Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12575 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 1.7e-84 315.8 150 100.0
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 1.5e-27 126.7 73 79.5
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 1.6e-26 123.2 73 78.1
CDE06G0853 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 2.8e-26 122.5 73 79.5
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 4.8e-26 121.7 73 75.3
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 8.2e-26 120.9 83 69.9
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 1.4e-25 120.2 78 73.1
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.4e-25 120.2 73 78.1
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 1.4e-25 120.2 73 74.0
vmacro11112 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 1.4e-25 120.2 73 75.3
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 1.8e-25 119.8 73 75.3
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 2.4e-25 119.4 76 72.4
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 2.0e-24 116.3 73 71.2
Ah.12g056180 Amaranthus hybridus HOM05D001579 ORTHO05D003470 2.6e-24 115.9 78 65.4
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 2.6e-24 115.9 73 72.6
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 2.6e-24 115.9 73 72.6
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 3.4e-24 115.5 73 71.2
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 3.4e-24 115.5 78 70.5
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 3.4e-24 115.5 78 70.5
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 5.8e-24 114.8 73 74.0
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 7.6e-24 114.4 73 71.2
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.0e-23 114.0 73 69.9
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 1.0e-23 114.0 73 71.2
Cc02_g25820 Coffea canephora HOM05D001579 ORTHO05D003470 1.3e-23 113.6 73 67.1
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 1.3e-23 113.6 76 68.4
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 1.3e-23 113.6 81 65.4
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 1.7e-23 113.2 81 65.4
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 2.2e-23 112.8 73 72.6
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 2.2e-23 112.8 73 67.1
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.9e-23 112.5 73 69.9
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.9e-23 112.5 72 73.6
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 2.9e-23 112.5 78 65.4
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.9e-23 112.5 73 68.5
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 3.8e-23 112.1 73 68.5
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 3.8e-23 112.1 76 65.8
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 3.8e-23 112.1 78 66.7
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 3.8e-23 112.1 73 68.5
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 4.9e-23 111.7 73 68.5
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 6.5e-23 111.3 78 61.5
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 6.5e-23 111.3 73 67.1
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 6.5e-23 111.3 73 69.9
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 8.4e-23 110.9 73 68.5
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 1.1e-22 110.5 73 71.2
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.1e-22 110.5 73 67.1
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 1.4e-22 110.2 73 67.1
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 1.4e-22 110.2 73 65.8
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 1.9e-22 109.8 73 65.8
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 1.9e-22 109.8 73 67.1
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 4.2e-22 108.6 93 57.0
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 4.2e-22 108.6 78 65.4
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 4.2e-22 108.6 73 64.4
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 5.5e-22 108.2 73 65.8
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 7.1e-22 107.8 78 65.4
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 9.3e-22 107.5 75 65.3
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 9.3e-22 107.5 73 65.8
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 1.2e-21 107.1 73 64.4
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 1.6e-21 106.7 73 64.4
arahy.Tifrunner.gnm1.ann1.IB6GCN Arachis hypogaea HOM05D001579 ORTHO05D003470 1.6e-21 106.7 73 64.4
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 1.6e-21 106.7 81 60.5
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 1.6e-21 106.7 73 64.4
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 2.7e-21 105.9 73 64.4
Lalb_Chr03g0025691 Lupinus albus HOM05D001579 ORTHO05D003470 4.6e-21 105.1 73 65.8
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 4.6e-21 105.1 74 70.3
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 6.0e-21 104.8 73 65.8
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 6.0e-21 104.8 81 59.3
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 7.9e-21 104.4 78 66.7
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 1.3e-20 103.6 76 63.2
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 1.3e-20 103.6 73 63.0
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.3e-20 102.8 73 63.0
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 2.3e-20 102.8 73 61.6
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 2.3e-20 102.8 73 61.6
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 3.0e-20 102.4 74 66.2
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 3.0e-20 102.4 73 61.6
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 3.0e-20 102.4 74 70.3
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 3.9e-20 102.1 74 68.9
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.9e-20 102.1 78 59.0
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 6.7e-20 101.3 74 67.6
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 8.7e-20 100.9 74 67.6
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.1e-19 100.5 72 61.1
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 1.5e-19 100.1 74 66.2
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 1.5e-19 100.1 74 66.2
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 1.9e-19 99.8 77 64.9
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 1.9e-19 99.8 74 67.6
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 1.9e-19 99.8 74 64.9
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 2.5e-19 99.4 73 60.3
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 2.5e-19 99.4 74 66.2
FAN20G1104 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.5e-19 99.4 78 59.0
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 2.5e-19 99.4 74 64.9
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 3.3e-19 99.0 82 59.8
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 3.3e-19 99.0 74 64.9
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 4.3e-19 98.6 77 64.9
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 4.3e-19 98.6 78 57.7
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 4.3e-19 98.6 78 57.7
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 5.7e-19 98.2 74 66.2
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 7.4e-19 97.8 74 63.5
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 9.7e-19 97.4 74 64.9
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 9.7e-19 97.4 73 58.9
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 9.7e-19 97.4 73 58.9
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 9.7e-19 97.4 73 58.9
HPP92_002580 Vanilla planifolia HOM05D001579 ORTHO05D003470 9.7e-19 97.4 78 53.8
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 1.3e-18 97.1 73 57.5
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.6e-18 96.7 73 58.9
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.2e-18 96.3 73 57.5
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 2.8e-18 95.9 73 58.9
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.7e-18 95.5 78 56.4
Aa31LG3G6010 Aethionema arabicum HOM05D001579 ORTHO05D003470 6.3e-18 94.7 73 65.8
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 8.2e-18 94.4 74 63.5
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 1.1e-17 94.0 74 63.5
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 1.1e-17 94.0 74 63.5
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 1.4e-17 93.6 81 54.3
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.4e-17 93.6 72 59.7
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 1.8e-17 93.2 78 55.1
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 3.1e-17 92.4 66 62.1
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 3.1e-17 92.4 74 63.5
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 4.1e-17 92.0 74 62.2
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 5.3e-17 91.7 78 57.7
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 1.2e-16 90.5 78 51.3
DCAR_006199 Daucus carota HOM05D001579 ORTHO05D003470 1.5e-16 90.1 73 54.8
RcHm_v2.0_Chr6g0259031 Rosa chinensis HOM05D001579 ORTHO05D003470 1.5e-16 90.1 78 52.6
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 7.6e-16 87.8 74 58.1
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 1.7e-15 86.7 66 65.2
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 5.0e-15 85.1 74 55.4
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 5.0e-15 85.1 74 55.4
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 6.5e-15 84.7 74 54.1
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 6.5e-15 84.7 74 59.5
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 8.5e-15 84.3 74 55.4
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 1.4e-14 83.6 74 54.1
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 1.4e-14 83.6 74 54.1
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 2.5e-14 82.8 78 46.2
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 3.2e-14 82.4 73 53.4
AL7G31990 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 1.2e-13 80.5 74 55.4
Lj7A253G28 Lonicera japonica HOM05D001579 ORTHO05D003470 1.2e-13 80.5 114 40.4
BcaC03g13561 Brassica carinata HOM05D001579 ORTHO05D017611 1.6e-13 80.1 76 52.6
C09p46380 Brassica napus HOM05D001579 ORTHO05D003470 1.6e-13 80.1 74 52.7
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.6e-13 80.1 78 48.7
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 2.7e-13 79.3 81 55.6
BcaB01g00883 Brassica carinata HOM05D001579 ORTHO05D003470 2.7e-13 79.3 74 51.4
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 1.4e-12 77.0 73 45.2
SHI02915 Sapria himalayana HOM05D001579 ORTHO05D003470 2.3e-12 76.3 54 64.8
BcaB03g15109 Brassica carinata HOM05D001579 ORTHO05D003470 6.7e-12 74.7 72 51.4
BcaC08g46255 Brassica carinata HOM05D001579 ORTHO05D003470 6.7e-12 74.7 72 51.4
Rhsim05G0074300 Rhododendron simsii HOM05D001579 ORTHO05D003470 2.5e-11 72.8 42 73.8
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 2.5e-11 72.8 90 43.3
CARHR112750 Cardamine hirsuta HOM05D001579 ORTHO05D003470 4.3e-11 72.0 96 43.8
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 4.3e-11 72.0 77 48.1
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 5.7e-11 71.6 65 50.8
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 9.7e-11 70.9 66 51.5
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 9.7e-11 70.9 66 51.5
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 9.7e-11 70.9 66 51.5
Lj7A248G13 Lonicera japonica HOM05D001579 ORTHO05D003470 9.7e-11 70.9 140 32.9
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 1.3e-10 70.5 66 51.5
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 1.7e-10 70.1 68 50.0
BcaC08g46253 Brassica carinata HOM05D001579 ORTHO05D003470 1.7e-10 70.1 72 51.4
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 1.7e-10 70.1 66 51.5
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 2.8e-10 69.3 74 50.0
Duzib248G0143 Durio zibethinus HOM05D001579 ORTHO05D003470 1.4e-09 67.0 64 62.5
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 1.8e-09 66.6 74 48.6
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 4.1e-09 65.5 73 43.8
C02p09550 Brassica napus HOM05D001579 ORTHO05D017611 9.1e-09 64.3 58 56.9
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 9.1e-09 64.3 68 48.5
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 9.1e-09 64.3 76 42.1
A10p12820 Brassica napus HOM05D001579 ORTHO05D003470 1.5e-08 63.5 74 45.9
BraA10t43375Z Brassica rapa HOM05D001579 ORTHO05D003470 1.5e-08 63.5 74 45.9
Hma1.2p1_0052F.1_g030760 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.5e-08 63.5 75 42.7
Hma1.2p1_0681F.1_g202440 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.5e-08 63.5 41 68.3
A09p15640 Brassica napus HOM05D001579 ORTHO05D017611 1.0e-07 60.8 55 54.5
BraA01t04658Z Brassica rapa HOM05D001579 ORTHO05D017611 1.0e-07 60.8 55 54.5
BraA09t37204Z Brassica rapa HOM05D001579 ORTHO05D003470 1.0e-07 60.8 55 54.5
A10p05500 Brassica napus HOM05D001579 ORTHO05D017611 5.0e-07 58.5 55 52.7
BraA10t42813Z Brassica rapa HOM05D001579 ORTHO05D017611 5.0e-07 58.5 55 52.7
ATR1101G051 Amborella trichopoda HOM05D001579 ORTHO05D003470 1.9e-06 56.6 33 69.7
A03p60490 Brassica napus HOM05D001579 ORTHO05D017611 4.2e-06 55.5 51 54.9


User provided reference genes

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