Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12600 Sequoiadendron giganteum HOM05D007053 ORTHO05D008922 8.0e-91 337.0 165 100.0
Actinidia33234 Actinidia chinensis HOM05D007053 ORTHO05D008922 1.5e-44 183.3 119 67.2
Cfa008919 Carpinus fangiana HOM05D007053 ORTHO05D008922 2.5e-44 182.6 123 65.9
TAR629G2828 Trochodendron aralioides HOM05D007053 ORTHO05D008922 4.3e-44 181.8 119 68.1
Haze_11947 Corylus avellana HOM05D007053 ORTHO05D008922 5.6e-44 181.4 123 65.9
ATR0730G101 Amborella trichopoda HOM05D007053 ORTHO05D008922 1.2e-43 180.3 119 68.1
GSVIVG01001339001 Vitis vinifera HOM05D007053 ORTHO05D008922 1.2e-43 180.3 119 68.9
Nn4g23303 Nelumbo nucifera HOM05D007053 ORTHO05D008922 1.6e-43 179.9 119 68.1
Atru.chr11.1705 Acer truncatum HOM05D007053 ORTHO05D008922 2.1e-43 179.5 119 67.2
CSS0030124 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 2.1e-43 179.5 119 65.5
CiPaw.06G089300 Carya illinoinensis HOM05D007053 ORTHO05D008922 2.1e-43 179.5 123 64.2
Aqoxy3G03518 Aquilegia oxysepala HOM05D007053 ORTHO05D008922 2.8e-43 179.1 119 65.5
MSTRG.7772 Avicennia marina HOM05D007053 ORTHO05D008922 4.7e-43 178.3 119 66.4
Eucgr.B03188 Eucalyptus grandis HOM05D007053 ORTHO05D008922 4.7e-43 178.3 115 68.7
CSS0045311 Camellia sinensis var. sinensis HOM05D007053 ORTHO05D008922 1.1e-42 177.2 119 64.7
Dinv16695 Davidia involucrata HOM05D007053 ORTHO05D008922 1.4e-42 176.8 119 67.2
AL1G39090 Arabidopsis lyrata HOM05D007053 ORTHO05D008922 1.8e-42 176.4 119 66.4
Sabra10G0123900 Salix brachista HOM05D007053 ORTHO05D008922 1.8e-42 176.4 119 66.4
Migut.L01233 Erythranthe guttata HOM05D007053 ORTHO05D008922 2.3e-42 176.0 119 66.4
Lj3A1033T59 Lonicera japonica HOM05D007053 ORTHO05D008922 2.3e-42 176.0 119 66.4
Manes.01G031400 Manihot esculenta HOM05D007053 ORTHO05D008922 4.0e-42 175.3 119 66.4
Thecc.02G338500 Theobroma cacao HOM05D007053 ORTHO05D008922 5.2e-42 174.9 119 67.2
Solyc04g005520.3 Solanum lycopersicum HOM05D007053 ORTHO05D008922 6.8e-42 174.5 115 67.8
Thhalv10008165m.g Eutrema salsugineum HOM05D007053 ORTHO05D008922 8.9e-42 174.1 119 65.5
Rhsim12G0133300 Rhododendron simsii HOM05D007053 ORTHO05D008922 8.9e-42 174.1 119 63.9
Sp1g22160 Schrenkiella parvula HOM05D007053 ORTHO05D008922 8.9e-42 174.1 119 65.5
Sopen04g001540 Solanum pennellii HOM05D007053 ORTHO05D008922 8.9e-42 174.1 115 68.7
Carub.0001s2439 Capsella rubella HOM05D007053 ORTHO05D008922 1.2e-41 173.7 117 66.7
Duzib248G0053 Durio zibethinus HOM05D007053 ORTHO05D008922 1.5e-41 173.3 119 65.5
Gohir.A13G079000 Gossypium hirsutum HOM05D007053 ORTHO05D008922 1.5e-41 173.3 119 65.5
Potri.010G162900 Populus trichocarpa HOM05D007053 ORTHO05D008922 1.5e-41 173.3 118 66.1
ClCG09G022040 Citrullus lanatus HOM05D007053 ORTHO05D008922 2.0e-41 172.9 127 61.4
QL03p069977 Quercus lobata HOM05D007053 ORTHO05D008922 2.0e-41 172.9 122 62.3
CAN.G765.42 Capsicum annuum HOM05D007053 ORTHO05D008922 2.6e-41 172.6 115 67.8
Peaxi162Scf00187g00127 Petunia axillaris HOM05D007053 ORTHO05D008922 2.6e-41 172.6 115 67.0
Hund06137 Selenicereus undatus HOM05D007053 ORTHO05D008922 5.8e-41 171.4 113 68.1
THA.LOC104808621 Tarenaya hassleriana HOM05D007053 ORTHO05D008922 5.8e-41 171.4 117 65.0
Oeu021091.2 Olea europaea HOM05D007053 ORTHO05D008922 7.6e-41 171.0 119 65.5
PSO063G7037 Papaver somniferum HOM05D007053 ORTHO05D008922 7.6e-41 171.0 111 66.7
Sed0004632 Sechium edule HOM05D007053 ORTHO05D008922 7.6e-41 171.0 120 62.5
C05p24370 Brassica napus HOM05D007053 ORTHO05D008922 9.9e-41 170.6 119 64.7
BolC5t31171H Brassica oleracea HOM05D007053 ORTHO05D008922 9.9e-41 170.6 119 64.7
MBI19_g40191_MAGBIO Magnolia biondii HOM05D007053 ORTHO05D008922 9.9e-41 170.6 125 64.8
PSO063G1507 Papaver somniferum HOM05D007053 ORTHO05D008922 9.9e-41 170.6 111 67.6
Aa31LG7G8460 Aethionema arabicum HOM05D007053 ORTHO05D008922 1.3e-40 170.2 115 67.0
Lsat_1_v5_gn_8_46861 Lactuca sativa HOM05D007053 ORTHO05D008922 1.3e-40 170.2 113 66.4
ECA233G1809 Erigeron canadensis HOM05D007053 ORTHO05D008922 1.7e-40 169.9 113 65.5
Gorai.013G090300 Gossypium raimondii HOM05D007053 ORTHO05D008922 1.7e-40 169.9 119 64.7
AT1G26640 Arabidopsis thaliana HOM05D007053 ORTHO05D008922 2.2e-40 169.5 119 65.5
Psat2g127520 Pisum sativum HOM05D007053 ORTHO05D008922 2.2e-40 169.5 117 65.8
PGR102G0611 Punica granatum HOM05D007053 ORTHO05D008922 2.2e-40 169.5 115 66.1
Cc11_g12440 Coffea canephora HOM05D007053 ORTHO05D008922 2.9e-40 169.1 113 66.4
MELO3C002980.2 Cucumis melo HOM05D007053 ORTHO05D008922 2.9e-40 169.1 125 61.6
CsaV3_5G025100 Cucumis sativus L. HOM05D007053 ORTHO05D008922 2.9e-40 169.1 125 61.6
CARHR025330 Cardamine hirsuta HOM05D007053 ORTHO05D008922 3.8e-40 168.7 117 64.1
FAN12G2464 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.8e-40 168.7 120 62.5
Lalb_Chr10g0098501 Lupinus albus HOM05D007053 ORTHO05D008922 3.8e-40 168.7 117 66.7
RcHm_v2.0_Chr4g0439031 Rosa chinensis HOM05D007053 ORTHO05D008922 3.8e-40 168.7 119 63.9
SMO116G0352 Selaginella moellendorffii HOM05D007053 ORTHO05D008922 4.9e-40 168.3 115 67.8
BcaC05g26403 Brassica carinata HOM05D007053 ORTHO05D008922 6.4e-40 167.9 115 66.1
FAN22G2353 Fragaria x ananassa HOM05D007053 ORTHO05D008922 6.4e-40 167.9 120 62.5
Lj2g0014226 Lotus japonicus HOM05D007053 ORTHO05D008922 6.4e-40 167.9 117 65.8
Pp3c3_35320 Physcomitrium patens HOM05D007053 ORTHO05D008922 6.4e-40 167.9 119 62.2
A09p40050 Brassica napus HOM05D007053 ORTHO05D008922 8.4e-40 167.5 119 63.9
BraA09t39501Z Brassica rapa HOM05D007053 ORTHO05D008922 8.4e-40 167.5 119 63.9
Glyma.02G112200 Glycine max HOM05D007053 ORTHO05D008922 8.4e-40 167.5 117 65.0
HanXRQChr08g0211061 Helianthus annuus HOM05D007053 ORTHO05D008922 8.4e-40 167.5 113 66.4
CANSAT64G1913 Cannabis sativa HOM05D007053 ORTHO05D008922 1.9e-39 166.4 123 58.5
Medtr5g042980 Medicago truncatula HOM05D007053 ORTHO05D008922 2.4e-39 166.0 117 64.1
FAN17G2706 Fragaria x ananassa HOM05D007053 ORTHO05D008922 4.1e-39 165.2 120 61.7
Phvul.002G091000 Phaseolus vulgaris HOM05D007053 ORTHO05D008922 4.1e-39 165.2 117 63.2
Ca_04893_v3 Cicer arietinum L. HOM05D007053 ORTHO05D008922 5.4e-39 164.9 117 63.2
TPR.G19934 Trifolium pratense HOM05D007053 ORTHO05D008922 5.4e-39 164.9 117 63.2
Nitab4.5_0011225g0030 Nicotiana tabacum HOM05D007053 ORTHO05D008922 7.1e-39 164.5 123 61.8
FAN07G1757 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.2e-39 164.1 120 60.8
FAN22G1358 Fragaria x ananassa HOM05D007053 ORTHO05D008922 9.2e-39 164.1 120 60.8
PGSC0003DMG400002850 Solanum tuberosum HOM05D007053 ORTHO05D008922 9.2e-39 164.1 120 64.2
MD13G1067400 Malus domestica HOM05D007053 ORTHO05D008922 1.2e-38 163.7 119 60.5
EL10Ac6g13278 Beta vulgaris HOM05D007053 ORTHO05D008922 2.1e-38 162.9 119 63.9
VMungo1215G2121 Vigna mungo HOM05D007053 ORTHO05D008922 2.1e-38 162.9 117 62.4
Ciclev10031995m.g Citrus clementina HOM05D007053 ORTHO05D008922 3.5e-38 162.2 128 60.2
Nitab4.5_0000014g0210 Nicotiana tabacum HOM05D007053 ORTHO05D008922 3.5e-38 162.2 115 65.2
Prupe.1G280800 Prunus persica HOM05D007053 ORTHO05D008922 7.8e-38 161.0 119 58.8
Zm00001eb370300 Zea mays HOM05D007053 ORTHO05D008922 7.8e-38 161.0 118 61.9
AUR62005859 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.9e-37 158.7 133 57.1
Sc04g0007810 Simmondsia chinensis HOM05D007053 ORTHO05D008922 6.6e-37 157.9 114 61.4
FvH4_4g30620 Fragaria vesca HOM05D007053 ORTHO05D008922 1.9e-36 156.4 120 59.2
vmacro16354 Vaccinium macrocarpon HOM05D007053 ORTHO05D008922 1.6e-35 153.3 158 47.5
Mapoly0180s0007 Marchantia polymorpha HOM05D007053 ORTHO05D008922 1.5e-33 146.7 113 57.5
AagrBONN_evm.TU.Sc2ySwM_228.2378 Anthoceros agrestis HOM05D007053 ORTHO05D008922 2.9e-32 142.5 140 52.9
CBR_g29893 Chara braunii HOM05D007053 ORTHO05D008922 8.7e-29 131.0 128 50.0
unitig_699.g19912 Utricularia gibba HOM05D007053 ORTHO05D008922 1.1e-28 130.6 95 64.2
arahy.Tifrunner.gnm1.ann1.8N8AS7 Arachis hypogaea HOM05D007053 ORTHO05D008922 1.5e-28 130.2 117 50.4
TWI79G1311 Tripterygium wilfordii HOM05D007053 ORTHO05D008922 3.3e-28 129.0 81 74.1
Ah.02g129320 Amaranthus hybridus HOM05D007053 ORTHO05D008922 4.3e-28 128.6 113 57.5
AUR62032851 Chenopodium quinoa HOM05D007053 ORTHO05D008922 3.6e-27 125.6 119 53.8
Cre13.g579800 Chlamydomonas reinhardtii HOM05D007053 ORTHO05D008922 5.3e-26 121.7 111 50.5
COL.COLO4_27954 Corchorus olitorius HOM05D007053 ORTHO05D008922 3.4e-25 119.0 119 50.4
SGA_v2.0_scaffold16G07742 Striga asiatica HOM05D007053 ORTHO05D008922 4.2e-23 112.1 123 48.8
DCAR_030987 Daucus carota HOM05D007053 ORTHO05D008922 2.1e-22 109.8 93 50.5
QL03p070004 Quercus lobata HOM05D007053 ORTHO05D008922 1.7e-16 90.1 119 37.8
arahy.Tifrunner.gnm1.ann1.L47GGJ Arachis hypogaea HOM05D007053 ORTHO05D008922 2.7e-14 82.8 96 43.8
MCO04G110 Micromonas commoda HOM05D007053 ORTHO05D008922 9.6e-12 74.3 85 44.7
SEGI_36210 Sequoiadendron giganteum HOM05D002606 ORTHO05D003016 1.6e-11 73.6 38 94.7
Pp3c8_2060 Physcomitrium patens HOM05D007053 ORTHO05D008922 8.1e-11 71.2 51 56.9
SEGI_15111 Sequoiadendron giganteum HOM05D000924 ORTHO05D007614 1.4e-10 70.5 39 87.2
FAN17G3123 Fragaria x ananassa HOM05D007053 ORTHO05D008922 3.1e-10 69.3 57 49.1
Lsat_1_v5_gn_1_96520 Lactuca sativa HOM05D007053 ORTHO05D008922 7.6e-09 64.7 49 53.1
SEGI_22153 Sequoiadendron giganteum HOM05D064569 ORTHO05D007614 2.9e-08 62.8 38 78.9
SEGI_24789 Sequoiadendron giganteum HOM05D002312 ORTHO05D007981 2.1e-06 56.6 39 74.4
SEGI_30601 Sequoiadendron giganteum HOM05D004234 ORTHO05D004670 2.1e-06 56.6 56 57.1
SEGI_05591 Sequoiadendron giganteum HOM05D017313 ORTHO05D021251 2.7e-06 56.2 29 93.1
SEGI_23254 Sequoiadendron giganteum HOM05D000399 ORTHO05D000304 4.6e-06 55.5 32 84.4


User provided reference genes

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