Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_12563 Sequoiadendron giganteum HOM05D005607 ORTHO05D008142 1.1e-37 159.5 82 100.0
CSS0003695 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 9.0e-11 70.1 73 50.7
CSS0008326 Camellia sinensis var. sinensis HOM05D005607 ORTHO05D008142 9.0e-11 70.1 73 50.7
GSVIVG01014288001 Vitis vinifera HOM05D005607 ORTHO05D008142 3.4e-10 68.2 73 52.1
Dinv20204 Davidia involucrata HOM05D005607 ORTHO05D008142 4.5e-10 67.8 73 53.4
Ciclev10007885m.g Citrus clementina HOM05D005607 ORTHO05D008142 5.8e-10 67.4 73 52.1
Duzib213G0871 Durio zibethinus HOM05D005607 ORTHO05D008142 5.8e-10 67.4 56 57.1
MSTRG.12893 Avicennia marina HOM05D005607 ORTHO05D008142 1.7e-09 65.9 74 47.3
Thecc.07G096400 Theobroma cacao HOM05D005607 ORTHO05D008142 1.7e-09 65.9 60 53.3
Atru.chr2.2407 Acer truncatum HOM05D005607 ORTHO05D008142 2.2e-09 65.5 58 56.9
ATR0737G117 Amborella trichopoda HOM05D005607 ORTHO05D008142 2.2e-09 65.5 75 46.7
Cc05_g11730 Coffea canephora HOM05D005607 ORTHO05D008142 2.2e-09 65.5 57 54.4
PSO210G5410 Papaver somniferum HOM05D005607 ORTHO05D008142 2.9e-09 65.1 75 49.3
SalBow7G3213 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.9e-09 65.1 62 50.0
SalBow7G3521 Salvia bowleyana HOM05D005607 ORTHO05D008142 2.9e-09 65.1 62 50.0
Manes.03G105800 Manihot esculenta HOM05D005607 ORTHO05D008142 3.8e-09 64.7 75 49.3
Nn1g04204 Nelumbo nucifera HOM05D005607 ORTHO05D008142 3.8e-09 64.7 65 50.8
TWI38G0301 Tripterygium wilfordii HOM05D005607 ORTHO05D008142 5.0e-09 64.3 58 53.4
Sabra16G0259600 Salix brachista HOM05D005607 ORTHO05D008142 6.5e-09 63.9 62 54.8
Lj1A839T37 Lonicera japonica HOM05D005607 ORTHO05D008142 8.4e-09 63.5 58 53.4
PSO832G0774 Papaver somniferum HOM05D005607 ORTHO05D008142 8.4e-09 63.5 75 48.0
Rhsim06G0202700 Rhododendron simsii HOM05D005607 ORTHO05D008142 1.1e-08 63.2 58 50.0
Eucgr.F01169 Eucalyptus grandis HOM05D005607 ORTHO05D008142 1.9e-08 62.4 51 56.9
RcHm_v2.0_Chr5g0032701 Rosa chinensis HOM05D005607 ORTHO05D008142 1.9e-08 62.4 68 50.0
Prupe.4G175900 Prunus persica HOM05D005607 ORTHO05D008142 2.5e-08 62.0 51 56.9
CiPaw.11G167700 Carya illinoinensis HOM05D005607 ORTHO05D008142 3.2e-08 61.6 58 53.4
COL.COLO4_36717 Corchorus olitorius HOM05D005607 ORTHO05D008142 3.2e-08 61.6 60 53.3
Eucgr.F01141 Eucalyptus grandis HOM05D005607 ORTHO05D008142 3.2e-08 61.6 58 53.4
Oeu005401.4 Olea europaea HOM05D005607 ORTHO05D008142 3.2e-08 61.6 57 52.6
Potri.001G396500 Populus trichocarpa HOM05D005607 ORTHO05D008142 3.2e-08 61.6 62 53.2
FAN16G0865 Fragaria x ananassa HOM05D005607 ORTHO05D008142 4.2e-08 61.2 68 48.5
vmacro11890 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.2e-08 61.2 61 47.5
vmacro23190 Vaccinium macrocarpon HOM05D005607 ORTHO05D008142 4.2e-08 61.2 61 47.5
FvH4_3g19420 Fragaria vesca HOM05D005607 ORTHO05D008142 5.5e-08 60.8 68 50.0
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 9.3e-08 60.1 64 46.9
Migut.H01958 Erythranthe guttata HOM05D005607 ORTHO05D008142 1.2e-07 59.7 64 45.3
Lj1A839T35 Lonicera japonica HOM05D005607 ORTHO05D008142 1.2e-07 59.7 59 47.5
MD11G1253400 Malus domestica HOM05D005607 ORTHO05D008142 1.2e-07 59.7 51 58.8
Duzib170G0139 Durio zibethinus HOM05D005607 ORTHO05D008142 1.6e-07 59.3 60 48.3
MBI06_g04182_MAGBIO Magnolia biondii HOM05D005607 ORTHO05D008142 1.6e-07 59.3 70 48.6
CANSAT35G0745 Cannabis sativa HOM05D005607 ORTHO05D008142 2.1e-07 58.9 66 50.0
DCAR_017123 Daucus carota HOM05D005607 ORTHO05D008142 2.1e-07 58.9 46 58.7
Glyma.06G236100 Glycine max HOM05D005607 ORTHO05D008142 2.7e-07 58.5 52 55.8
MD03G1232700 Malus domestica HOM05D005607 ORTHO05D008142 2.7e-07 58.5 51 54.9
Lj3g0025006 Lotus japonicus HOM05D005607 ORTHO05D008142 3.5e-07 58.2 52 55.8
Medtr8g058790 Medicago truncatula HOM05D005607 ORTHO05D008142 3.5e-07 58.2 52 55.8
Medtr8g061280 Medicago truncatula HOM05D005607 ORTHO05D008142 3.5e-07 58.2 52 55.8
TPR.G28174 Trifolium pratense HOM05D005607 ORTHO05D008142 4.6e-07 57.8 43 65.1
VMungo1127G0827 Vigna mungo HOM05D005607 ORTHO05D008142 4.6e-07 57.8 52 57.7
Cfa020607 Carpinus fangiana HOM05D005607 ORTHO05D008142 6.1e-07 57.4 73 47.9
Cpa.g.sc131.86 Carica papaya HOM05D005607 ORTHO05D008142 7.9e-07 57.0 71 43.7
Ca_23036_v3 Cicer arietinum L. HOM05D005607 ORTHO05D008142 7.9e-07 57.0 52 55.8
MD11G1279000 Malus domestica HOM05D005607 ORTHO05D008142 1.0e-06 56.6 46 60.9
Lalb_Chr19g0134061 Lupinus albus HOM05D005607 ORTHO05D008142 1.3e-06 56.2 52 53.8
Gohir.A04G035700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.8e-06 55.8 60 48.3
Gohir.D05G347700 Gossypium hirsutum HOM05D005607 ORTHO05D008142 1.8e-06 55.8 60 48.3
Gorai.009G375500 Gossypium raimondii HOM05D005607 ORTHO05D008142 1.8e-06 55.8 60 48.3
arahy.Tifrunner.gnm1.ann1.K8QLTQ Arachis hypogaea HOM05D005607 ORTHO05D008142 3.9e-06 54.7 52 51.9
Nitab4.5_0002330g0110 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.9e-06 54.7 56 50.0
Nitab4.5_0008275g0010 Nicotiana tabacum HOM05D005607 ORTHO05D008142 3.9e-06 54.7 56 50.0
arahy.Tifrunner.gnm1.ann1.3D346W Arachis hypogaea HOM05D005607 ORTHO05D008142 8.7e-06 53.5 52 51.9
Phvul.011G160300 Phaseolus vulgaris HOM05D005607 ORTHO05D008142 8.7e-06 53.5 52 53.8


User provided reference genes

Program Settings