 75.5
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 8.7e-12 73.2 52 76.9
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 1.5e-11 72.4 65 60.0
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 1.5e-11 72.4 56 73.2
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 4.3e-11 70.9 52 73.1
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 2.0e-08 62.0 53 69.8


User provided reference genes

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