Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 6.7e-204 713.8 354 100.0
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 5.4e-44 182.6 340 40.3
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.7e-43 180.3 344 40.4
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 2.7e-43 180.3 349 39.8
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 6.0e-43 179.1 344 40.1
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 3.0e-42 176.8 344 40.7
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 6.6e-42 175.6 344 39.8
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 8.6e-42 175.3 345 40.3
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 1.1e-41 174.9 338 39.6
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 1.5e-41 174.5 357 38.4
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 5.6e-41 172.6 340 40.6
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 7.3e-41 172.2 343 37.9
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.6e-40 171.0 343 38.2
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 1.6e-40 171.0 340 39.1
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 3.6e-40 169.9 343 37.9
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 3.6e-40 169.9 337 40.4
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 1.1e-39 168.3 348 37.6
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 1.1e-39 168.3 339 37.5
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 3.1e-39 166.8 342 39.8
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 4.0e-39 166.4 356 38.2
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 1.5e-38 164.5 345 38.6
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 1.5e-38 164.5 342 38.6
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 2.0e-38 164.1 343 38.5
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 4.4e-38 162.9 347 37.8
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 5.8e-38 162.5 339 37.8
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 5.8e-38 162.5 335 38.8
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 7.5e-38 162.2 342 38.6
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 9.8e-38 161.8 349 38.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 2.2e-37 160.6 343 37.6
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 2.9e-37 160.2 340 37.6
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 4.9e-37 159.5 340 37.1
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 6.4e-37 159.1 343 37.6
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-36 158.3 264 44.7
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.1e-36 158.3 340 36.8
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 2.4e-36 157.1 342 40.4
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 2.4e-36 157.1 343 37.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 4.1e-36 156.4 343 36.4
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 9.2e-36 155.2 342 36.8
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 2.1e-35 154.1 345 37.4
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 3.5e-35 153.3 284 44.0
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 2.3e-34 150.6 208 48.6
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 6.6e-34 149.1 204 52.0
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.9e-33 147.5 338 36.4
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.9e-33 147.5 345 36.8
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 2.5e-33 147.1 270 42.2
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 4.3e-33 146.4 279 40.5
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 5.6e-33 146.0 207 49.8
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 1.6e-32 144.4 353 35.4
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 3.6e-32 143.3 339 35.4
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 4.7e-32 142.9 344 36.3
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 8.1e-32 142.1 342 39.2
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 1.1e-31 141.7 343 38.2
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 1.4e-31 141.4 341 38.1
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.8e-31 141.0 350 37.1
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 5.2e-31 139.4 348 35.6
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 6.8e-31 139.0 269 42.8
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 4.4e-30 136.3 364 36.5
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 9.9e-30 135.2 346 34.7
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 9.9e-30 135.2 341 34.3
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 1.7e-29 134.4 342 36.3
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 1.7e-29 134.4 340 35.6
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.9e-29 132.9 341 34.3
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.1e-28 131.7 341 34.3
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.1e-28 131.7 347 37.8
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 1.4e-28 131.3 289 39.1
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 1.4e-28 131.3 289 39.1
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 1.9e-28 131.0 342 34.2
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.9e-28 131.0 338 34.6
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 4.1e-28 129.8 341 34.3
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 1.6e-27 127.9 281 39.5
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.1e-27 127.5 341 34.9
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 6.0e-27 125.9 279 38.7
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 6.0e-27 125.9 337 33.8
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 1.0e-26 125.2 312 36.9
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 1.3e-26 124.8 351 37.0
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 1.3e-26 124.8 279 39.1
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 1.7e-26 124.4 275 37.8
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 3.9e-26 123.2 280 39.3
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 5.1e-26 122.9 161 53.4
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 8.6e-26 122.1 345 33.6
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 1.9e-25 120.9 340 34.1
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 1.9e-25 120.9 343 33.2
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 3.3e-25 120.2 344 33.1
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 4.3e-25 119.8 354 33.9
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 2.1e-24 117.5 281 37.7
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 2.1e-24 117.5 281 37.7
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 2.1e-24 117.5 281 37.7
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 2.1e-24 117.5 281 38.4
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 2.8e-24 117.1 281 38.4
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 8.1e-24 115.5 248 38.3
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 3.1e-23 113.6 310 34.2
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 8.9e-23 112.1 274 37.6
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 1.2e-22 111.7 295 35.3
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.5e-22 111.3 351 33.3
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 7.6e-22 109.0 281 35.2
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 1.3e-21 108.2 226 42.5
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 4.2e-20 103.2 217 40.1
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 1.2e-19 101.7 257 37.0
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 2.7e-19 100.5 204 41.7
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 3.5e-19 100.1 277 35.0
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 3.5e-19 100.1 211 40.8
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 4.6e-19 99.8 226 40.7
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 1.7e-18 97.8 282 34.8
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 5.1e-18 96.3 207 41.1
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 2.1e-16 90.9 260 34.6
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 8.1e-16 89.0 160 45.6
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 2.4e-15 87.4 96 54.2
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.2e-14 85.1 110 55.5
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 5.4e-12 76.3 88 50.0
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 7.1e-12 75.9 209 33.5
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.2e-11 75.1 221 33.9
Pp3c14_26450 Physcomitrium patens HOM05D047446 ORTHO05D048784 2.7e-11 73.9 156 37.8
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 4.6e-11 73.2 79 50.6
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 1.9e-09 67.8 167 37.7
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 4.3e-09 66.6 213 32.4
Mapoly0061s0114 Marchantia polymorpha HOM05D047446 ORTHO05D048784 9.6e-09 65.5 145 39.3
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 1.3e-08 65.1 84 51.2
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 3.1e-07 60.5 100 35.0
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 3.1e-07 60.5 73 45.2
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 3.1e-07 60.5 73 45.2
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 1.2e-06 58.5 103 35.0
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 7.6e-06 55.8 40 65.0
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 9.9e-06 55.5 40 65.0


User provided reference genes

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